Array 1 1248149-1247712 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_UGQV01000004.1 Neisseria flavescens strain NCTC8263, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                   	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	==================================	===================================	==================
   1248148	    34	 100.0	    35	..................................	TATTTTTAAAACAATAGGGGGGTGGGTCTCTTGGG	
   1248079	    34	 100.0	    33	..................................	TGCTTACAAAAATCTTGTTTCTGATTCTCTTGG  	
   1248012	    34	 100.0	    33	..................................	CAGACGCCTGTTTTAGGGTCATATCCGCGCCGT  	
   1247945	    34	 100.0	    33	..................................	AGCCTATGAAAAGGTGGAAGCATTGGGCAAGGA  	
   1247878	    34	 100.0	    32	..................................	AAAGTCTAAATCTACGGTTTGGGTGGGTATGT   	
   1247812	    34	  97.1	    32	C.................................	TATTGCCTATTAAATCGCGTCATACCGCGTTG   	
   1247746	    34	  97.1	     0	C.................................	|                                  	G [1247715]
==========	======	======	======	==================================	===================================	==================
         7	    34	  99.2	    33	TCCAGCCGCCTTCAGGCGGCTGGTGTGTTGAAAC	                                   	       

# Left flank :   TGCACATGGGAATACAAAATGCTGATGCTGATTACTTACGATATTTCGCTGGAAGACGCGGAAGGACAGGCAAGGCTGCGACGCGTGGCGAAATTGTGTCTGGACTACGGCGTGCGCGTGCAATATTCGGTGTTCGAATGTGACATTGCGCCCGACCAGTGGGTTGTTTTAAAGGACAAACTTTTGAAAACCTACAACCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAAGTGGAACACCACGGCGCAAAACTGGCAGTGGATGTGTTTAAAGATACGTTGATTGTGTGAATCGCCAACCTACAGTTCTCATGAAAATGCGGCAGGGTTGGCAAATTGGGATTGTTCTTTAACAATTAGGATATTGCGAATGCGGGTGTAACGGAAAAGGCTGTGTTATACTCACGCTCGCGCTTTTCTTGGGAGCTTAGCGAGATTAGGTTTTCGAAACCTGATGTAGTAAGGCTTTTAAGAGAGGC
# Right flank :  CTATATTCACAAAAATGATAAAATATCTTTATGACTAGAAAATCCTACCCAACAGACTTAACAGATGCCCAATGGCAAGCGATTGAGCCGCATTTTAACCGGCTACGCCACTACAAATGGGATAAACGTGAATTAGTGAATGCCGTTTTGTACATTACCAAAACAGGTTGCCAATGGCGTATGCTGCCCAATGATTTTCCACCTTATCCAACCGTATGGAGTTTCTATCGCAGAGCCAACCAATCAGGCTTATGGGATAGGATTCTTTTGGCATTGGTTCAAAAAAACGTTTAATCCATCAAAAACAAGCGATGCCGACTTATGCCATTATTGATTCGCAAAGTGTCAAAACAGCTTCCGGCGCACATGATAAAGGTTTTGACGGAGGTAAAAAAATCAAAGGCCGTAAGCGACATATAGCTGTTGATACGTTGGGTAATCTATTGTCTGTTGTGGTCCATGCAGCCAATATTCATGACACAAAAGCAGGTATTTTTGCA

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCCAGCCGCCTTCAGGCGGCTGGTGTGTTGAAAC
# Alternate repeat :   CCCAGCCGCCTTCAGGCGGCTGGTGTGTTGAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCCAGCCGCCTTCAGGCGGCTGTGTGTTGAAAC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.90,-8.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.01,4.91   Confidence: MEDIUM] 

# Array family : I-C [Matched known repeat from this family],   
//