Array 1 43918-45212 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NVJY01000011.1 Bacillus pseudomycoides strain AFS060037 AFS060037_104_F10_Contig11_140523, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     43918	    32	 100.0	    34	................................	AATACTTTAGTTCAAATGGGATACTATCCACTTT  	
     43984	    32	 100.0	    35	................................	TGAATAAGGGAACGATGACTACAATACAGCCCCCA 	
     44051	    32	 100.0	    35	................................	ATGATTGCCCCGTGGACGTTGCCGAAAGTGCTATT 	
     44118	    32	 100.0	    34	................................	TCTTTGTTTTTGTCTGAGATGCGACCATTTCTTG  	
     44184	    32	 100.0	    35	................................	CATAAGCGACGAGTATTATTGGAGACATTACTATG 	
     44251	    32	 100.0	    34	................................	AAAACGGTACATTCTGGATGGCGCATCCAATGTT  	
     44317	    32	 100.0	    34	................................	AAGAGTAATCCAATAAGTGCTGTTACAATCGCAC  	
     44383	    32	 100.0	    35	................................	TTCAACTGAATGATGAATATCACGTAAAAAGTTAT 	
     44450	    32	 100.0	    36	................................	TGGCCATCTACTTGCTTAAATATCACATCGAACCAA	
     44518	    32	 100.0	    33	................................	TCAAAATTCACGTTTTCTTTAGGTTGTTGAGCA   	
     44583	    32	 100.0	    36	................................	AGGGATAATACCTACTTAACACCCAGAATGAATACT	
     44651	    32	 100.0	    33	................................	ATTAGACTCCCTTTCCCTAGCATGGAAGAAATG   	
     44716	    32	 100.0	    35	................................	CACTGAGGGATTTGCAGCGACTAAAGCGGTTCATA 	
     44783	    32	 100.0	    35	................................	ATCAACACTATTTGCATTAAACTTGAAAGTACCAA 	
     44850	    32	 100.0	    35	................................	AAAAATTATTCATGTTCCATATTTCATAGAGGTTG 	
     44917	    32	 100.0	    34	................................	TATCCATTGGTGCAGTCGCTCTTATGAGTGGTTG  	
     44983	    32	 100.0	    34	................................	ATTGATATTTATATGAATGTGCCAAAGGAAAAGA  	
     45049	    32	 100.0	    35	................................	ATAATTGCTCCATGAACATTCCCGAAAGTACTATT 	
     45116	    32	 100.0	    33	................................	TCAAAAAACTAAGAAAGTCACGCGGCTTAACTC   	
     45181	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
        20	    32	 100.0	    35	GTCGCACCTCTTATAGGTGCGTGGATTGAAAT	                                    	       

# Left flank :   AGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACAGTTGCTAGTATTAATTACATATGATGTAAGCACTGTTAGTGGTGCGGGACGAAAAAGACTGCGGAAAGTTTCAAAAGTATGTCAAAATTATGGTCAACGAGTCCAAAATTCAGTGTTTGAATGTGTTGTAGATGCAACTCAATTTGCTACTTTAAAAATGGAATTAATTAAAACTATTGATGAAAGTAAGGATAGTCTCAGGTTTTATCAGTTAGGTAATAACTATAAAAGTAAAGTCGAGCATATTGGTGTAAAAGAATCAATTGATTTAGAAAGTCCCTTAATTTTTTAGGTGCGAATGTATAGCATACATGAAATCCCTAGTACATTCGCACCTGAATTTTCATAATTTGTGATTAAAACTTATGATTTTCTATATAAATTTCTTTATCAAATAAAAAAACTTGCATATTTTTGAACAGAATTAACGTATTTGTGTATTGTTTTGAACACAAATCGCT
# Right flank :  TTTCCCCTCAACAATTGCTATAAGATAAAATGAATCATATTTCGACTTTCACTTTCCTCTTTTTATCCTTTACTTTTATGCAAAAGAGATATAAAAAGAAGCTTAAACCCTTATGTATCAATGGATAGAAGCTTCTTTTTTTTGCAAGAATATCCTTTGCAACAAGATGCAATTATATTTCAGCGTATTCGCATCTTGTAGCTATTAGTATGTATGCTATATTCCACAAAATAATTACAAAAAATCTCTTATTCTCCTTATCTATTTTTATTCTATGCACCATAGGGAAGACGTATGCACCATTCAAGGTGAATGTGTATAAATTTAATTGAAAGTGCCCAAAATAAAAGTTAAATAGGGTATGAGAAAGGAAGGCACTTTCATGAAAGGAAATAAAAAAAATCGTACAAAACTAGGAAAATGGTTAGATCGTAACGGCATAGAGCAACAGGAATTAGAACAGGAAACTGGTGTTAGTCGTAATACAATATCAAGATTAT

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCTCTTATAGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         F [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.20,-2.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
//