Array 1 70765-67291 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHRE01000016.1 Pseudomonas stutzeri strain PS_138 NODE_16_length_102630_cov_20.3065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 70764 32 100.0 35 ................................ GCATTCGCTGGGCCGTTCAACCCATACATTCGCGT 70697 32 100.0 33 ................................ ATGGCCGACCGCCTGGTGCACCTGGCCATGGGC 70632 32 100.0 34 ................................ GTGCACTTGCAGCCCGAGGCGCTTGCGCTCCTCG 70566 32 100.0 34 ................................ TGCAGTCCGCAGTCACCATCAAGGAGGAAGGAAA 70500 32 100.0 35 ................................ CTTTCGGCAGTCGTGGCAGTACAGGGTCTGCCGGC 70433 32 100.0 36 ................................ GGGCGTAACCGCCGTGCTGCTGGGCGCCTACTGGGG 70365 32 100.0 34 ................................ ATTACTCATGCTCCTTGATTGTGGCCAGCGGCAG 70299 32 100.0 34 ................................ GAACCGGTCTTACGCGGCCTTGGCGCCATGTCGA 70233 32 100.0 33 ................................ ATTTGTGGGTAGCAGTCAGGATCACGACGGCAG 70168 32 100.0 35 ................................ TGCCGCACGGACGGCAAGCGGATCGGCCAATGCGC 70101 32 100.0 34 ................................ GCGACGAGGGCAACGTGATCCGCACCGACAACCC 70035 32 100.0 33 ................................ ACTCAGATGATCGCTCGGCTGATCGATTTCGCC 69970 32 100.0 35 ................................ GGCGGCAACATCAATGCTGCGGTAGATGCGCTAAT 69903 32 100.0 34 ................................ GACCGGGTTGTCCCTCCGCCATCCCGCCGCTATC 69837 32 100.0 35 ................................ TGGAGTCGGTACGGCTGAGCGATGAAGAGGCAAAG 69770 32 100.0 34 ................................ AACCGTGGTCGGCATGCTGTGCCGCTGCTCTCGC 69704 32 100.0 35 ................................ GCCATGCGCCAACGCGTGCGCAAAACCTCCGGCAG 69637 32 100.0 35 ................................ AGCACGCAAACGAACGGGCAGGACTGCTGCAAGAG 69570 32 100.0 36 ................................ CACGTCAACCATGGCAGGAGCAGCGGCATATTTGAT 69502 32 100.0 34 ................................ ACTGATGCCGGAGGTCACGAAGCGCCGAGAGGAT 69436 32 100.0 34 ................................ ACCTGGGCCAGTCGCGCCTGGATCGGCTCCAGCT 69370 32 100.0 34 ................................ CAAAGAAAAGCCAAACGGCATCATCGAACATTAC 69304 32 100.0 33 ................................ GCGTTCGAGAACCGCCTGTACTGGTTCAAGATG 69239 32 100.0 34 ................................ CCTCCTACAGCAGTCGGTCGAGCCGTCGATTCTA 69173 32 100.0 34 ................................ TTGTCTTGATTTCATCCGCTCACGGTACGCCCGC 69107 32 100.0 34 ................................ TTCGTCCTACTGTCCCGCCACCAGCTCAACCCGC 69041 32 100.0 34 ................................ AAGCGCTATGTGCGCGACGGAGGCGTCTCATACC 68975 32 100.0 33 ................................ CCTGACGACGGGTCACGATAGCTGTAATAGGTG 68910 32 100.0 35 ................................ TGCTGCCTTGGCAGCGAACCAGCGCGCCCCGGAAA 68843 32 100.0 35 ................................ TACGTGAACCTGAGCTATCAGCACGGCACTCGCAA 68776 32 100.0 35 ................................ GCCTGCAGAATCAGGCACTGGATAAACCAACACCG 68709 32 100.0 33 ................................ TTCCCTGCGGGCCTCATATATATCGGACCTGAC 68644 32 100.0 34 ................................ TCATCCAGATGGAGATTGAGAAGAAGAGCGAGAA 68578 32 100.0 34 ................................ CTCTATCCAGACTTCCATGCGGATTCGCTGCATG 68512 32 100.0 35 ................................ TTCTGCCTTCTCAATGCAGTCGATGCAAATGTAAG 68445 32 100.0 34 ................................ TTCGTCTCGAAGCCACTGTCATGCATCGCTGGCT 68379 32 100.0 36 ................................ AGCGGATTGGTCGTCTCGCGTCGGCTACAACGGATC 68311 32 100.0 34 ................................ CAACATCTGGCGGTCGCCCTGGTTGATCGCCAGC 68245 32 100.0 33 ................................ CTGGACGAAGACAAGCGCGGCGAGCAGGTGGAG 68180 32 100.0 35 ................................ ACCGATCTGTATGTTGCATTTGATGGTGATGGCAA 68113 32 100.0 34 ................................ CACCTACTGGCTGGACATTGGCCAGGTGGTGCAG 68047 32 100.0 37 ................................ ACTGCCTATTTGCGAGGCTATCGCAGCAGACTCCAAG 67978 32 100.0 33 ................................ ACCGGTACCGGCGCGCAGCTGGACAAGATTATG 67913 32 100.0 33 ................................ ATCAAAGGCGCCAGGTAGTCCCACAGTAAGAAC 67848 32 100.0 34 ................................ ATCACGGCGCTGTGCTTGGAGTTCGACGACATGG 67782 32 100.0 33 ................................ ACCCAGGTACGCCAGCTGGCAGTGCCGCAGCTC 67717 32 100.0 34 ................................ TTCGGCGGCGACCGCTCGCACGGCGTCGTGCTGT 67651 32 100.0 34 ................................ ATCTACGGCGACATCGCTCCGGCCGTGACTCCGT 67585 32 100.0 32 ................................ GTCCGCGTGCGCGACTCTGACGGCTACCTGAA 67521 32 100.0 35 ................................ GTATACCTCGGCATCACTCGCGACGCAGGCACCTC 67454 32 100.0 33 ................................ TTCCTCTAACTTCAACTATCAGCCCGGTCAAAC 67389 32 96.9 35 ...C............................ CTGTACGTGCAGCGCGTCCGCGACTACTGCGCCCT 67322 32 96.9 0 ..........G..................... | ========== ====== ====== ====== ================================ ===================================== ================== 53 32 99.9 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : GCCGTTCTTATGGAAGTAGGTGAAGCCAATGATGGTCTTGGTCAGCTATGACGTGAGCACGCAGGAAGCCGGTGGTGACAAGCGCCTGCGTCGCCTTTCCAAAGCCTGCCGCGATTTCGGGCAGCGCGTGCAGTACTCGGTTTTTGAAATAGAGGTCGACGCCGCTCAGTGGACGCTCCTCAAACAGCGCCTGTGCGATTTGATCGATCCCGAACAAGACAGCCTGCGTTTTTACTACCTCGGCAGTAATTGGCAGGCTCGCGTCGAACATGTCGGCGCCAAGCCAGTGCTCGATTTGAATGGACCGCTGATTCTTTGACTCAATTGCGAACCCAAAGCGGCCGATGAAATCCGGGGAGGTTCGCATTCTATTAACTTATTGAAATTTAAAGTTATTTTATTGGCCAGCCACCACCTAGACCAACAGATGTGCCTCTTCGACGCCGCTTCGCAAATTGACCAACTTTTCTTCCTCTAGCACAACGGGTTATAACCCCGCT # Right flank : TTCTGGCCCGTGGTGGCCGCTGCGCGTACACCACCGGTCGTGGGCGCACGGGATAAAACCTTAATGGCATTCCTGGCCCAAACCGGCCAGCGTCGCGTTCCACGAAGACACCCACAACACCGCGGAGGGCGCCGGCGCCGCCGCACTGGCTGCGGCCATTCAGGAGCGCGCGCTTAACGCGGGGGAACGCATTGCCGTCGTGCTCAGCGGCGCCAACATCGATCGCCGTGTGCTGGCGGGGATACTGGCGGGCCACGCGCGGTGTTCCGACTGACGTGTGCGATGCCAGCAAGGCAGAAGGCTGCCTGTTAAATCAGGAAACGAGTCCGTCGCCGCAGGCCATTCCCGTCTGGCCTGCACAACGCCATACTCGCGCCCGCCCGGCTCAGCGTGCGCCTGCGAGGCGCCGGCCGGGGCATCGATCGACAGACAGGTAGGCATCATGCAGGTAGCACATCCGGAAACGAGCCGCAGTCGTCTCGGCCAGTTCATCGAACGGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //