Array 1 1-432 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPHR01000062.1 Leuconostoc pseudomesenteroides strain LMGH100 H100_contig000063, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1 36 100.0 30 .................................... TCTTTGTATCGCCGGTTGAATACCCCTTTG 67 36 100.0 30 .................................... CAAACACAATTGTTATTGAAGTGAACTTAT 133 36 100.0 30 .................................... TCTTTGTATCGCCGGTTGAATACCCCTTTG 199 36 100.0 30 .................................... TCTTTGTATCGCCGGTTGAATACCCCTTTG 265 36 97.2 30 ...................................T ATTATGGTAATAAAGACGCAGCAAGCCTAC 331 36 100.0 30 .................................... AAAACCATAGTTCCCCAAAACAATGCTTCA 397 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 99.6 30 GCTTCAGATGTATGTCAGATCAATGGGGCTTTATAC # Left flank : | # Right flank : CTCAAACTTTATATAACCGTTTTAAAAAGAGCTTCAGTGGGGCAGGCCAATAATATATTATCCGAATACTTAAAAACCCGCAATTATTTCAAATCGCAATCAAGTTTCAGTGGGAAGCATCACCCAAAATAATTTTTATTTTAATCCTAAAAAAGATTTAAATGAGATATCTATTACAAAAATTTAATGATATTATAAATGGTAACTAAACAGCAGTTTAGCAATTAATATTATCGCAGAATGGAGAAATATTATACCTGCATTTATATTTGCTATATTTTTAACAACTGTTATTGTCATTTTAATTCCCGATATACTTATTATTGAAGTTTTTGGCGGTTTTTTGTTGGTCTTGGGTATTGCTTATCTGCTATGGAAAGTCTTCGGTACTGATTTTAATGAAACAGAATCTGATACATGCAATTCACGAATACGTAAATTATTAAGCCAACTCACATCGCTTAAAGTTGAAAAAAATAAGTAAAACTATTTTGGCAAAT # Questionable array : NO Score: 3.04 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTATGTCAGATCAATGGGGCTTTATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 24114-23935 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPHR01000024.1 Leuconostoc pseudomesenteroides strain LMGH100 H100_contig000024, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================================== ================== 24113 30 100.0 53 .............................. TGAAGCATTGTTTTGGGGAACTATGGTTTTGTATAAAGCCCCATTGATCTGAC 24030 30 100.0 36 .............................. CAAAGGGGTATTCAACCGGCGATACAAAGAGTATAA 23964 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================================== ================== 3 30 100.0 45 AGCCCCATTGATCTGACATACATCTGAAGC # Left flank : ACAATTTTGTTGCATTAAAAGTTAACCCTATTTGCCAAAATAGTTTTACTTATTTTTTTCAACTTTAAGCGATGTGAGTTGGCTTAATAATTTACGTATTCGTGAATTGCATGTATCAGATTCTGTTTCATTAAAATCAGTACCGAAGACTTTCCATAGCAGATAAGCAATACCCAAGACCAACAAAAAACCGCCAAAAACTTCAATAATAAGTATATCGGGAATTAAAATGACAATAACAGTTGTTAAAAATATAGCAAATATAAATGCAGGTATAATATTTCTCCATTCTGCGATAATATTAATTGCTAAACTGCTGTTTAGTTACCATTTATAATATCATTAAATTTAGATATCTCATTTAAATCTTTTTTAGGATTAAAATAAAAATTATTTTGGGTGATGCTTCCCACTGAAACTTGATTGCGATTTGAAATAATTGCGGGTTTTTAAGTATTCGGATAATATATTATTGGCCGTTATATAAAGTTTGAGTATAA # Right flank : AGACCACCTGTTCGCATTGGCTAGTCACTTCCAAATTGAACAAAATCTTCATCAAAGAAGACTTCGTGGTATGCCTCGCCATTTTTTTTGATGGGTGACGCAGCCATTCCAAGGGATAATACTTTCATGCCGTGAGTCATGCTAAAATCATGTAAACTCAAAATTTCCAGTGGCTTTAAATAGAGATGTATATTATTAAAGACTAAAATGCGCTGCTCTGAAAAGTCAGACATAATACGTACCACGTCTACTATTTTATCATATGCCGACCCACTATTGATAGTATCAATTAGCACCTTTTGTGATTTGATCAACTCATTAAAATCCCATTCTCGTTCAATACGTAAAGGTAAATCATTATCAAAAAGTATTTGTTGGAAAATCGTTTTAATCGCCATATCATATCGTGCTAGCTGCATTAAATTATCTTCATCAGCATGACATGCAATAAGACTCAAAATAGATTTAGCATAAATTTTACTCAAATCAATTTTATTTTC # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.49, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCCCCATTGATCTGACATACATCTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //