Array 1 97859-96968 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHYO010000006.1 Streptococcus pyogenes strain 31166V2S1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     97858	    32	 100.0	    35	................................	TGACATCTATAATCCCTAGCTTTCCTTTGATACGA 	
     97791	    32	 100.0	    35	................................	CAGATATTAAACCATTCTTACCACCACCACGTCCC 	
     97724	    32	 100.0	    33	................................	TGTATCAACGCAGCCGACAAATACACATTTTAA   	
     97659	    32	 100.0	    34	................................	AATCTCATAAACAGGGGTATTTGATTTGAGGGTC  	
     97593	    32	 100.0	    34	................................	GATATGATACAGACGTCTGTCCTTGTCATTCAAT  	
     97527	    32	 100.0	    34	................................	AAGACGTGTATAAATTACACACAATCAATACTAA  	
     97461	    32	 100.0	    34	................................	AAGTCATCACGTAAATTTTGCAACGCTTCATCTG  	
     97395	    32	 100.0	    33	................................	CATCTAAAGCATCTGATCGGTTTTTAAGCTCAT   	
     97330	    32	 100.0	    33	................................	TGTATAAATTGCGAAAAGAAAAAGGAATTTCAC   	
     97265	    32	 100.0	    34	................................	ATTTAGTCGCCAACTTTAACTATGATCAAACTTG  	
     97199	    32	 100.0	    36	................................	TCTGAAGTTAAGACCTTGTCCAGAAGCCAAACCAAG	
     97131	    32	 100.0	    33	................................	GTCGATAATGGCTTGATGATCACCTGAGAAAGT   	
     97066	    32	 100.0	    35	................................	TCCATTTTTTACTTTCTCATGTGGCAAAACATAAT 	
     96999	    32	  96.9	     0	...............................G	|                                   	
==========	======	======	======	================================	====================================	==================
        14	    32	  99.8	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCTATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACTTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//