Array 1 126022-123003 **** Predicted by CRISPRDetect 2.4 *** >NZ_VRYH01000001.1 Aidingimonas lacisalsi strain XHU 5135 Scaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 126021 29 100.0 32 ............................. CCCGTTACTGGCGCGTCACGGTGTCCGGCGCT 125960 29 100.0 32 ............................. TGTTTGTTGAGACGTATATCGATGATGGGTCT 125899 29 100.0 32 ............................. TCACGACCGCCGAGATTGTTCCGCTCTCGAAG 125838 29 100.0 32 ............................. ATGTTGATCATGCCGCACTGGTTTCCGGCCAC 125777 29 100.0 32 ............................. CCACCATTGCGAGTCGGATGCATCTCCATATC 125716 29 100.0 32 ............................. TCAGTGCCTTGCAATGGCCCTGCCAAGTCGAC 125655 29 100.0 32 ............................. CACGGCGCTAACGCTGGACAACCGCGCGTAGA 125594 29 100.0 32 ............................. TATCCTCCTGAGTTCATCGAAAGTGTTTACAA 125533 29 100.0 32 ............................. CTAGTGCGTTCGCCGGGAAGACTTCCTGATAA 125472 29 100.0 32 ............................. TCTGCATTTCCGTCAGAGTTAATCAGATAGTT 125411 29 100.0 32 ............................. CGATCCAAGATCCTCGAAGACGCCCGTAACGG 125350 29 100.0 32 ............................. GCTGAATTGAATCTGCCATGTGTACTCATCCT 125289 29 100.0 32 ............................. GTCTGGCTACGCTCTCGAATGCGATGGATGTC 125228 29 100.0 32 ............................. GTGGCCGTCCAGCTAAAAACCACCACCCAACA 125167 29 100.0 33 ............................. GTCAACCATAGCCAGTGCGCAGGCATCGCGGTG 125105 29 100.0 32 ............................. CTACTGCAGGATACGAAGGTTCAACAGGCGGT 125044 29 100.0 32 ............................. CCGGCCTATAACTTCGGCGGCCTCAGTCTCTC 124983 29 100.0 32 ............................. CACAGCGGCGCAGGTAAAGAGCCCCGCCAGTC 124922 29 100.0 32 ............................. GTGGCAACGCCAACGCGAACTTCAACTGGATT 124861 29 100.0 32 ............................. CGACGGAGCCGGTTTCCCGATGCGGTGAAAAT 124800 29 100.0 32 ............................. ATGACCTTTTCGTGTGGCCGGATGGCTATAGC 124739 29 100.0 32 ............................. TTCATTGCCCTGTACAAGCTGAGTGGTGGAGG 124678 29 100.0 32 ............................. GCTCATTTGGACACTCCGAGGAACTTGTCGGA 124617 29 100.0 32 ............................. GACGTCGAGCGCTCGACGCGCAAGATGACCTC 124556 29 100.0 32 ............................. TCCTCGACATCACCACGATTGCTCTGCAGCCA 124495 29 100.0 32 ............................. TGGCTACCCTCTTTACGCCTCTAGCACATCAC 124434 29 100.0 32 ............................. CGCTCGGCTGCCAAGCGTAGGGTGCCGATAAC 124373 29 100.0 32 ............................. TACGAGGTGAAGAAGCTGGCGATCAAACAGCA 124312 29 100.0 32 ............................. CTTCCGGATGGATCCGATCTTCCTGAAGGCAT 124251 29 100.0 32 ............................. TATGGATCCACCACAGATATGGAGGCCCCGAA 124190 29 100.0 32 ............................. ATGCCGATCAGCACGGCCACACCGACAACGGA 124129 29 100.0 32 ............................. GCAGGTGAAATAACCGCCTGTCTAGGCTGTCT 124068 29 100.0 32 ............................. GTAGCGCCAGCGGTGGCGACAGCGTTAGGTGG 124007 29 100.0 32 ............................. TGACCATTCCGGCGCGCCCCTATCTGGGGCTG 123946 29 100.0 32 ............................. CTACAGTAGTACTCCTGCTGGATCATGTCTTC 123885 29 100.0 32 ............................. GTCCAGAGCCATCATAAAAACCGTTCTCGACG 123824 29 100.0 32 ............................. GCTATAGCGTCGACCAGGTGCGGGCGATGCAC 123763 29 100.0 32 ............................. GTAGAGCAGGTGGCACCGGGATACGTCAAAAA 123702 29 100.0 32 ............................. TAGACGAAACCTACCTGATATACCGACTTTGT 123641 29 100.0 32 ............................. CCGCGCAGGCACCGGGCTTATCGGTGTTTTCC 123580 29 100.0 32 ............................. GTTGCCGCGTTGCTTCACGAACACGCCCCGGT 123519 29 100.0 32 ............................. TCTGGATGCCTGTATCTGGCGGCATTTCGGCG 123458 29 100.0 32 ............................. TCGATGCCCATTTTCTTAGCCGTGTCCTTGCG 123397 29 100.0 32 ............................. CAATCAGGCGCAGCTCCTTGCCGAATGGCTGC 123336 29 100.0 32 ............................. CCCATTTCGAGGGGCTGGTCTTCCTGCAGTAC 123275 29 100.0 32 ............................. ACGCGGAAGCCATGATCGACAGTGTACGCGAG 123214 29 100.0 32 ............................. GTCCAGAGCCATCATAAAAACCGTTCTCGACG 123153 29 100.0 32 ............................. ACTTCACCGCGCTGACGCTGACGGCTGGTCTG 123092 29 89.7 32 .C...........G............G.. TACTGGAATATCTCGATCGCTAATACTACGTC 123031 29 79.3 0 .C...........GT........TT.T.. | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.4 32 CTGATCCCCGCAGACGCGGGGCTCAACCG # Left flank : CGATATTGAGCCTCCGCCGCCTGCTTCGGAAGCAGTCCCCCCGGCAATACCTGAACCCGAATCGGTAGGCGACGCAGGCCACAGGAGTCAGTGATCATGGCAATGCTCGTTGTGGTAACTGAAGCAGTGCCTCCGCGCCTTCGAGGACGGCTTGCGGTATGGTTGTTGGAAATCAGAGCCGGTGTTTACGTCGGAGATGTCAGCAAACGTATCCGCGAAATGGTTTGGGAACAAGTGGAAGTTTTGGCGGAGGAGGGGAATGTCGCTATGGCTTGGGCCAGTAACCATGAATCAGGCTTCGAATTCCAGACTTATGGAGACAATCGCCGTGTGCCGATTGACCATGATGGGTTGCGTTTGGTGAGGTTTTTACCGCAAGAAAGTATCTAGTTGTTTTTGAAGGCTCTTTAAAAAATCAAGCTGATTGAAATTTGATCAAAATCGCTGGTGGAAATTCTGCTGGCGATTTTGTTCTTTATAAACAATAATCTACAATTAGT # Right flank : TCACATTTCAATTTGTGATGCTTCCTTTCGTTCGCGTTTATCTTACGCACACGCAGCTCAAAATCACTGGTAAACGTTTAGCTGACACGTGTCATCCGTTGGTATCACCCGGTTGTTGCTGGAGAAGCCGTCAATTATATTGCTCGCCGTGTTGATAAAACCGATGCCGTCGGCTGAACTCACTGATGTGATGGCCTGATGTGAACCAACAATAGGGGCGGAGACGATGACAACGGATGTATCCCAGGGCGGGAAGTTGACCCGCGTGCTGGCCAGAAAGGATGTTCTCGCGCTGGCGTTCGGTGCGATGATCGGTTGGGGCTGGATCGTGATGACGGGCGAGTGGATCCAGTCGGCAGGGAGTGCGGGGGCGATAACCGCGTTCGTGGTGGGCGGCATTGCCATCCTGCTGGTCGGGTTGACGTATGCGGAGCTGGCGTCGGCGATGCCGCAGGTCGGCGGCGAGCATGTGTACAGTTATCGGGCGCTGGGCCATTTTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATCCCCGCAGACGCGGGGCTCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGATCCCCGCAGGCGCGGGGCTCAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //