Array 1 810173-812141 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007646.1 Ligilactobacillus salivarius strain JCM1046 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 810173 36 100.0 38 .................................... TTTCTTTTCCATAATCTGTATAAGTCAACACTTCCTGT 810247 36 100.0 39 .................................... AACGGTACTAAAAAAGCATTTAGTTTTCCTGAAGTTGAT 810322 36 100.0 36 .................................... CCAATTCCTTCAACTCCATAAATTAAAATTTTCATT 810394 36 100.0 36 .................................... AGCTTCAATTTTGAAACATGTAATAATATTTAGTTT 810466 36 100.0 38 .................................... CTAGACTACCTAGTATTAAGTTGTCAAAGAGCGTACTT 810540 36 100.0 39 .................................... AACACTATTGAACACTCTAAAAGAGTCATCCATCTTATC 810615 36 100.0 36 .................................... ACCTTGGTGGTGTTGATGGTTTAGTTCACGTTTCTG 810687 36 100.0 40 .................................... CTTCCAAAACTTTGATACGTTTACCTACTGCCTCAGTGAT 810763 36 100.0 40 .................................... TTGAAACATAATTTAATATTAAGTTTTTTTAGAACATTTT 810839 36 100.0 39 .................................... TTGAAGTAGATTAAATTATTAAGTTTTCATAGAACGTGT 810914 36 100.0 39 .................................... AAAACTTATCACTTAAATGTACTTTTTAAGTACATTTTT 810989 36 100.0 35 .................................... CTCAATTTTATTGACGTACTCAGTACCGCTTTTAC 811060 36 100.0 37 .................................... CCGAAGCGGGATATAACAATACATTTACACTCTTAAG 811133 36 100.0 37 .................................... TCATTGAAACTCTTAACAAACTTTTTCATAATTTTAT 811206 36 100.0 38 .................................... GCATAAGATTTTCTTGTCTATTTTTTTAACCCATTCTT 811280 36 100.0 39 .................................... CGGGGGATACTTCCAAACATATTTAAAAATTGACTAATT 811355 36 100.0 38 .................................... TTCATTTATTGAACATCTTTATTTAATCATATGCTCTT 811429 36 100.0 38 .................................... ACCAAATCTTCTTCTGTTAGTTCCCAAGCCTCTTTACC 811503 36 100.0 39 .................................... GCTCCACTTGAAGCTTATCGCACTCAAGCCAAGCAATTT 811578 36 100.0 37 .................................... GGTTCATCTACTTGTTTGAATGATTTTACCAATTTCA 811651 36 100.0 42 .................................... ACCCCATGAGGTTAGTTGCATAGTATTTATACCCCCACCCCC 811729 36 97.2 34 ...................G................ TCTATCTTCTGGCATAAAGATTTCATAACCTACC 811799 36 100.0 39 .................................... ATCAAGCTCATAATTGAAATTGTTGTAAAAATTAATGCC 811874 36 100.0 42 .................................... TTCGTTCATTAGGTTTATCAATCTTTCATCAAATTTCATTTT 811952 36 97.2 41 ...............T.................... TTACCACCAGAAAAAGCAACTAAGATATTATCAAATTCATT 812029 36 97.2 40 .....................G.............. CCTGCTGTTGTTAGTTCGATCATTTTTCTTCATCCTTTCG 812105 35 88.9 0 ............................-....TCT | TT [812135] ========== ====== ====== ====== ==================================== ========================================== ================== 27 36 99.3 38 AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Left flank : CAGGATTGAAATTACCGACTTTCATTGAGGAAGGAAGATAAGTATGATGCTATTAGTATGTTTTGATTTACCAAGAGACACGAAAGAGAATAGAAAAGAAGCAACTAAATATCATAAGAAATTAGTAGAATTAGGTTTCACAATGAAGCAATTTAGTGTGTATGAAAGAGAAGTAAGACAAAATTCTACTAGAGATAGAGTAATTAAAGTGTTAAAAGATAGATTACCTAAATCAGGTGCAATTACTTTATATTTACTTCCTAACGAAGTAAATGATTCACAAATAACGATTTTAGGAAGTGAGTCTATAAAGAAAACTGTTAGGAAACCTCAATTTATTGTGTTATAATACACTTACACTGCTGTAAGAAACAGTAGTACAAATAAAAACTTGTCTGAATTTTGACCAAATAATACTTATTAATTTGACCTATTGCCCGTTTAGGGTACCATTAAAAATGTCAATAATTGTTGATATATCAACTAATTGATCAAAGAGT # Right flank : TAATTAAAGTGATAAGAAGGAGAGTAAAAGTTAGAAAAAATAATATATAATATAGGTAATTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCATGTATTGGTGATACAGATCCTATAAGAAATAGGCATGATGGAGCTTTATTGCATTTAGCAAGAGTATTTCGCCCTGAAAAAATATTATTAATATACTCTGAGCGTGCTTTACTAAAAGAGAATAATATCTTATTAGCGTTAAATTCTATAGAAGGATATAATCCTGTAATAAAAAAAGATGAGAGATTTATTTCCAATAGTGAAGTATTTATTTTCGATAAAATGTATGAAATATTAAATAATATAGTTTTAAAGTATTCTAGGGATGATGAGGATTTAATTTTGAATTTATCTAGTGGAACTCCACAAATGAAGTCAGCTTTATTTACTATTAATAGATTGAATGATATTAATGTCAGAGCCTATCAAGTAATAACACCTAGTCATTCTTCAAATGAAGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTAAGAACATATCTCCGAATATAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //