Array 1 304638-301512 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAVWW010000004.1 Clostridium gasigenes strain CGAS001 contig00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 304637 30 100.0 37 .............................. TTTAGAACATTAAAGATTTTAAATATTAATTCTCTAT 304570 30 100.0 36 .............................. TAGCAAGAATGACAGAGGCACAAATAAGTTTAAATA 304504 30 100.0 35 .............................. ACAAATAGTATATGGGAATAGTTATACTTGGATAG 304439 30 100.0 36 .............................. AATTCTTAAACATAAATAATTATGCAATCTTTGCTC 304373 30 100.0 35 .............................. TATTTCTATTTAAAGGTATGGATGATCCGGAAAAG 304308 30 100.0 35 .............................. GCTGTTGGTTTAGTTGGTATAGTATCTTTCTTAGG 304243 30 100.0 35 .............................. CAAAGTTGTAAAGACCTGTGGACAAAATAAAAAAG 304178 30 100.0 36 .............................. ACTGATATAACTCCGGCTAATGCTTATACGGCGTTT 304112 30 100.0 35 .............................. TTATGATTGGTTTTTAACTGGTGGAGGATCTATTG 304047 30 100.0 36 .............................. TTAACATCTGTTCCTACTTCGACTTCAATATTTATG 303981 30 100.0 37 .............................. ATTGTTTGTACTCCATTGTAGCTACATTGTACCTATG 303914 30 100.0 36 .............................. TAGATATTAAAGGTAAATTATATGACCACTTTAAAA 303848 30 100.0 36 .............................. GTTGGAGCGGGTTACTTAGCAACTAAAGAAGCAGTA 303782 30 100.0 35 .............................. GCTACAATGCAATCTGCATATTTTTGTATATTTAA 303717 30 100.0 36 .............................. AAAGATTGGGACATAAATTAAGTACAGATGGTGGAA 303651 30 100.0 36 .............................. GAATTCAAGGAGCAGATGGCGCTAAAGGAGATATCG 303585 30 100.0 36 .............................. TGTGTTATTATTGTCTTAGGAAATAAATTACAGAAA 303519 30 100.0 36 .............................. AATTGAAGCAACTCTTCCAAACCTATTACAATAGGA 303453 30 100.0 36 .............................. ATTACTTTTACAAAGCCTTCAAATAGTGGAATAACT 303387 30 100.0 36 .............................. ATTACTGTTTTAATAATATAAAACATAGGTACTTTG 303321 30 100.0 36 .............................. GAAGATATTTTAATATCGTATGTACTCAAAGCCGAG 303255 30 100.0 36 .............................. CTAGGAATAGACCTAATAACACGATGCCTAAGCATT 303189 30 100.0 36 .............................. TTCCTTAGTACTTGCATATCCCTTATCTTCTCTAGT 303123 30 100.0 36 .............................. CCATGAAGGTTCATTAGATGCTAAATTTAAGTATTG 303057 30 100.0 36 .............................. TAAGAAACAAGATATGTTAAAAAAACTTACAGAACA 302991 30 100.0 36 .............................. TAGTTTGTATATTAGGCTTAACATAATCTTTTATAT 302925 30 100.0 37 .............................. AGTAATAAATCTCTTTCTTTTCCATAATTAAAGGTTG 302858 30 100.0 36 .............................. ACTGGAATTATTCTTGTAAGCAAACTATCTGTAGAT 302792 30 100.0 36 .............................. CAAGATAATCTATAATTTTTTTTTATTTTACCTCCC 302726 30 100.0 36 .............................. TAAATTAAGTCTGTGGTTGCATCACAGTTGCCAGGG 302660 30 100.0 36 .............................. AATAGTAATCAAAACAATTTTGGTGGAGCTAACTTT 302594 30 100.0 35 .............................. TTAAATAACTCTACCCATATCTCCATTACACAAGT 302529 30 100.0 36 .............................. AATTCTAACACTCCTCGAATTGTTATTCAATTGCGT 302463 30 100.0 36 .............................. ATGCAATTAAGATTGGCAGCAGGTTCCGTAACATTG 302397 30 100.0 35 .............................. AATAAAGAACCTCCGATTAGTAGTACTCCACCTAT 302332 30 100.0 36 .............................. TAAAGAATAACATCTTTATCCTGATAAGAAATCATG 302266 30 100.0 36 .............................. GAAGAACCAGAAAGGAATACTTGCGAGATAGCAAAT 302200 30 100.0 36 .............................. TGACCTGCAACATATCCAACATTTTTATATCCAATA 302134 30 100.0 36 .............................. ACATCTGTAAGCTTAACTTCAAAATTCTTTCTTGGA 302068 30 100.0 35 .............................. TGTAGTTGCTTCATTCTATAAGTAGCAATATAAAC 302003 30 100.0 35 .............................. GCTGCTATTCCTTTGTTTCCACTCGCTGCATAAGC 301938 30 100.0 36 .............................. ATCATTGCAACTACTAGACATACATTATAGCTATTA 301872 30 100.0 37 .............................. GATATATAAGGCTTGGATTAGTAATATTATTTTGGTT 301805 30 100.0 36 .............................. GATTTAAAGTCTGATACAAACTATAAACAACTAATG 301739 30 100.0 36 .............................. TTTGAAGAAACGGTCGCAAAAATAAGTACATTAGTA 301673 30 93.3 36 ....A...................A..... AAGGCATTTAATATCCTTAAAATCTGAAATAAAAGC 301607 30 96.7 36 .................A............ CCTAGCACATGAAGGTTGTCCCAAAGTGCAACAATA 301541 30 86.7 0 ..........G................GCA | ========== ====== ====== ====== ============================== ===================================== ================== 48 30 99.5 36 GTTTTAATCTATCCATAGTGGAATGTAAAT # Left flank : TAAAATGTGGTGGTAGGGGAGGTTTTAATTAGATGTATGTTGTTTTGGTATATGATATAAGTGGAGATGATGATGGGCGGAAAATATTAGGAAAAGTGTTTAAGATATGTAAAAAATACTTAACTCATATTCAAAATTCTGTCTTTGAAGGAGAGTTGACAGAAGGTCAAATAGCAAAATTAAATGCAGAATTAAATAAATTTATTAGAAAAAGTTTAGATTCTGTGATAATATTTAAGAGTAGAAATGAAAGATGGCTAAATAAAGAATTTTGGGGAAAACAAGATGATGCGACATCAAATTTCTTTTAATAATAATAAGTTGTCGATGTGACATAGTGCTAAAAGAGTACTAGTTAGACAAAGCCTTTGTTATTAATGGTCTGAAGTTATAATAATATAATTTTAAAGTGATAATATGTGAAATATATATATTGTAAAAGTACATCGACAAAAACAAACCCTGGAATGGTTGGTAATACTAGCTATTATTGTCGGTCT # Right flank : ACCTAAGGTCAGGGACTAGCCCTTTCTTCGGCAGCACCTCCGATGAGGAGATGATTTCCAAATAGCAAGCCATAAGTCTATCGGACGAGCCTCCAGACTTGGCTACTACCCCCGCGAGTTTTTAATATTTACAGGTATAAGCATCTAAAAGCACTATGATTTTTATAGTGTTTGGTGCATTTTGAAATAGGATAATTTGAATAACTTAAAAGAAATATACAAATAAAAGGTGTTGCAATATTGAAACACCTTTGCTTTAGGTTATTGGAAATAATTGTTCGCCAGGGGAACTAGAGGGGGATGAAGTCACACTCTTAGGATTTTTCAAATGGTGTGGAACAACATAATTATATATGGGAGAAACTTGGTGGGGTAGAAGGGAAGGCAATTAGTTTAAAATAGTAGCAGAAGCTGTTGATAATAATTTTGGGGCTTTTATGTTATGAAAATATAATCACTACAAGGGTATAACAAAACGGTATACCATTTATAAAGCCTTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATCTATCCATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.20,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //