Array 1 7674-9293 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTI01000025.1 Streptobacillus moniliformis strain VA11257/2007 contig_67, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7674 36 100.0 30 .................................... TGGCGCAAGAAGATTTAATAAGAACGGAAA 7740 36 100.0 30 .................................... ATCCTCTATTAGCAGGTTTAGGAGGTGCGA 7806 36 100.0 30 .................................... CGATTTTAAAGAAAAAAATAAAGAGTAGGC 7872 36 100.0 30 .................................... AGCTTTCGAAAAACAACAAAATATTGCGGA 7938 36 100.0 30 .................................... AGGAATTACAAAATTTCAAGTGAATAATAT 8004 36 100.0 30 .................................... ATATGTTGCAGGTGGGATTATAGAGCTTGA 8070 36 100.0 30 .................................... TGACTTCATTTTTTATGCCGAAAATCACAT 8136 36 100.0 30 .................................... TTTCCTTTCTAAAAAAGCATTTCGTTTGGA 8202 36 100.0 30 .................................... AAGCAAATGGAATGTCGGTTCCTGAAAATA 8268 36 100.0 30 .................................... GTTTTGTATTGTTATAAAGTCTTCATTTAA 8334 36 100.0 30 .................................... ATTATAAAATTATAGAAGATATCGACGAGT 8400 36 100.0 30 .................................... ATTATAAAATTATAGAAGATATCGACGAAT 8466 36 100.0 30 .................................... TCAAAATATCGTGTGTGGAGATTTAAGGCC 8532 36 100.0 30 .................................... AAAAATAAAATATATTTGCGCTGGCGAATA 8598 36 100.0 30 .................................... CACTGACACCAAGTTTTTTGTCTTATGTGT 8664 36 100.0 30 .................................... AATAAAAAATAACGGAAGATCTGCTGGTCA 8730 36 100.0 30 .................................... TTTTAAGTCATAACATCAATAGAATGAATA 8796 36 100.0 30 .................................... GATTTTTGTTTCATACAGATCTCTTTCTTT 8862 36 100.0 30 .................................... AGCACCTACAGAAAAAAACGGAATGGGAGT 8928 36 100.0 30 .................................... CACTGACACCAAGTTTTTTGTCTCATGGGT 8994 36 100.0 30 .................................... TAAAAGAATTACCTAAACATGCTTTAGGGT 9060 36 100.0 30 .................................... TGAAATCGTAGAAATATATTAATCGTTACT 9126 36 100.0 30 .................................... AAATGGTCTGTCTTTAGAATATGCAAGCGA 9192 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9258 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.1 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAA # Right flank : GTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //