Array 1 6036-5008 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHHP01000008.1 Mycoplasma neophronis strain DSM 24097 8_Mycoplasma_neophronis_strain_DSM_24097, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6035 36 100.0 30 .................................... TTTTTAATTTATTTAAAGACGCGTTAAATA 5969 36 100.0 31 .................................... GCAGAACCATAAAGTCCTTGTGCAGTGCGCA 5902 36 100.0 30 .................................... ATTAGATACGACATACATAAAAGGAGCTGA 5836 36 100.0 30 .................................... ATCGATTTAATTGTTAGAAACGAATGTGTT 5770 36 100.0 30 .................................... AGCTCGAACTATTTTTGAGTGCTGATTCTG 5704 36 100.0 30 .................................... TAAAAATTCGAATTATTATTATGATAAGTT 5638 36 100.0 30 .................................... ATTATCTTATGTTTTGCTAAAATGTCGTGG 5572 36 100.0 30 .................................... GAGCAAAAAGAAAGTTTTTGGGAGTATATG 5506 36 100.0 30 .................................... TTGTAAAACCGATTAAATTAGCCTTGTAAC 5440 36 100.0 30 .................................... ACTTTAAATTTAATTTAAAGAAAAATGGTA 5374 36 100.0 30 .................................... AAATAACAAGCGATCAATTAGGAGAACTTG 5308 36 94.4 30 .........A.........G................ TGTGAGAAGATTTAATGATTTATTCAAAAT 5242 36 100.0 31 .................................... AATAATTGAACTAATCGTTCAGAATTTTTAA 5175 36 100.0 30 .................................... CTTTTCCAAATTCAACACACTGTCTCATTA 5109 36 100.0 30 .................................... CTCCTGACGAGGTAGAAAGAGTAATGCGTA 5043 36 97.2 0 ......T............................. | ========== ====== ====== ====== ==================================== =============================== ================== 16 36 99.5 30 ATTTTAGTACTATACTATTCTTAAGCAAGATAAAAC # Left flank : CCAATCTCATAAATGAATATTGCGAACAATATAATTTAAAATTCGCAAATAATTTACTTGATTTTAACTTAGATAAAATTAAGTTACTTAAAGCCATAATTAATATTAATGATAACTTACTAATCAATAAAAATATTTTATTTAAATGATTAGAATCATCAAAAAACTCAACAAAACAAACAATCATACTCAATAACTTCGATAATATTAAATTAAAAGAATTGCTAAAACATACTAATTCTTTTAATTTCATTTTATTCACAAACAATATGTGAAAATATTGCTCAGATTGAGATGATTTAGAAGCATGCAGCTTTTATTATAAAAATGAATTTATTTCTTTCCAAGATATCAATTTACTAAAAACTTTTATATTTCAACAGTTCCCCGGAATTAGTTTTGAAACCTTAGCTTCTGACTTCGACATTCAAAATCGAATCAAAAAGTTATTAATTCAATAATTTTTCGCCAAAAAACATTGAGTTTTTCAACAAAATGAC # Right flank : ATACGGAAAATATTTATATCTTTTTGAATTTTTAATTAGAAAATAAGGAACTATTTTGTTTTAATTCTATTTTCTATAAAACTACCTGCCCGGATCTGCGGGCAGGTAGTTTTTTTAAATTATAGGGTTATTACATTTTTTATATTTTTTAAAAATAATGTTTATTTTTGTTCTTGTTCTTTTTTCTTCATTAGAATTTTTATTTGTAAAAACTTTTTTGCTTAAATTTTTAAACTCTATAGTTTGATTTTCAAACGCTGCTCCAACTAAATAGTAATCTTGATTTTCTTCCGTATTGTTAAATATATTACCCTTAAATCAAACATCAATCGGCTTATTCTCTAATGGGATATCTTTAGAAAGTTTAGCCTCATTTAGTTTATTAGTTATATAAATTGACTCATCTTTAAAATCAACTTTTTTGCTTGTAAAACGATAAATTTTTGCGTTCACAGGAATGTATGCATATTTATCTTCGTTTGTTTTGTATATTAATAGCG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTAGTACTATACTATTCTTAAGCAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //