Array 1 1258209-1261411 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP068112.1 Mobiluncus curtisii strain FDAARGOS_1128 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1258209 29 100.0 32 ............................. TTGTTTCATGGTGTTCCATGAGGTAATAAAGA 1258270 29 96.6 32 ............................A AACGGCTAAATACCAACGAAACGGGGAAAAGG 1258331 29 100.0 32 ............................. CGCCGAGCAGATAAACCGCTGGATGGTAGAAG 1258392 29 100.0 32 ............................. CACACCCTCGCCATCAGCACCGACGGTAGCAC 1258453 29 100.0 32 ............................. ATCGACACGCCGGGATAAATGGTTAATTCTCT 1258514 29 100.0 32 ............................. CACGCTAGAGAGCTGCAGACCGGCTCACAAGA 1258575 29 96.6 32 ............................T AATTTGGCGCGCCGCGCCTTCGGCGCCGGCGG 1258636 29 96.6 32 ............................G CACGCTTTGGTGAAATGTGGCGCCGGCGATGT 1258697 29 100.0 32 ............................. TACTACCAATCTGGGCGGGAGCCCTCGACCCT 1258758 29 100.0 32 ............................. TCATACTGTCTCCCTATCACTCCAATAGGAAA 1258819 29 100.0 32 ............................. ACGGTTAACCTTTTTATCCCGCATAATGTCGA 1258880 29 96.6 32 ............................T CTGCGTCATGCCACCGCCGATGTACTTATCCC 1258941 29 100.0 32 ............................. CCGGCTGGGGGGTGGGGCTGCGTGATGGCAGT 1259002 29 100.0 32 ............................. AGCCCGCGAACGTTTTCACGGCTATGGCTATG 1259063 29 100.0 32 ............................. ATCAGCGCGGCTGCGTCACCCCCCGCCTGTAC 1259124 29 100.0 32 ............................. GGGGGTATCCGTACCCGAACTATACGGGCGAG 1259185 29 100.0 32 ............................. GCTCAGCGCCGGATAATGTTTTCATTCCTTCT 1259246 29 100.0 32 ............................. AAATCTCTATCCCCGGACGCTCCGGCAACCTA 1259307 29 96.6 32 ............................G TCCTCTCAAACCCGGTAGGTGCGGTAAGCGGT 1259368 29 100.0 32 ............................. CTTCTGCCTGCCTGTACCGCGGTTTCGTTCGT 1259429 29 96.6 32 ............................T CCGAGCGGGTAAACGATAACGAGGGCGCTTTG 1259490 29 96.6 32 ............................T GATTATGAGCCAGCGGGATCCAAAACCCTTAC 1259551 29 100.0 32 ............................. ACGGCAGGGATTCAACCCAGGCTGCGACCGCG 1259612 29 96.6 32 ............................T AGCAGCCCGTACCTGGTTCTCTAAAAGCTCAA 1259673 29 96.6 32 ............................T GTTCTTGGCTGAGAAATGGAAGAAACGCCTTG 1259734 29 100.0 32 ............................. CTGGACACGTGCAGATAATGCGCCATGTTCTT 1259795 29 96.6 32 ............................T ACCTCTACAGCCTCGGTGAGGCTGATACCTAG 1259856 29 100.0 32 ............................. GTCTCCGTTTGGTGAAGAATTGCCAACCGGGT 1259917 29 100.0 32 ............................. ACGCCCGCAACCGACAACTAATCGAAGCCAGA 1259978 29 96.6 33 ............................G GCGTCGCAGTACGAATTCGTATTCGGTGGTTTC 1260040 29 96.6 32 ............................G ATTGCCTAAAGCGCTGCTGACGTGCAAAGTTA 1260101 29 100.0 32 ............................. AACGGTGGCTGTTTTGGTGCTGGTATTGCCCA 1260162 29 96.6 32 ............................G CTCACCGGCTTTAGCCATAGCGTCGCGGGGTG 1260223 29 100.0 32 ............................. CCGGACAGGGACTTTCACCTCATCATCAGACC 1260284 29 96.6 32 ............................T ATTTGCACATGGGAAGATTTGTTTAACGCGGA 1260345 29 100.0 32 ............................. ATCCAAATCAGATTCTCAGCCTGTTCCACATC 1260406 29 100.0 32 ............................. GTGCGTTGAAAACGTTTGCTCAGTCGCTTATC 1260467 29 100.0 32 ............................. ATGTTAATGCGAGAGCCCGACGGGGCAATCTA 1260528 29 100.0 32 ............................. CCCAACGCCTACCACGAATACAGGAAAACCTA 1260589 29 96.6 32 ............................T ATCGCCGCCGGCGGTAACCAGCTGCAGCTGGA 1260650 29 100.0 32 ............................. CCGAAGCCCAGGTCGCGTTCGACATCGCCAGG 1260711 29 100.0 32 ............................. CCCACTTCTCCAGAGTCTCAAAATAGAATCGA 1260772 29 100.0 32 ............................. CTATTTTGAGCAGGCTTTGATTCGTGGGTCTG 1260833 29 96.6 32 ............................G TAAGCGGGGAAGTTTATCCACCACCAGAGGGC 1260894 29 100.0 32 ............................. AAACGGGTTATAGCGCTACGCAAGGGCGCGGT 1260955 29 96.6 32 ............................G CGCTTATCGATGCAAAAGATTTTGTTGAAGCG 1261016 29 100.0 33 ............................. CATTGCACAGAACGGAACGCCACTTTTTCCGTA 1261078 29 96.6 32 ............................G GGCAAGCGCGGTTATTGCAAAACCACCGTGTG 1261139 29 96.6 32 ............................T GCGGTTCTCGACGAACTGGAAAGCGTGGGTGT 1261200 29 100.0 32 ............................. GAGCAAGACACCGTGCGAATGTATATTCAAGA 1261261 29 93.1 32 ..........................A.T GAGGGTCGCGTCTTGAACAGGGATAATTCTCA 1261322 29 96.6 32 ............................T AGGGGTTCGGATTGCTCCCACTGGTTTGTCTG 1261383 29 89.7 0 ......T................A.T... | ========== ====== ====== ====== ============================= ================================= ================== 53 29 98.4 32 GTGGTCCCCGCACTCGCGGGGATGAGCCC # Left flank : AGGATAGTGTGCTCCGATGATGGTTTTAAACGTGACTGCAGTTCCAGCAGGGCTTCGCGGAGACCTCACAAAGTGGCTAATCGAAATTGCGCCTGGAGTATTTGTCGGAAACCCTAGTGCGCGTGTACGCGATCTGCTATGGGAACGCACGGTAGCCCTGTGCAAAGATGGACGCGCTCTGCTGATTTTTTCGTCCAACAACGAGCAAGGAATGGAGTTCCGCACCCACCGCCACAGTTGGATACCCACAGACTTCGATGGGGTAACCCTAATGATGAGACCATCGGGGGATGGACAACAGTATTACTCGCGCAGAACCGGATGGTCTATAGCCAGACACCAGGGAAGAAAGCGCAGAGGTGTTTAGATTCCGTTCGGATATACAAAGCTCCTGCGGATACGGATTTGGATTGTATTAAGTACAGCACGGAACCGATTTCAGAAATTAGCAGTTGTATGTACACTGGTTAAATACGTAGTGAATTAGCTGTTCACTAAGT # Right flank : CAATGTTGCCTAACGTGCCTCTGTTCGGCGCTGCTGCTGAAGACCGCGCCAGTCTGCGCCAACGAGTCGTGGAAAAGCTCCAAACCCTGTTTGATCGCTTTTACGTGCTGTAAAGTTCTTTGCAATTTGCGCTGGCACGGTATTAGCCACAGTTTCTATCGTGTGCAGACTAGGCTCCGAAGGTCACAGAGATGACGAAATGTATTTCGTCGACTCCAGGTCATCCGTGACCTGTCCGTGAGTCGCGCAGGTGATTCCTGCTGATGGCGTCCGGAATTTGGTCATCTCTGTCAGGTTAAGAGTCTGATTTCGATGCATGATTAAAATTTCCGTCAGAACCGTCACTCTTACAGCTCACATACGCGGGAGAAAAATCAGCACACTTCACTTACCGAAACCAACGATGGGTGCTAGCTGCAATTGGACGGAATCATTGTGCCCAGAAGCGGGGTTGCTCTGCGTGTATCACCATTTCGTGCTGCCGGTCGTGCGGATTAGCC # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.93, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACTCGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGAGCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //