Array 1 6357-5047 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIQYA010000008.1 Escherichia coli strain C2033 NODE_38_length_42644_cov_21.111644, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6356 29 100.0 32 ............................. GTGACCATAAGGGCATTTCATACTGCCTTGCT 6295 29 100.0 32 ............................. GTGAACGTGACAACGCCCGCGACAGAAACGTC 6234 29 100.0 32 ............................. GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC 6173 29 100.0 32 ............................. AAATTAATTTCGAAACGGGCGTTGATGGTGAA 6112 29 100.0 32 ............................. GCTGGCGCACCTTACGCAAAAATAGACGTAAA 6051 29 100.0 32 ............................. CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG 5990 29 100.0 32 ............................. GGGTTCTATTTCCTCGGGATTTGCCGACACGC 5929 29 100.0 32 ............................. GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG 5868 29 100.0 32 ............................. GCTGCCGCGCTTTCGGTGTGGGAGCAGTATGA 5807 29 100.0 32 ............................. AAACTCCGTGGTGTAGTGCGTTTGTTGGTGCG 5746 29 100.0 32 ............................. TTGGTATTAACGGGAATGTAGTCACTCCAGGA 5685 29 100.0 32 ............................. GCGATCGTATTTTCCGCTACGTCGCTCAAATG 5624 29 100.0 32 ............................. TCGTTGATGGTGTGATGAGTGTACAAAAAAAA 5563 29 100.0 32 ............................. ACGACTGAATCCGGCGAGGCTATCAACTGGCC 5502 29 100.0 32 ............................. CCGCACACGTCGAGCTGGTGGGGATTAATGCT 5441 29 100.0 32 ............................. CAGTAAACGTTCGCGCGTTCTCGCGCTCACGA 5380 29 96.6 32 ............................C TCTGTGTATTCGCTACCAGCCAGCACCGGTAC 5319 29 100.0 32 ............................. CAGGGTAACTGGCTGCTCCTCAACCATTCCGC 5258 29 96.6 32 ........C.................... GGGTTTTAGCGACCGGACCAGAGTACGCAACA 5197 29 96.6 32 ........C.................... TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT 5136 29 96.6 32 ........C.................... GGAGTGATGAATTGGAAGTAACGGATAACCGC 5075 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 22 29 99.4 32 GTGTTCCCTGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCTGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //