Array 1 685-2634 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAHN01000038.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22703, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 685 36 94.4 30 ........G...A....................... TTCTATTATAAAAGCTGCCTGACTTACTCG 751 36 100.0 30 .................................... TCAGGGCTATCGGGGCTGACCGGTTTATTG 817 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 883 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 949 36 100.0 30 .................................... TCCATGTGAACTCGTTGGCGCGTTCGATGA 1015 36 100.0 30 .................................... TAAACCTCTGTCGGTTGGTTTGCTTAGATT 1081 36 100.0 30 .................................... CGAATTGGAAAAGTTGCCCTACCGGTGGGG 1147 36 100.0 30 .................................... GTCGCATGGTAAAATAACCACCGCTTTACA 1213 36 100.0 30 .................................... AAACTAAAACTTTGGAAAGTTGGAAAGTTG 1279 36 100.0 30 .................................... CGGCGCATCCCCTTTAATTTAATATCACTT 1345 36 97.2 30 ............A....................... ATAGAACCTATGGCTGCTACGGCGTTGACA 1411 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 1477 36 100.0 30 .................................... AAGCATTGACGATATTTGTGTGGCGTTGCA 1543 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 1609 36 100.0 30 .................................... CATCAAATCATCCGCCGCGATTCGATCGCA 1675 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1741 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1807 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 1873 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 1939 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 2005 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 2071 36 100.0 30 .................................... ACCAAGATATATCAAAATTGTAGATGAAAA 2137 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 2203 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 2269 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 2335 36 100.0 30 .................................... AGTCAATGAATCACTAAAAGCCAAGTCAGA 2401 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTCCTTTACA 2467 36 100.0 30 .................................... TTTTTCGATTTTTTATATTGAGCGTTTTTG 2533 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 2599 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 99.6 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : TACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : NA //