Array 1 132710-131881 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNP010000020.1 Paenibacillus sp. EKM207P 101218_scaffold20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 132709 32 100.0 35 ................................ ATTAGATAAATAAAAGAGCCACGTTTCACGGCGGC 132642 32 100.0 34 ................................ TGAAATCAATTGATCGTAAATAGCCGAATTTGAC 132576 32 100.0 33 ................................ CTCAATGTAAAATACAGGATCGTCCCACCCCAT 132511 32 96.9 34 .....G.......................... AGGACCAAGTACGCCAGCTTGAAGCGGGTATTTC 132445 32 100.0 34 ................................ CTGCCTTTCACGGCGTTAACAATAGCCGCCATAA 132379 32 100.0 33 ................................ GCCTACATATCCGCGCCATTAATCATATTTACG 132314 32 100.0 37 ................................ TTTGGATACCTTCCGGCGTCGATGCAGGCCGTTGTAA 132245 32 100.0 34 ................................ CGGCGTGAGGGATTTGTTTCACCGGAGGTGAACA 132179 32 100.0 36 ................................ ATCATAGTTCCAGGCATCGTATGTATACCAAAGGGT 132111 32 100.0 34 ................................ ATACAGGTTCTGTTGTTCACTCACCTTTACCGCC 132045 32 100.0 35 ................................ ATCGTCCTCCTTAGTCTCTGCGACAGGCTTGTTGA 131978 32 93.8 35 .......................A...A.... ATCTTCCATTGTTGGTGCTCCTATCGGATAAGCTG 131911 31 75.0 0 ..TA.G...C..G.......A.....-..T.. | ========== ====== ====== ====== ================================ ===================================== ================== 13 32 97.4 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CCAGCCAGCTTTCCAGCTTTGAATAAGGTAGTCGCACTCTGTATGGAGTGCGTGGATTGAAATCAGTTCTCGAATTCTTGCAAGCTGTTCTGAAACATCGTCGCACTCCATGTGAGTGCATGGATCATGACGGAGCAGCTGCCACTTGGTTGTACGAGTGGAGAGTCCTTCTTTATTCGAAATTATGATGCAAGTCCGAGAAGTAGGGGCTGGACATTTTGCGCGGTTTGGAGGGGATGGCGGCGGTACATTACAAAAAGAAAGTAGAGCATATAGGTCTAAGGAAGCTTACGATATGGAAAGCCCATTGATTTTGAAAGGTGCGAATGTGAAGCTCACATAAAAACCCCAGGGCCTTCGCACCTCGGAATTTGTCGAAAAGCATTAAGAAAGCTGTCTATGAGAAAAAGACAATAGTTGATATAAGTCTTTTTGGCATCAGTTTTTGCAATAATGTGTGGAATTTATATCATTAGAGCATCAATTACTGCATTTTCGCT # Right flank : GAAAAAGAAGTCTCGTTTCGTGCCCCGCCCAGCAGTAAATAGTGCAAATTTCTTTTTAACGGATTCCTTATTCGACAATTTCCCCCTTACTTTTATGCAATAATTAACTAACATTACTATGTTGAAGCATAAAATTAACTGGGGAGTTGCTTATGAGAATTTTCATGAGTAAGTTTCTAGAACGCTATGTAACGATTTTATTGAGCTACGCAATAGGTATAGGGTTATTTTACGCCGTCCAATATGTCTCAATATGTGTAAGTTATGCTGAATTTTCGTTATAAATATTAGTTGCATAATATATTGACAGATGGTTAATTTTGGAGAAGAATAGAGGGTGATTTTTTAAAAAATGGAATTTTAATGTGAAGGGTGGTTATGATTTGAAGCATACACCTACGATTTCAGCGGAGTTTGAGGATTATCTAAAACAAAATGATATGACGTTGAGTCAATTTGCCGAATATTCAGGGGTTCATCAAAGAACGCTTAGTAATTGG # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 133588-133147 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNP010000020.1 Paenibacillus sp. EKM207P 101218_scaffold20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 133587 33 100.0 36 ................................. CATAGCCTCTCGAACTACAGGCATATAGACCTGAAC 133518 33 100.0 33 ................................. CGTAACGAGTTTACTTTGGGTGGAGATGGTGGA 133452 33 100.0 35 ................................. AGATCGAAAAAGTCTCCGTTATACAGATGGGAAAC 133384 33 100.0 35 ................................. ATACCCTACCAATACGGCTGAAATCGAAGAGGCTA 133316 33 100.0 36 ................................. CGGTCTGCGCCACCAACCAAGGAACATTCTCCCGGT 133247 33 100.0 35 ................................. ATCATCCAGCCAGCTTTCCAGCTTTGAATAAGGTA 133179 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 7 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CGTGGATTGAAATCATTGAATATCGCGTCCGTATCAAGCCGGATTCCA # Right flank : CAGTTCTCGAATTCTTGCAAGCTGTTCTGAAACATCGTCGCACTCCATGTGAGTGCATGGATCATGACGGAGCAGCTGCCACTTGGTTGTACGAGTGGAGAGTCCTTCTTTATTCGAAATTATGATGCAAGTCCGAGAAGTAGGGGCTGGACATTTTGCGCGGTTTGGAGGGGATGGCGGCGGTACATTACAAAAAGAAAGTAGAGCATATAGGTCTAAGGAAGCTTACGATATGGAAAGCCCATTGATTTTGAAAGGTGCGAATGTGAAGCTCACATAAAAACCCCAGGGCCTTCGCACCTCGGAATTTGTCGAAAAGCATTAAGAAAGCTGTCTATGAGAAAAAGACAATAGTTGATATAAGTCTTTTTGGCATCAGTTTTTGCAATAATGTGTGGAATTTATATCATTAGAGCATCAATTACTGCATTTTCGCTGTCGCACTCTATATGAGTGCGTGGATTGAAATATTAGATAAATAAAAGAGCCACGTTTCACGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 417-44 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNP010000003.1 Paenibacillus sp. EKM207P 101218_scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 416 33 100.0 33 ................................. ATCTACTATATCTTGAAGAGTTTTTACGATATC 350 33 100.0 35 ................................. ATGACTACATCCATTACTACATATGAGAGATTTAC 282 33 100.0 36 ................................. TTTTAATAGCAAGTACGTTCCGTTGGAGGGTGTAGT 213 33 100.0 36 ................................. TCATTAATCGTCTGTCTCCGAATAGCCTGTGCCAAG 144 33 100.0 35 ................................. TGTTTTGGCTCCTGGATCATTCGCTAATATTTTGC 76 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ==================================== ================== 6 33 100.0 35 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : CCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATTACGTATGATGTAAGCACGGTAGATAGAGAAGGCAGAAAAAGACTGGCAAAAGTTGCGAAAAAGTGTGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATCTTAGACTCAACCCAGTTCCGCCGCTTAAAATATGAACTCGAAGAATTGATAGACAAAACGGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTATAAAAAGAAAGTAGAACATATAGGGGCTAAGGAAGCTTACGATATGGAAAGTCCTTTGATTTTATAAGGTGCGAATGTGAAGCTCACATAAAACCCCCGGGTCCTTCGCACCTCGGAATTTGTCGAAAAGCATTGAAAATGCTGTCTATGAGAAAAAGTCAATGGTTGATACAAGCCTTTTTGGCATCAGTTTTTGCGATAATGTGTGGGATTGATATCATTAGGGTATCAATTACTGCATTTTCGCT # Right flank : TGTTCCCCGATACAGCGGAACCGGTGCATCGTTCTTGTCGCACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [30.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : NA // Array 2 9725-9426 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNP010000003.1 Paenibacillus sp. EKM207P 101218_scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 9724 32 100.0 35 ................................ TCGTGCATCCGCTCCGAGCGATACAATCAGCCGAC 9657 32 100.0 34 ................................ GCACCTAGAATAGCTGGCATTGCAGCCGCGTTAG 9591 32 100.0 36 ................................ TATAAGGGCAACAAGCCAGCCAAGCGGATAAGACAA 9523 32 100.0 36 ................................ TCAAGGGCCATCAGTCCGGCTCGTATGTCCTCTGTT 9455 30 90.6 0 .......................-.G.-.... | ========== ====== ====== ====== ================================ ==================================== ================== 5 32 98.1 36 GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Left flank : TCTATGGACGTCATTAGCGCCCGCGTTAGACAATGTAAATGCCCTATATCTTTTGCCTGTCCAATAAGATGAAATTGGCTGTCGAACTGGATGCTTGCATAGGTTTTCTACATAGACAATGTCCTGGACGAGCCTCATGGGCACTAGATATGATGGAAGAACTTCTAGGGGGATATGACGACCATTTTCTCCTTACTTTGATTAACAAGAAAGAAAACGGACTTTTGCTTCTACAACTTAGAAGATGACTTCAAAAAAGAAAGCAGAGCATTTAGGAACTAAAGAAGCCGATGATATGACAAGCCCACTGATTTTGTAAGGTGCGAATGTGAAGTTCACATAAAAATCCCGGGTCCTTCGCACCTCGGAATTTGTCGAAAAGCAATTGGATCAGTGATCGTCAGTAAAAGTCAATGGTTAATACAAGCCTTTTAAGCATCGATTTTATGCGAAAAGTATAGAATTGATAACATTAGAGTATGAATTCCTGCATTTTCGTT # Right flank : CATCTATAGTACCTAACTTACATAACAACTCCCAGCAGATTCTTCATGATTGTACCCAAGATATAATTGATAACTTCAGTAATATCGGTATCTTTTTCTTTAAAAATATTATTATTTCCATATGACTATAAAAATATTTGTTTACATAACGAGAATAAATCTAATATGATTAAGAAGTCGCAGAGAAGCTAGTATTTTGGAGGAGTGTGGAGCATATAACGCTACGATAATATATGAGGAATTGCCTATAAATTCACTTAACAACGTAAATTTGGATTATGGTTTTCTGGATATTGTCGATATTGTACCTTATGACACGATTACACAATTTTAAGTATTTGCTTAAAGGAGGTAAATAGATGAATATATTAGCTATTCCTGGTTTATATTTTTATATCTATCTAGGCATAGGTCTTATCGTGGGATATCGGTTTGTGTCTCAAGAATTAACCGAACGTGCACAGGAAATGCGGCAAGACAACGAAGAGGAAAACGATGAG # Questionable array : NO Score: 8.96 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 11096-10399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNP010000003.1 Paenibacillus sp. EKM207P 101218_scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 11095 32 100.0 35 ................................ GCTTTCTTCCTGTACGCATTTACAAGCCCGATTAA 11028 32 100.0 34 ................................ CCTTAAAACATAGCTTTGGGCGCTCATTATTAAC 10962 32 100.0 34 ................................ GCTACTGTAGCGGAATTAGACGGTTGTCAAAGTG 10896 32 100.0 35 ................................ ATGACTGCATGGGGTGTAATCAGGATCATTGGCAG 10829 32 100.0 34 ................................ GCTTCACACCGTCCCATTTAACAGACTGAATAAA 10763 32 96.9 34 .........T...................... TGCGTGGAAGACGTCGTCAGGCGCAGCTTTTGCG 10697 32 100.0 35 ................................ ACCAACCCTCAGGAGAAAGCCGCTTGCGCGGCTCC 10630 32 96.9 34 .........T...................... TGTGCTGTATTTTCAGCGGCTCTTTTCGCCTGTA 10564 32 96.9 37 .........T...................... GAGTATTTACCCATCCGATATAGTCGCCAGATTTAGG 10495 32 93.8 34 .........T....A................. TTCTCGGTTTCTTTTGAGATTTGGGTATTTTTCA 10429 31 75.0 0 .........T..........C.AA..C-..GA | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 96.3 35 GTCGCACTCAATATGAGTGCGTGGATTGAAAT # Left flank : CCAAGTTCCGTATTCGTGTCAATGTCATCTATCCAGGGGCTATTTCGACGAATATTGATGAAACCACGGAGAAATCAGAAGGGTTAAAGCAGATCACCATCCCTGTGCAATTTCCTGAAGGAGATCAGCCGTTGGCAGATGGACCGGGGCAACCCGAGCAGGTTGCTGATTTGGTGACATTCTTGGCATCTGATCATTCGCGTCACATCACTGGCGCACAAATTGTGATTGACGGGGCAGAGTCGTTATTGTTTTAGAAAATGGAGCAATATCTGGGATAGAGAGAGGTTTTGTGGTATCTTAAGTGTATTCTTACTTACGGTGCGAATGTGAAGCTCACATAAAAACCCCAGACCCTTCGCACCTCGAAATTTGTCGAAATGGATTTATATTCATTTTATCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTAAGCATCGTTTTTTTCGAAAATATATGGAATTGATACCGTTAGGGTATTAATTCCTACATTTTCGCT # Right flank : CGGAGTAGCTGCACTTGTTCGCACAAGTGGAAAGTGCTTCTTGTTATCTGTACCATTAAGCAAATTGGTGAATTTGATGAAATCGGGCATTTTACCCGGTTTGGAGGGACGTGGCGACTCAGTATAAATCTGTGTGGGATGATCTGATCTTACAGCAAAAAGATGATTTATCCTTCTATGGACGTCATTAGCGCCCGCGTTAGACAATGTAAATGCCCTATATCTTTTGCCTGTCCAATAAGATGAAATTGGCTGTCGAACTGGATGCTTGCATAGGTTTTCTACATAGACAATGTCCTGGACGAGCCTCATGGGCACTAGATATGATGGAAGAACTTCTAGGGGGATATGACGACCATTTTCTCCTTACTTTGATTAACAAGAAAGAAAACGGACTTTTGCTTCTACAACTTAGAAGATGACTTCAAAAAAGAAAGCAGAGCATTTAGGAACTAAAGAAGCCGATGATATGACAAGCCCACTGATTTTGTAAGGTGCGA # Questionable array : NO Score: 9.07 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCAATATGAGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-3.00,-3.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //