Array 1 19748-20449 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNUK01000022.1 Caloramator fervidus strain DSM 5463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 19748 30 100.0 38 .............................. ACTTCAAAATTATTGCCGAACTGCCTTGAATAATACTG 19816 30 100.0 36 .............................. GTGAATAACTTGTGCCACCAACTAATGTAGCATTTA 19882 30 100.0 38 .............................. TTTTCATAGCTTGCAAGGAGTATTGTATCAGTTTCTAA 19950 30 100.0 36 .............................. AACAATTTTGCTACTTCTTTAGCTGTTTGATATCCT 20016 30 100.0 37 .............................. TTTTAATTTTACTTTTTTATTTTTTAGCCCTGCCTCA 20083 30 100.0 36 .............................. CCGCTATTTTGTTGGCAAGTTTGTATTCTTCGTATT 20149 30 100.0 39 .............................. AATTAATATTGATTTTCAAACGTAATTGATAAGTTTTTT 20218 30 100.0 38 .............................. ATGATGTCTAAATTCATGCAGCAATGTCATAACGCTAA 20286 30 100.0 37 .............................. TTTCTTTTTGAAGTTGTTGAACTCCCATAGCAATTGT 20353 30 100.0 37 .............................. CATCACGAGGTTAGCGAAGATGGAGAAATAGGTCCAG 20420 30 93.3 0 ............................GG | ========== ====== ====== ====== ============================== ======================================= ================== 11 30 99.4 37 GTTTATATCGTCCCTATGAGGGAGGGAAAC # Left flank : AGTCGTTCAGAAAGGAAGAGTAAATTTAAAGCTCTTCCTTTTAGTATAATTTTAGGAGAATAGGAGAATAGGGGGTTAGGGTATTGAGTTTTTAGGATTTAAGTGATGGAGAATTATAGTTGATAAAATTATTAGTGTGCACTTGTTGAATGCCTCCTTTCAGGTAAGATTTTGGTGGTTAATTTAATTTTACCAGGCATCTAAAACGGGTGCATATTTTTTGTAAAAAAATATGCTGGGGTTATGGCCAACGTTTATTATAGAACCTATTTAAAGAATAAATTTTTTATGTTAAAATAATATTAAAGAGTTATATTTGCAGCAAACCTAATTTTAAAATAATCCCTGATTAATCCTTGAAATAACTTACATCACAATGTGTTTGAATAATTTTCCAAATACACAACTGCAACTTCGCTGCAAAATTATTATATTTTAAAAATTCTTAAAGGGCTTAGACATAAGCAAATATCTATATTTTTAAATTTTTAAAATTTAGG # Right flank : GGTTTTTGTTAAAAGGAAGAGTTTGTTTTGTTGTTTCATTTTATTAAATTTATAACGTAATGCAGCAAACTAAAGGGGTGTAGAATGAACTACACCCCTTTAACATTTTTAAATATTAATATGTTCACCTTTGATGATTTTTAAGGGATTTTATGAGATTAAGACATGGATAATCAAGTCAATCTATAAATTTTAAGACGTTAACATATCTGTTTGAATAATAAACATTAATAATTCCTATTAGATTGGATAGAATCTATATCATAGTGTAAAGTTATATTTATTAGCATATGCCAAAATTAAAGATTAAATGAAAATAAGTGAGATAGAAAAAGAAAATTGCTAGTAACGGATTTATATACCCTATATCGGTATTTGTGTTTAGCTTTATGAATTAAATATAATGAATATGTCGAAGGGAGGGATTTGCGTGTTCAAAAAGATTTTTTATTATCCATCTAAAAATCTTGTTAAGGTTATTCCTTTAGCCTTATTGCTAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTATATCGTCCCTATGAGGGAGGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 24500-26064 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNUK01000010.1 Caloramator fervidus strain DSM 5463, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================================== ================== 24500 29 100.0 36 ............................. ACGCTCTTGTAAAGTTCGGTGAAGATATAAACGAAG 24565 29 100.0 37 ............................. TGATAAAACTAACTTGAAGGCGTTTTTATTTATTCAA 24631 29 100.0 37 ............................. ATATAAAAGACGCAAGTATCACAAACGCAAAAATAGC 24697 29 100.0 37 ............................. CGTCTATACGTTCTTGAAGTATATCGTCCCAAAATTT 24763 29 100.0 36 ............................. GCGTGGGAAGAGCATATAAAAACTTTTAAAGTATTT 24828 29 100.0 38 ............................. ATTGAACTTCTTGGCACTATAAATAAAAATTCATCATC 24895 29 100.0 38 ............................. TCTTTGGCGGAGAGGTGGTGAAGACGAGTGGCAACTAA 24962 29 100.0 39 ............................. TTCTTTATAATACACTAATTCATTTGTTAATCCCTGTTG 25030 29 100.0 39 ............................. AGAAACAAGAATTAAAAAGGCTTGAAGAAAAAATAGATA 25098 29 100.0 38 ............................. TAATGCCTCTTCTGCTTCTGCAACTTCTGTCACTATTA 25165 29 100.0 36 ............................. AACGAAGCGAGAGCAATGGAGGAAAAAGAGCCACTT 25230 29 100.0 38 ............................. GCATATTGCTGCAAAAACATGCTATCAAAATTCACAAA 25297 29 100.0 38 ............................. CGTTTAGTTCGGTAAAACATCTTCTAAAAGCATTTAAT 25364 29 100.0 37 ............................. CGATATGTTCAGCCATAACCGAATTAGCAGCAATTAC 25430 29 100.0 36 ............................. AATTATACCCTTGATGCTCCGATAGAAGGTAAAACT 25495 29 100.0 39 ............................. TGTCATATGTTGCTCTATGTGGCATAGGCTGGGTGGAAA 25563 29 100.0 37 ............................. CAGTTTTGACATATTGAACACCCATTTGTAATTATTT 25629 29 100.0 38 ............................. CACCCTCGCAATCGATTAAATCGTTTGGTGTGCATCGT 25696 29 100.0 38 ............................. TTATGTGATTGTAGCAACGGTAACTATGAACCATATAA 25763 29 100.0 35 ............................. GCTGAAACATTCTATATCGAAGGTTGGAGTTGTGA 25827 29 100.0 36 ............................. CTATTATCTTATTTTTAATTTTTCTTATATCTCTTG 25892 29 100.0 114 ............................. TTAATTAATAAAAAGGAGGAGATGTGTATGTTATTTAGTTTAATTTGTTATATAAAAAAAGTTATTTCACAAAGTTAAATAAAATAAAATAAAAACCTCCTAAAAAGGGTATAA 26035 29 100.0 0 ............................. | T [26061] ========== ====== ====== ====== ============================= ================================================================================================================== ================== 23 29 100.0 41 GTTTTATATGGACTATGTGGGATGTAAAT # Left flank : AAACATCTTTTAGGGGATGAAATATATAAACCATTAAAGGCATGGTGGTAATATGTTTGTAATTATTACCTATGACGTAGGAGAAAAAAGAGTAAATAAAGTTAGGAAAAAATTAAAACAATATCTTATGTGGACTCAAAATTCAGTTTTTGAGGGAGAAATAAGCGAAGGGAAGTTGCAAAAGTGTTTGTTTGAAGTAAGCAAAATTATAAAAAAAGAAGAGGATTCTATTTATGTATATAGAATTAACTTTCCAGCACAGGTTAAAAAGGATATAATGGGGATTGTAAAAAGCTATGAGGATATATTTATATAACTGCAGCGAACCTAATTTTGAAAGAAAGTCATTTTAAGCCTTGAATAAACTAATTTAAAGACTATTCGTTTTTAAATTCTATTTTCACAATCCCCCCTTTGCTGCAAAAAATAACAATCATAAATTTGAATAGTATTAATTTAAGCTAGAATAATTAAAGATTGATTTAATATGCTTAAATAGG # Right flank : TAAAAATGACGATGTATTATAAATGATAGGTATGGGGTTATCTATAAAAGAGAAATTATAATAGAGAAAGTTTAATTTAATAATAAGATGTTTAGCTTATTTTATATTCAAACTTTAAGAAATAGTTGGTCATTCTAAGATTTATATAATTTGAGGATATTTTAAGTTTATTTTTGTGTATTTAAAATTTAATAAATTTGTGTTATACTAATTAATGATAGTTTTTTAGCTTAATTGTAGGAACTGTTATATAAAACAAGTAAAGACTGTTTTACACAGGTGATAATCATATGCAAAGAGCATTTATTAAAGTAAATGGTATTGTTCAAGGGGTAGGATTTAGACCATTTGTAAATAAGTTGGTTGAAAAATATTGTTTAAATGGATGGATTAAAAATACTTCTTTTGGTGTAGAAATGGAAGTTGAAGGTGATGAAGAAAATTTAAAGGCTTTTGTACACGATATTAAAAATAATCCGCCAAAACTTGCATATATAGAA # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATGGACTATGTGGGATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //