Array 1 19935-19084 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEIV01000048.1 Microcystis aeruginosa NIES-1211, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 19934 36 100.0 35 .................................... CTCGTTAGGAGACATCCCCGTTCGAATCAGTTCAA 19863 36 100.0 34 .................................... ATAGCGACTTTGTACGTTACCCCAATGATGGCTG 19793 36 100.0 39 .................................... AGCAATAGCGCGCTTATGACACCTAGCGAATAAAACGCT 19718 36 100.0 36 .................................... AGCTGGATAGCTGTTTGGATTTCGATGGCGGCACGG 19646 36 100.0 39 .................................... TTGCTGGTTTGATGTCCACAGCCCGACCAAAAATATGCT 19571 36 100.0 37 .................................... GAAGAAGCATCCCATGATAGGTGAACATGGATTACAA 19498 36 100.0 37 .................................... CCGATAATTTCGCCATTTTCAACTCTATCAGCTAAAA 19425 36 100.0 35 .................................... ACCAAAGTGATTTGGTAGTAGTATGTGAAAAACCA 19354 36 100.0 42 .................................... AACATTTTACTAGCGAAGGCTCGCCTCGTAAGAAAAAAACAA 19276 36 100.0 42 .................................... CCATAGAAGTTTTCCTGCCAAATAGCGTCCAAATTGGACACC 19198 36 100.0 44 .................................... GCGGCATCCTTTTTGTAACAATCTCCTTGGATAGACTCGAAGGA 19118 35 94.4 0 ...............................-...G | ========== ====== ====== ====== ==================================== ============================================ ================== 12 36 99.5 38 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Left flank : CCCCCCGCCTATCGGCACCCCCCTTATCAAGGGGGGCAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATTATAACCAGCTACTTAATTACAGATAATTACTTAAGCAAAATTAATTACACATCGAGAGGCGGAAACTGTACGCTAAAGTAGTAGAAAGGGTCAATTCTCAAGAGGATGATGTGCGCTTCTATGGGATTTCCGAAGAAGCTGTCTCTAGATTATTGGTGATGGGAGGTTCTCCTCCTCAACCACCCCCAAATCTCTACATCATCTAGCTTGTCCCCTAACTCTTGACTGAAAATCGATGCACCCCCTCCCCGACCTAAAACCCCGATTCTCTGGTTGAGGTGCGTCGATTGCTCTCCCAGTCAGGGTTCTACCCTTTGGTATCGGGACTTTTACCCCCCCCAGTACCACTTTTTAACCCTCTTTTTGCAGGTGCGTCGATTTGGGGGTCTGTCTTCCCCTCTCGATGAGACTTTCCAAGGGGTACT # Right flank : GCAGAAAAAGGGTTTCTAAAAGAAACCCTTTTTCTAATAAATCCTGGCAAATAAATAAGATAAAAAATGTCAAATATATCTTGACAAAAATCGATAAAAATGCTACAATTAGGCGTGATTGTTCGCTAAAACTGAAAACATGGTTAAGACAGTAATATGTTCAGCAATCCGTTAGGATTCCTAACAATAAAAAGTCATGGCAGTCTTAGAAATGCTCACCGTTCCCTTTTGCTCTCCCCTTGCTGGCAGCCTTGGCGAATAGATAATTAAAATAACTCAAATAGGACTGCCCTAGCAGTTCTTTCTAGGTAAAGTTGCAATTTTTAATCAATTGTTAAAATATTAAAAGGATGCTAAAGATAGCGGCTAGAGTTTCCAGAGTGAGCTATCCTAGAGATACTACTTACTCCATTCTCCCCCATGCTCGATCGAGTTCTCCATAGTCGTTATCAAGTCCAACAGTTACTGGGAAAAAAAACTATCTTAGCTAGGGACAGACA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 28128-28631 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEIV01000048.1 Microcystis aeruginosa NIES-1211, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================ ================== 28128 36 83.3 42 ...A.G.A....AT....T................. TAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACCCTTATC AA,A,C [28135,28145,28148] 28210 36 100.0 48 .................................... GGCTTCAGATAAACCACGCGTTGTGACTCATTCAAAGCGTCTCGCCAA 28294 36 100.0 38 .................................... GCCTCGGAAATTGAGGATAGGGAAGCGTGAAAGGGAAC 28368 36 100.0 39 .................................... AGTTTAGAAACGGTATATTTTGACATATAACCGTTCTTT 28443 36 100.0 39 .................................... AACTCTATCTCTGGACGGTTCCAGAAATAAGTATTTCTG 28518 36 94.4 42 ............A.....................C. TAAAAAAGTAGGGCTAATTCATGAATTAGCCCTACCCTTATC 28596 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ================================================ ================== 7 36 96.4 42 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Left flank : GCAATGGGGGGATAAAAGTTCTTTAATCAACGATAATAAAGTCAGAGATTTAACTCATGTTCATCCCTTTATCAAAGATGTTCGCACTATTGCTAAACAATGGATGTCCTTACAAAAATATATCCCTATAACTCCCGATAATAGTGCTAAATGGCGAGAAAGTTGGCATCCTAAAAATGTCGAAGTTTGGGGAAGAATTGCCGAAGATAAATATGATTCCCTAGCCATAAAATGGCTTCACAAAGCCTATCAAAAACTGGATAATTTAAGTATCTATAAAACCTCGGTGACAGGAATAGTAACAAAAAATATCAATCAAGTTGGTCGTCTTTGGCATCGAATGTATCCCAAAAATAATCATCAATACCTAGAATTATTAACAATTTTTCCTGATGACTCTGATGATTGTGCTTATTTTCTAGGTTTTCTAGACGAGAATAATGGTCAAGAGGGAAAATTTCAAAAAATTTGGCCGAAATAATCCCGTTTATAGTTAAGCA # Right flank : GCAGAAAAAGGGTTTTTAAAAGAAACCCTTTTTCTAATAAATTGTGTCAAATATATCTTGACAAAAATCGATAAAAATGCTATGACCCAACGGCAATCTTCGCTTTATTGCATGAGTAGAAAACGGGTTTCTTCGAGAAACCCGTTTTTTGCGATCGCTGGTCAAGAAAAAACCCGATAATTCAACCTATTCCCTCGGATCAAAATCCGGCAGCGTCCCCAACTTGCGAATGGTCACTTTAACATCCATAGACAAAAAGTCATCGGCATCACCAAACCAAGAACCGGAAAGAGGTATGATTTGACCGGGATGACGAGCGATCGCCACTCGAATTAAATCAAAGCCGGCGGTAATTTGATTAGTCGGATCATAATTACGCCAACCGGCCCCGGGTAGATAAACCTGTAACCAAGCATGGGTAGCGCCAGAGCCAGTCATCCCCACTTCACCACCGTCGAGGGCAGCATCGTAGAGATAGCCACTGACAAAACGACAGGCTA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.90,-4.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 26020-25541 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEIV01000009.1 Microcystis aeruginosa NIES-1211, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 26019 36 97.2 39 ............C....................... GGCAACTAATAATACTCAATAAAACGCAGCAGTATTGTC 25944 36 100.0 42 .................................... CTAAAATTATAGGGTAAGGTCTAAGACGATTCTGTTACAAAT 25866 36 94.4 32 .......................CT........... GTAGGGTTAATTCATGAATTAACCCTACAAAT 25798 36 100.0 37 .................................... GTTCATTAAGAAAAAACACAAACATATTAGGAGTACA 25725 36 97.2 37 ........................T........... GAAAAGCCTCTAAATACCGGTTCGCCCTCGACCTTAT 25652 36 83.3 39 C...........C............ATA..C..... GTCGGGCAGTTGAAAACTTGAAGTCGGGAGAATCCATTT 25577 36 83.3 0 ............C........T..T.A.TA...... | C [25555] ========== ====== ====== ====== ==================================== ========================================== ================== 7 36 93.6 38 GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Left flank : GACGGCCGCAAGGAGCCTAATACAGTTCAACTGTAACAAAACTCGCTCGTTTCTTACCTAGACCTTTGCCAGTCCGATAAGTGTCTTTCAGTAAACTGCCTCGACCCGCTGCGAGCGATTGTCTGATAGTTTCTTCCGCCAAATAATCCTAAAAGTGTCGCCCAGTAAGCATTTTACTATAGCTTTTTTCAGTCTGCTGAGGTACAAAATTTCTGGGTTTTAGGCAAAGGGGAAGAAAAATAGCTGTACCTCACTAGCTTAGGAAACGCCATATATAAGTACCTAAGCAAAATTAATTACACATCCAAATCGTCAGCAGTTACTCCGTCAGCTTTTTGCTGTGATCAGTAAACAGTGAACTAAAAACTCAAATCTGATCCCGTCTCCTGTCTCCTGTCTCCTGTCTCGACTGGGAAATTAATTTTGCACGACTACTTATTTAGGGTTTCCGGCAAAAAGTTTAAAGAAGATTTAATCGCACTGGTGGGAGTCGAGATTTT # Right flank : TGGGGTTAATGTAACATTACTATAAATATCTTGTCAAGTTGCCATTCAATCATCCTATAAAGTCGCCCTAAAAGGGCGAGGCTTTAAACCCAATTTTTCGGTAAATTAGCCATATAAACCGCCAAAATCTCCAGACTGTGGTAGATCGAGGGATTTTACCAGAAACCGAGGTTGTCTGCTCCCAACACTATCCAAAGCTAATAATAATCATAGAAAAAAATCTATACCACCAGAAACTTAGACAGGATCAGCTTTTGAAGCTTTTTAAAAAAAATCTTCAAAATATCGTGTTATCTCTAGCGGTTCCTAGTGCATATTGAATATAGTGGGAACATCGGTCAGCAAGGAGTTGAGGCGTTTATGGCCCTGGGATACTGGCAAGCGAAAATCTGGGGATTACTACACGATCCCGTCTTCAAGGCCCTACATAGCAACTCAGGACGCGGTGGCAACAGCTTCTGGAGAGATTTAGAAGTAATGAAGTTGTGGGGAAAACATAA # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTCAATTAATTTCTAAGCGCGAGTAGAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [13-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //