Array 1 578826-581519 **** Predicted by CRISPRDetect 2.4 *** >NC_017467.1 Lactobacillus helveticus H10, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 578826 32 100.0 34 ................................ GGTCAACGATGTTAAAGCAGCCAATCCTTATGAT 578892 32 100.0 36 ................................ TTTAGTATCCATAGCCTGTAAGTCCTCCATCCACAA 578960 32 100.0 34 ................................ TTCTAAGCAAAATAAAAGCCACCCGAAGGTGGCA 579026 32 100.0 35 ................................ TTTGAAGTCCTGTGCCTGCGAACTGGTCAGTATAC 579093 32 100.0 34 ................................ GTATGGGAACTTTTATCATAATCACTCTTGTTAA 579159 32 100.0 34 ................................ AAGAAGATACTGCCTGACCGGTTCCACATTAGCA 579225 32 100.0 35 ................................ ATGTAGTGAGTGGCTTTACCATCAGCTCTCATAAC 579292 32 100.0 34 ................................ AAAACGAGCTTAAAGCGCCAAAAAACCAATGGAA 579358 32 100.0 35 ................................ ATCAAGATTGTAGTTGCGCATTAGGAATTGTTTTT 579425 32 100.0 34 ................................ ATTTGAATATGCACGCAGATGATGATGGCTTTTT 579491 32 100.0 35 ................................ ATATCTCAATATCAGCTCCCTCCAAATATATTAAG 579558 32 100.0 34 ................................ ACTTCGCCAACAGCCTTTTCAACCGCGCTATTAA 579624 32 100.0 35 ................................ AAATATGATGATCCAAACGGTGGCGACAACGGACA 579691 32 100.0 34 ................................ TTTAAAGACATCGTAGCACCGGCTGAAACTGATC 579757 32 100.0 34 ................................ ATGATGGGCTACCAGTATCCAACACATTGTCTAA 579823 32 100.0 33 ................................ AATCGAAAGCTCAATATATCCCTGTGAAATAAC 579888 32 100.0 34 ................................ CGTTCTGCTGAAGAAATTGCTTTACTAATTCTCT 579954 32 100.0 35 ................................ TCCGTATGGAATATCGGATAGCGCTTGAACACCAG 580021 32 100.0 34 ................................ CGCTCTTGCCATATTTCGTAATTGCATATCGAGA 580087 32 100.0 34 ................................ CTATTGCGTTGTTCATCGCAATAAGATGTAGGGT 580153 32 100.0 35 ................................ TATCACAGAAAGCAACACTGCTACTTGGCATTCAA 580220 32 100.0 34 ................................ AAAAGGTGAACCACATCAAGAATCCAAACAAGAT 580286 32 100.0 34 ................................ AAACCAAGCCATGCCTGATGCTGTATAAGCATCC 580352 32 100.0 34 ................................ ATAAAGGTCTTTAAGACCAGTACCATTAGCAAAG 580418 32 100.0 34 ................................ TTGGTTACGACTCTGACAAAAGCAAGAAATCAGA 580484 32 100.0 34 ................................ GTTTGTATTGCTTAACAATATGACCAAAAATTTT 580550 32 100.0 34 ................................ AGTTGTTTGTTGATTAGTTACAGTTTTAGTAGTT 580616 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 580683 32 100.0 36 ................................ TCTAAGAACTCTGAAACAGTGTGCTTGATCCAGTGC 580751 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 580819 32 100.0 35 ................................ ATATACTTGAGAGCCCCACCTTGAGTTTTGCCAAA 580886 32 100.0 35 ................................ AAAAATTGTTAAATGCAGGATGGAGCTAGACTATG 580953 32 100.0 34 ................................ ATTGATGGAAAATAGCCAAAGTCAGGGCTATCAA 581019 32 100.0 36 ................................ CCTCCTAGATTTCTGCCAGTGAGCATTGTGTCTGTG 581087 32 100.0 34 ................................ ATATAGCACATTAAGGCATGACCGAGTTAATATC 581153 32 100.0 36 ................................ GCCTTCCTTGACCACATGTGCTTGACAGCCGGTATA 581221 32 100.0 35 ................................ CAAAAGAACCAGTTCACGTGCCAACAGGTAAGTAA 581288 32 100.0 35 ................................ ACTGCTAAGGGCAAACCATTGGACTTGCTTAAACA 581355 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 581422 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 581488 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 41 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //