Array 1 66475-66942 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPE01000007.1 Deinococcus radiophilus strain ATCC 27603 NODE_7_length_102138_cov_125.199910, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 66475 37 100.0 35 ..................................... AACCTCATCACCATCAGAAAGGCCGAGAGATTTAA 66547 37 100.0 35 ..................................... AGCTTGGGACACCCGACCCGCAGCCAGATCACGGT 66619 37 100.0 32 ..................................... GCTTTGCTTCCGCTCACGGCTCAGGCGTTCGG 66688 37 100.0 35 ..................................... ACGTAATGCTCAAGATGCACCCGGTTATATATCGG 66760 37 100.0 36 ..................................... TGGACATCTCCGACCTGATTAGCGCTGGAGACCTCA 66833 37 100.0 36 ..................................... CAGCTCGGCGCGGCGCTGTGCCAGTTCGGCGTCGGT 66906 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 7 37 100.0 35 GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGAAAC # Left flank : CTGAGCGGGCGGGGTGGCAAGGGCGTAGCCACCTCCTTCGGCACCGTTGCAGCGCTCTCCCCTGCCATCGGCATCTTTGCCTTCGTCCTGGCTATCTTTACCATGTGGCTGACCCGCTTTGTGAGTGCCGGCAGCATCATCGGAGCGGCAGCGGTACTGGCGCTGCTGGGTTTCAGCTATCTGGTGCAGCTGCCCCCACCCTGGTATGCCACCGCCGCACTGGCTTTTCTGGCTTCGCTGCTGATCTGGCAACACCGCGACAATATCAGGCGGCTGACGGGCGGGAATGAGCGGCGCTTGGGCGAGAAGGCGTAATGGTTTCTGCGCGAACCTGCAGTACACGGCACAACCCCACCCCTTTCGCGCAACCCGAATTGTCCCACTGGCACGCCATCCGCTAACGCAAGAGCAATGGCGTCATCTGGCCAAAGTCAATTCACAATAGGGCTCGCGCAAATCGGGTGATTCCACGCCTGCAGCACGGCATTGATAGAATGACC # Right flank : CAAATTCTGGGCTGGTCATCATGTCGTAACGGTTGCTGTTGCACCTGGCCTTCGGGCTGAGGAACGCAATCCTCCTGCTTCGGCGGCACTAGCATGAGCCCATGCCCGAGCTGCCCGAAGTCGAAACCACCCGCCGAAAGATCGCACCGCTGGTCACAGGCCGCACCGTGCTAGAGATTGAGCATTTCAGCCCGGACAAATACCCGGACACTGAATTGGCCCACGGCCGGATCATTAGCGAAGTGCAGCGACGGGGCAAATACCTGATTTTGCCACTGGCCGACCAGGCTGGCGGGCCTGCCGATTACGAGCTGATCGTGCATCTGGGCATGACCGGGGGCTTCCGGCTGGAAGAGACACAACATACCCGCCTCACCTTACGGCTAAATGACGGCGCGCTGCATTTCCATGATCCCAGGCGTTTCGGAAAAGTGCGAGTGGTGCGGGTAGGCGACTACGCAGCGCTGCCCACCCTGGCAGCAATGGGCCCTGAGCCGCTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCTGGCCTTCGGGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA // Array 1 4240-5356 **** Predicted by CRISPRDetect 2.4 *** >NZ_RXPE01000013.1 Deinococcus radiophilus strain ATCC 27603 NODE_13_length_62854_cov_126.994803, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 4240 37 91.9 35 .................................GCT. TGAATGTTGGACGCCCGGCCCTTCCTGACCCTGTT 4312 37 100.0 36 ..................................... AGCACGGCGCACAGCTCCTGCGTCGGTGCGGGCCGT 4385 37 100.0 36 ..................................... ATCGGGGGCCTCCCCAGCGGGGTAGAGATGCCAGAC 4458 37 100.0 34 ..................................... AAAGCTGAGCATCTGGCTTTTACCGGCACACCGA 4529 37 100.0 35 ..................................... AAGCCTTGCTAGACGATTTAGGCGATGCTTGCGAG 4601 37 100.0 33 ..................................... CGGACGACGGGGATTACCGTGTCAAACTCTGGA 4671 37 100.0 34 ..................................... CGGACGACGGGGATTACCGCATCAAACTCTGGAG 4742 37 100.0 36 ..................................... ATGCGGGAACGCAGTGCAGCCCTTGAGAAGGAATGC 4815 37 100.0 36 ..................................... TGGGTGGCCTGCTCGGCGTAGCGCCGTCCAGCCGCG 4888 37 100.0 36 ..................................... TTCTCCTTAGAACGTCAGCCCATCGGCAGCCATCGC 4961 37 100.0 34 ..................................... GTTGCTTAGGCCGTCCAGCACCCCAGCGACCCCC 5032 37 100.0 36 ..................................... AGCAGCGATTGTCACGCGGGCATAGCCTGAGCCGGT 5105 37 100.0 33 ..................................... TGGTTAATCCCAAAGCGGGGGCCAGTTTCGCCC 5175 37 100.0 36 ..................................... CAGCGCCTGCTCACGGGTGAGCGTGACAGAATCTGT 5248 37 100.0 35 ..................................... CGTTTCACCGACAACGGCTACGGCACCCGCACCGT 5320 37 83.8 0 .........................ACAA...C...A | ========== ====== ====== ====== ===================================== ==================================== ================== 16 37 98.5 35 GTTTCAGCCTGCCTTCGGGTGGGCTGTGGATTGAAAC # Left flank : CTATCCGCCGTATCTACATAGGTAGAGATGATTGACTTGCTGATTTGTTACGACGTGGCCACCTCGACCGAAGGCGGAGCCAAGCGCCTTCGCCGCGTGGCCAAAGCCTGCACCGCGCACGGCCAGCGGGTGCAGAACAGCGTGTTTGAGGTCAGCGTGACCGACGTGCAGCTGCTGCACTTGCGTCAGCGCCTGCTGGAAGTGATGGACGCCGACGAGGACACCATCCGCATTTACCGCCTGCGCCAGCCCCGTGAGAAATTTGTGGAGGCCTACGGCAAAGACCACTACACCGACTTCAGCGAGCCGCTGATTCTATAGCGCGAACCTGTGGCGACGGCCAAAAGCTGGGGGGTTCGCGCAAGCCAATCAGCCCGTGTGGGGCGCGAAGTATGACAACTCAGATCACTGTAAATGGCTGCGAACTTGCACATGCTGAGGGGGTTCGCGCAAACTGAAGGCGGGACGCCGTCTGACACGCCGCTGGATGGTGAACTGTT # Right flank : AACCATCAACGGAACAAACCAGGCGATGTTGAAACTTCTGATCGCCTGGCCTGTCGCGTCAAGTCTTATGAGCAGTGGTTCAGTCCACTACTCGGGCAGGTACGGTCAGATCACAGATGCTAAAGTCGGCGCCCCGCTCAGCGCGTTTCTGAGAAATCACGGCCTGGAATTCGTCACTCTGCGGATTCAGGATCTGCACCGTGGGTCGCTCATCTGCAGGAATATCAGCCAGTACACGGACCTGCCGCATGGTGTCGGGGTTGGCGGGCGGCTCGCCGGCAGTCAGTGCCCGGATGACGGGTTCGCCGATCACGGTGTTGCCCCAGGCCGTGTAGTCCAGTCCCAGTCGGAAGGACGAAGCGCCGCGCATGAAGAAGATCTCGCTGTTGGCGCTGCCGATGTCTTCGCCGCGTCCCATGCCTGCTACACCTGGACAGTACGCGCCCCAGGCCTGGAAGTTATCCACATCACGGCGGCGAGTTTCTGCGTCCGAGACAGTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGCCTGCCTTCGGGTGGGCTGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : NA //