Array 1 210265-208102 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMQZ01000006.1 Lysinibacillus fusiformis ZB2 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 210264 28 100.0 37 ............................ TGCGAATTTTTGATTTTGACGATTTGATCAAGTCTAT 210199 28 100.0 36 ............................ ATTAGGTGGGGCTGTTGGTTACTTTGGTGGTAAATG 210135 28 100.0 37 ............................ AACATTGATGCACAAGTTGCAGCACTTGGAATGCAGT 210070 28 100.0 37 ............................ GATCGATGATAATTCGTTCGTATTCCGCGACATCCCC 210005 28 100.0 35 ............................ AATATTTTTGAGGTTTTAAATAATGTAGAGCAACG 209942 28 100.0 36 ............................ GATTTTCTTAAAACTAATAACTGACCAAAACGTTTT 209878 28 100.0 35 ............................ TCTGGTGGTCGTGATTTAGTTTTATGGGTTGGTGC 209815 28 100.0 36 ............................ GATGGTGTAGAAATCGTTATTCCGAAAGGCGGCATA 209751 28 100.0 35 ............................ TTTGACTTGCGAGTGTACGCTTTTGCGGCATTTAG 209688 28 100.0 38 ............................ TATAGTCAACTTATCAAAGCATTTCTTAATGAAAAAGG 209622 28 100.0 38 ............................ ATAAAACTAGTCGAGGAAATTTTTCAGAGAGTCATCGG 209556 28 100.0 38 ............................ TTCGAATTTAAGTATGTGCATATTTACGAGCGTATTAG 209490 28 100.0 37 ............................ ATCACGTTACAAGATGAGGTAACAGGTCAAGATGTAC 209425 28 100.0 36 ............................ TTTTCAAATTTGGGCGTTAGTAGGGCGGGGTTCTTG 209361 28 100.0 37 ............................ AATGGATTTAGAAAAGCAGTATGAGGATGATTTTGAT 209296 28 100.0 37 ............................ ATACATTTTAAAGGCAATTATTTGCGGCTTCACGCCG 209231 28 100.0 38 ............................ ACCAAACATGCAAGCTTGTATATTACACGGTATTTCAG 209165 28 100.0 37 ............................ ATCAATTAGCTGTTGCACTATTTGGTACAAAATTTGG 209100 28 100.0 36 ............................ TTTTGGTTTATGAAATAAAAGAGGTTGTGGTAAATC 209036 28 100.0 38 ............................ TTACGCTGTGTACGTGGAACATGGCACAGGAATATACG 208970 28 100.0 37 ............................ CTAGTTGGTCCTTTTGTTTCCCATCGAACTGTGGAAG 208905 28 100.0 37 ............................ TTTACTATTGATTGTTTAAGACTCGGCATCGCTTGCG 208840 28 100.0 37 ............................ TATCACTGCTGGGGACATGCTTGTTAGTGCGTTATTG 208775 28 100.0 36 ............................ GTAGTAACCGAAGACGCAGAACCACCGTAATCAAAG 208711 28 100.0 37 ............................ ATGACACCTAAATGGAAAGTGGAAGGTACAGACGATG 208646 28 100.0 36 ............................ CGTATTATCTTATCAAAGAATCGTAGTAACTTACTG 208582 28 100.0 36 ............................ ACGTCAAACATTAAAGAAACAGCATAAAAGTGAAGG 208518 28 96.4 38 ....................T....... AATGGCTCTAATGCTAATGCAAGCTCCCTTAAATTCCG 208452 28 100.0 36 ............................ GTTTCACCAGAGCGTGATGCTGAATTAAAGTCTGAG 208388 28 100.0 38 ............................ GTTCCAGAACGTAATTACTTGATGGAAAAAGGAAAAAG 208322 28 96.4 36 ....................T....... GGAGAATAAGGGCCAATATAGAGTACATCTTCAAAG 208258 28 100.0 36 ............................ TTTGTGAAGAAATCGACAGCTGATAAAGATATTTCG 208194 27 92.9 38 T...................-....... AAGTAAATAGGTTAGGAAGATATTGTCCAACTGAAGGC T [208170] 208128 27 78.6 0 A....T....G.-......C.......C | ========== ====== ====== ====== ============================ ====================================== ================== 34 28 99.0 37 GTTTTCATTAACTAAGTGGAATTTAAAT # Left flank : TCATTTTTTATTAACTATGTGGAAATTTACTTACTTCAAGTTCTTACTTTCTTAAAAAAAACTACAAAAGAGCCTACTTGAGACTATTTCGAGTAGGTTTTTTACATAGCTGATTACTTTTAGTAATTCTAACAAACTTCATTTAATTTCCTTTACCCTCTTCACTAAACGCCGATTACACATGATGAGGATGTAACACAAGTAAGGCAAATTTATAAAGCATGAAAATATTTAACATAGATACAAAACTCCCTATGAGAATGTGCTCGACATGAACTATTACTTGAATAAAATGGATTTTCTCCTCTTTATAAAAATTGCAGTGAATCATTTTACAACATTAAATCCCTTCAATGCTTTCCATGCCAAGCATTGAGGCACTTGAATAACAAAGGGAAATTTTCAAACTACAGATTGACTGCAAAAAAATGATATTAGTCTCAAAGTACAACCTGATAAAGCGTTGAAAAATAAGGTTTTTTTGATTATGCTTAAGGTGG # Right flank : CCTTGCAATCTATTATTCGCTAAAAAAACCAACAACAACCCAATCCCCTCGGTCATTGCTGGTTCTTTTCATTTACATTATTTCTTGCGTTTCACAAATACAATAACAAAAATAGCGGCTAGTGCTGCTAGGATGGCGATCATCCATACTGTGTTTGAGTTGGATGTTGTGTCATCTGCTGCGGCTGCTTGTTGCTCTTCTTTTGGAGTAGCGTTCGAAGACTCCATTTCTTTGGCATCCTCTTTCACCACTTGTGCAGTGCTAATTTGCACATATTGTAGTGTTGCTTCATTCGAGGCGGATGCTTCATGCTCGTGGCTGTCGCCATGGCCTTCTGCATGATCCCCATGGCTTTCCTCTTGCCCACCGTCATGTCCATGATGGTGATCCGCTCCTGTTGTAAAAATAGAACGTTCTAGCTGTTGCCCTACCCAGCTTTTGGCATCTGTTGAATCGGCAAAGATGCGAGGGTGTCCTGACAGCATGTATGTTTTACCGTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCATTAACTAAGTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 221145-219433 **** Predicted by CRISPRDetect 2.4 *** >NZ_AMQZ01000006.1 Lysinibacillus fusiformis ZB2 contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 221144 29 100.0 35 ............................. ATTTCGAGATTGCCAGATGGTTGAGTAAATGCTCC 221080 29 100.0 37 ............................. GAAAAAGTTAGAGGATAAATCAACAGCATTAATGTTT 221014 29 100.0 37 ............................. TTACCTTGCCGACTGTCGTATCGATTGCATTGGTAAT 220948 29 100.0 35 ............................. TGTTTGGTATATTTATAGACTCCAAAATATTCATG 220884 29 100.0 35 ............................. TTTTGTCGGCTATTCGTACTCTTAGCGCTATTTTG 220820 29 100.0 35 ............................. TTAAAAGCTGTGATGATTTCACGCCATCTACGCCA 220756 29 100.0 35 ............................. GGATGCAAAGCCGGAGCCTAAACCGCAATCTAAGC 220692 29 100.0 36 ............................. GCTTGTAATCAAGCTAAATTAGAGTTAACAGTGCAT 220627 29 100.0 37 ............................. ATAACAACATTGTTAATAACACAATTATATCCTACTC 220561 29 100.0 35 ............................. TCTGTTCCCCCAAAAATTAAAGCTTTTCGGTTAAA 220497 29 100.0 34 ............................. TGGATGTGCAGGCGCAGCAAAGACCGCGAGTTAC 220434 29 100.0 36 ............................. GCACGATCTAGCTTTTCTTTTTCCCAGAGCGACAAC 220369 29 100.0 35 ............................. AAAACGTTTGATTCTGATGTAAACGAAGTCACTCG 220305 29 100.0 37 ............................. ATGGTCGTCATGGTGGTATTGGTAACCGTGCAGATGA 220239 29 100.0 34 ............................. ACGTTAGCGAATTGCTAGCGTTTTTTCTTTTATA 220176 29 100.0 34 ............................. ACGGAGGAAAACAGGTGCAAGTTGAAACTCCTAG 220113 29 100.0 34 ............................. CTGCAAGAGAGAAAATACTTGAAATGCTTGAATA 220050 29 100.0 35 ............................. AATGATGTAGATCAGAGACATCCAACGAAACCGAC 219986 29 100.0 37 ............................. GAGGATTGTAATGCAAAGCAAGCTAGATAAAATCAAT 219920 29 100.0 39 ............................. TAAAACCGATTCTACGGTTAAAGATACCACAAATACTGA 219852 29 100.0 36 ............................. TAACACGACATCCAGACAAAAAGCAAGCTAACGTTA 219787 29 100.0 37 ............................. GGAAGGGAGCAGTGATTAATTATGGCCTCGTATACTA 219721 29 100.0 35 ............................. CATACATGGTAGAAATAATTCCAGTAAAGACCTTT 219657 29 100.0 34 ............................. TTAATCGGTATGGACTACCCACCCTTTCGTGATA 219594 29 100.0 37 ............................. GCTTGCCCAATCGTTGATGCTAATGTAGCCATGTTTG 219528 29 96.6 38 ............................A AGAAGCTACCCATGCCAGAAGTTAAGTCAACTATATTG 219461 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 27 29 99.9 36 ATTTATATTCCACTTAGTTAATGTAAAAC # Left flank : TCAATCACACAATTCTCAAGCTGTAAATCGCCTTTCACATACAGCCCCTGCCCTTGCCGGAACCGTAAATTACGCATCGCGACAGGTGTTTGATAGCGAATAAATACGCCACCCTTGATGGTCACATTGCCAACCCCATACAACGTCAGCCGCTTGGCAATATCCAAGCTTTCCTCATAAATCCCATCCCGAATTTCAATCATATCCCCAGGCGCCGCCTCTTCAATCGCCTGCCCGATACTTTGATAACGATGCATAATACTCCTCTTCACCACAAGTACAGCCATTTACACACTCCTAACCAAAAAATGTTCGTACCCTATTTATATACCGAACATGCTTGTGCTTATTCAATTTTGTGTAAAATTGCTGGAATATGCAGGCGTTTATTTGGAATGTTTGACGGTTTAATGAAAGTGGGGTGGTTTTAGGCTTAAATATGAAAAGCGGTTAAGGGTATGCTGTTCGTTTTTTTGGTTGGTATCGGGGTTTTAGAGTCT # Right flank : CACCTTAAGCATAATCAAAAAACCCTTATTTTTCAACGCTTTGACGGCTTGTAATTTACGACAAATATGATTATTTGCAGTCAATCGGTAGTCCAGAAATTTGCCTTTGCAATCAAAGTGCCCTCAAAGCTAGGTATGATATGCCTGGAAGGAATATTATGTTGTAAAATGATTCACTGCAATTCTACTAAAAGAGAATTTGAATACGATCGATACTCACTTTTCTAGTCTTTACTAATAGAATAGATGACTATAAAAACATGCTCTCAAAATCTTTCTCGACCCCATACACAGTTTTTTTCATATTTTTGGGATTGGCAATTCGGTAAACATAAATTGAATCAATATTCGGATTAGCCTTTGTTGCTAATTCAGCAAGGCATTGTTTTAAAAGTCCTTCAGTAATTTCTCCTTCAAATAAAGAATTTTGTGTCCACGTTAAATATTTTTTCAATACTTTATGGACTTTTCCCACCCGTTTCACATCCACATCATACGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTATATTCCACTTAGTTAATGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //