Array 1 78166-77174 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR722991.1 Brevibacterium sp. Marseille-P9724, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 78165 36 100.0 40 .................................... GGAACGCCCTGACGGTTGAAGCCGGTATCCATGGTGACGA 78089 36 100.0 40 .................................... AACAAGCCAAACACAACGCCCTCGAACACTGCCCCCGCTG 78013 36 100.0 39 .................................... CCATCCTGTGCGGGCACGTCCACGACACCTGGGAGAAAA 77938 36 100.0 35 .................................... GGCACTGTAGAGGTGTGGGATACCGATCCGCAGGG 77867 36 100.0 36 .................................... TCGATCTCTGTCACCACGTCGGTGACGCTTCCGCCC 77795 36 100.0 34 .................................... CAGATGATCTTGCGCTATGTGCGTGAGGCCCTAC 77725 36 100.0 37 .................................... ACCCGGTTAGCGGTTGCGTCGCGCTCCTTGCCCGCCG 77652 36 97.2 38 .......T............................ CCACAATCATGGCGGGCGTTCCTGTCCTCGCGAGGACA 77578 36 97.2 39 ...................A................ ACGTGTGGCGCGCCGGTCAAGGAGTGGCAGGAAAAAGCC 77503 36 100.0 37 .................................... TCGCAGGCGTACCCCGACCGACCGGCTGATCGCGGAC 77430 36 100.0 37 .................................... TCGCCACCAGCGGGGCCGGTGGTGCGGCGTAGCACCC 77357 36 100.0 39 .................................... GAGCGGCTACCTGACCGACTCCCGGCCTTGGGCGCGGCG 77282 36 100.0 37 .................................... ATGGCGGCAATGCGCATGCCGGTGAGGGTTAGCCACT 77209 36 91.7 0 .............TT...............C..... | ========== ====== ====== ====== ==================================== ======================================== ================== 14 36 99.0 38 CCCTCTGCTTCGTCAAGGAGCAGACTTCGTTGAGGC # Left flank : GATCCGCATTCGATGAGTTCACGCGATCGTATGAGGCGAACGCTCATTGCGTACGACGTTCCTGATGATCGTCGGCGTCTGCGTGTTGCTCGTTTGTTAGAACAGTACGGTGACCGCATTCAGTATTCTGTATTTGTGGTCGACCTGTTGCCGTCAAAGCTTCTGCAGCTTAAGAGTGGTCTGAAAGAGGTCATTGATCCCCGTGCGGATAGCATCCTTTTGTGCGATCTGGGTCTGGTTAAGACTTTGACTGAGGCAGACTTTTCCTACATGGGTCAGCAGCGTACTGTCACGCAGCAGGGTCCAATGATCCTCTGACAGTGTTGCGAGAGCAAGCTCAACGGTGAAACCCCGGGAACCTCTCGCGAGCTGTTTCTGCAGGTCACGCCGCCTTGCACGATTCAAGGTTACGGTTTCCCCTCTGAAAATTTCCGACAGGTTTGAAAGCTCTCGCCGAGCGTTCCGTTTTCCCAGGTCAAATGTGGTAAATATAGGGGGCA # Right flank : GAACAGATGCCCTGTGTATCCGTGGCTGGATCGGGAATTTTCCCCGGCGCCGCTCCGCTAGACTGGTTGATAGTTCAATCAACGCCCTCTGAGCTTAGGAGCGCACTGTGGAATTCGGAATCTTCACCATCGGTGATGTCACCCGCGACCCCGTGAACGGCACCATCCCGACCGAGCACGAAAGGCTGATGAGCACCGTGAAGATCGCCGAACACGCAGAATCCGCCGGCCTCGACGTCTTCGCAACCGGCGAGCACCACAACCCGCCGTTCGTCGCACCGGCCAACCCCGCCGTCCTCTTGGCGCACCTGGCAGCGCGGACCGAGAAAATCCACCTGAGCACCTCGACGACGCTCATCACAACCAACGATCCCGTCCGGCTGGCCGAAGACTACGCCTACCTGCAGCATCTGGCCGGCGGGCGCATCAGCCTCATGATGGGCCGCGGCAACACCGGCCCCGTCTACCCGTGGTTCGGTCAGGACATCCGCGAAGGCATC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTCTGCTTCGTCAAGGAGCAGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.60,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 327946-330536 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR722991.1 Brevibacterium sp. Marseille-P9724, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 327946 29 100.0 32 ............................. GGCTTGCCCAGGGCGCGGGCCAGTGCGGCGAC 328007 29 100.0 32 ............................. ACATCACCGACCTCAGCACGGCGGGCCTGCGG 328068 29 100.0 32 ............................. AAGACGTGCAGGACTACATCAATAAGCAGAAA 328129 29 100.0 32 ............................. GCGCAGATGTAGGTTTCGTCAGCCTGGGGTTC 328190 29 100.0 32 ............................. ACACCCAACCGAAAGGACGACACTATGTCGAC 328251 29 100.0 32 ............................. CATCGTCCAGGCAATCACGCAGGCGGACGCCA 328312 29 100.0 32 ............................. GAAAAAATCGAAGAGGTGCTAACCAGCCCGGA 328373 29 100.0 32 ............................. TCCAAGGCCGCAACAACGCCACCCTGATGTAG 328434 29 96.6 32 ............................G TTGTCGAAGAACAAGAAGATGGTTCCCCCGGT 328495 29 100.0 32 ............................. CGGAGTTCCTGCGCCACAGCCTGCGCGTTGTC 328556 29 100.0 32 ............................. CTACACGGCCAGGGTTCTGTCTGCCGAGCTGG 328617 29 100.0 32 ............................. CGCGCCTTGCGGCGCAACACGGTAGCTAAAGT 328678 29 100.0 32 ............................. CACTCCACAAACACGCCGATAGCCGACTTAAT 328739 29 100.0 32 ............................. GACTGGGGCGTGTCAGCCCTGGTGTTTCAGGA 328800 29 96.6 32 ............................A GAGGCAAGCATGAGCGCCACAAAAAACCTGCC 328861 29 100.0 32 ............................. TTCTTGACCGGCCCAACATTATCAACACTCCT 328922 29 96.6 32 ............................G AAGCAGACCGTAGACGTTGCCGCACTCCGCAA 328983 29 100.0 32 ............................. TGTACTGATAGCCCGACCGCGCTTTGGGTAAG 329044 29 100.0 32 ............................. TCCTTGTGGGCCCTCGCCCAGGGGATAGCAGC 329105 29 100.0 32 ............................. GGGGTTCAATCCCGGCCCGGTGATTGTCCAGA 329166 29 100.0 32 ............................. CTCATGTCAGTGGGTCAGGGTAGCTTCCAAAG 329227 29 100.0 32 ............................. CGTACCGCTGCACTGTACGCGCACTTGGATAA 329288 29 100.0 32 ............................. TCCCACCCCTGGTCACGCTCCGTCTGCTGCTG 329349 29 100.0 32 ............................. GGCTTCACAGTCCGCTCACTCGCAGAAGCTGC 329410 29 100.0 32 ............................. GACCTTAACCGGATGATTGATGTTTTCAGCAA 329471 29 100.0 32 ............................. TGGGTCGACAACATGAGCCAGCTCGCAAACCG 329532 29 100.0 32 ............................. TGTCCGCCCGCCATAGGCAGGTAGAACTGCCA 329593 29 100.0 32 ............................. CAAGGACGCGAAAGCGGCGATGAATGGGTTCT 329654 29 100.0 32 ............................. TGCTTCTTCACCAGCGCCCACCACGGACGCCA 329715 29 96.6 32 ............................T TCGACGTGCGCACCGTATTCGGCTGTGGGTCC 329776 29 100.0 32 ............................. CAGGTGCGCCCAAGCGCTCGAAGAACTCCCAC 329837 29 96.6 32 ............................T TGTGCGACCAGTTGGGTGAACTGCTTTCGAAG 329898 29 100.0 32 ............................. TCGGTGGCACGTTCTACACCTCAACCGCCCAG 329959 29 100.0 32 ............................. GCGGGTGAGCACATCGCCGAAGCAATCGAAGC 330020 29 100.0 32 ............................. ATTCCCTTGGAATCCGGCGTTATTCCGGCTCT 330081 29 100.0 32 ............................. CACGGCAGGGCCAGTTGACTGTTAGCGGATAT 330142 29 100.0 32 ............................. TAACTGGTGTAAATCGACCCCGTACACCTCAT 330203 29 100.0 32 ............................. TAACTGGTGTAAATCGACCCCGTACACCTCAT 330264 29 96.6 32 ............................T GCTTTCTGCGGACAACCCAATCGGCGGGAAGC 330325 29 100.0 32 ............................. ACGCCCGACAGCCGCCTCATAATCTCGATGCC 330386 29 100.0 32 ............................. ACCGCCGCAACATCGCCCGAATGATCGGCTTC 330447 29 100.0 32 ............................. CATCCGGGCATCTTGCCGTCTGCGTCGAGGCT 330508 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 43 29 99.5 32 GTGTTCCCCACGCCCGTGGGGATGAGCCC # Left flank : ATCTCGATGAATTGTCAGTATGGGCTGGCCGGGGCGAACGCCGGCTTTCCAGCGGACTCAATCATGCAGATCACGGATCATGGTCATCGTAGTCTTGTCGAGCTGCCCAGCAGGCCTGCGGGGAGACGTCACCAAATGGCTCGTTGAGATTTCGGCAGGAGTGTTCGTTGGAAATATCAGCGCCCGAATCAGGGAGCTTCTTTGGGAGCGCATTGACGAATCTTCCGCTACAGGTCAAGCGCTGATGATTTGGTCCACCAACAACGAACAGGGCTTTGACTATCGAGTCAAGGACCACAAGTGGGAGCCCGTTGACCTCGACGGCGTCACCTTGATGCGCAGGCCAGCTGCACAATCTGGATACGGGAACACCACCCTTAAAGCGGGCTGGAGCAAAGCCAGAGCCATGCGGAATGCCCAAAAGTTCGGAAATAAGCGCAAAAGCACCTAAAGTGATCCCATACCAACTTGCGGGCCGGTATTCGCACTGGTCAACAAGT # Right flank : CGGAGATGCTTCGCCTGTGAAGCTGCTACAGGCTGGCCTGGCAGAGGTTAACCGTGCAGCCGATGACATCGCCCGATTCGATGAGTACGAGGAACTGTATTCTCAGGCTGGCGCGCCTGAGTGTGCTCTATAGGATGAAGCAACTACGGGAAGGTTGGATGCTATGAGTGATCATCTGGACATTGAGGAACGCTGGCCGGAGCTGTTCGCGCAGCTCGACGAGAAGCAGCGGCGTAACGTTGTCCAGTCGTTTGCGGCTGCCTGGCATGAAGGATGGGAGCCGAATCGTGAAGACGTAGAGAACTTGACTGATTACGTGCGCGGCGCCATTGATTTTGACGAGTATCTGCGTCGTTCAGACGAGGCTGCCGAGCGGCACCGGAAGACGGAGCCGCCGGTGAGCTGACGGCTGTTCGATACGTGGGCCTCATACGGCTACCGCGAAAGTGCTCCCCACGGGCGTTGGGATGAATCGTAGGTTCGTGCACGTACAACCCATC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGCCCGTGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //