Array 1 6747-7367 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFW010000014.1 Catenibacillus scindens strain DSM 106146 Ga0415378_14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 6747 32 96.9 34 ...............................G ACGTACCATGTGCGGACGGAATAACAAGGAGTGT 6813 32 96.9 34 ...............................G TCAATATCCTGCCATAATCCATCCGAAAAGAGCG C [6822] 6880 32 96.9 33 ...............................G CAAACAACGACATGACTGTCGAAGAACTTTTTA 6945 32 100.0 34 ................................ TAACGATGAAAAGTGGTATAGCACGGGCAACATC 7011 32 96.9 34 ...............................T ATTTACGAACACTCCTGAGTCTACAAGATACTGT 7077 32 100.0 34 ................................ CGGAAATCGCTATCTATCCCAGGACGAAATGACG 7143 32 96.9 32 ...............................T TGGTTCTATTACGGCTGCTTTATTTGTATTAC 7207 32 100.0 32 ................................ CCTGATACATATAATACGGATGGACCATTTTG 7271 32 93.8 32 ................A..............T CCAGGCCTATATTTTCCAGCGCTTCATAGATC 7335 32 71.9 0 .......A...A..AAAC..A.....T..G.. | T [7340] ========== ====== ====== ====== ================================ ================================== ================== 10 32 95.0 33 GTCGCCCCCTCGCGGGGGCGTGGATTGAAATA # Left flank : AATGATATGTTTCCTCATACGGGTGACATTCATGCTGGTGTCTCGGGGCATGTTGAGACTGTGGTGTTTCTTTCCAAACTTAAAACAGATAAACATATTGAAGTGGAATTGGAAATGGATGAACTTGGTAGTTGCGGAGAGTAAGGACTGTAGGATATTTTTGATTGGAGGCCTCGTATGTCGAATGATATTTTTGCAAGATGCATGGCAATTTCTATGTCACATTTTTTAAATACACCGTATAAAGAGCAGACTATCACAGAAATGTATGCCCATTTATCGAGAAACTCATATTATGACAGAAGTGTATGGACGCGGATAAAGTATGAGGCGAACAGGAAGCAGACATGAAAATGCCGGGGGATTCGCACCACAAAAAATGCACAAATGAAGTGTATTTTACAAAAAATAGTAAATTATAAAAAGTAAAATAATGTTTATAATTTGAAAAATTGTTAATTTTAGCTGAAAATAGTAAAGGATTTTTGGCTGAAATTGCT # Right flank : ACAGAGCTTTTGCTTAATATTCATGTTAAGTTAGACAGATATACTGCTAAATTGAACGAATATGGTAAGCAAGGGTGAAGATTGATTTCCGGAACATATGGATGGAAATATTCAATTTTCGAGGGGAAAATTGAGGATGAAGAAGGATGATAAATCTAAATTATTAACGCAACCAATAATAACCTTTGATCCTGATGAATTAGGAGGTGCAGTATGAAGATCGAGATTAGAAAGGATTTTCCGCAGTATTTTAAACCGGCATATCCGGAGGAATTTGATTTGTTTTCTCATTTTGAGGTAACGGCAGGAATACCGAACGTTCTTTTTGCTATCACGACTTGGAAAGAAAACGGGAAAACGAATGTTTGCTTTCATTCCTGGAGTTGTTTCCACGGAGATAAGACTGCTTTTTTCGCTGTGATGGGAAATTTATATCAGCATACCCACACCTATGCTAATATCCAAAGGGAAAAATGTTTTTGTATCAATTTTCTTCCGAT # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCGCGGGGGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.50,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 149613-147554 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHFW010000001.1 Catenibacillus scindens strain DSM 106146 Ga0415378_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 149612 33 100.0 34 ................................. GCTGTCCTGACAGCCTATAAGGCCGGGACATATT 149545 33 100.0 34 ................................. GTGGATGAAATTATCCAGGATAATGTGCAGTTTG 149478 33 100.0 37 ................................. CACCAATACTTATTTCTGTGTCAAAGTGATCAATAGG 149408 33 100.0 34 ................................. ATATTGGTGGAAGGAATTTGATACATATAAAGTG 149341 33 100.0 35 ................................. GACACCCTGGATGCCCTGTGGTCCCTGTTCGCCAG 149273 33 100.0 35 ................................. GTAAGATAATTGCCGCTCCGCCAATATATGTATTT 149205 33 100.0 34 ................................. TTTGAATATGCAAACTTCCACAGTCAGAGGCCAA 149138 33 100.0 34 ................................. ATACAATAAATCAGCACTACGCATTAGATGTACT 149071 33 100.0 33 ................................. GCTTAATTTTAATCCGACAATCTCCAGGATCTG 149005 33 100.0 35 ................................. CCGTCAGCGCCGGCAGGCCCTTGTGGCCCCGGCGG 148937 33 100.0 35 ................................. ATCCTGCTGGATTCTCCCTACAAGACCGATTCGAG 148869 33 100.0 33 ................................. TCGAGTAAAACTTCTCCATCGAAAATCGCTGGC 148803 33 100.0 34 ................................. TTCCACTGGCTGCTTGTATCTCTCCCTCGATATA 148736 33 100.0 33 ................................. TTGAAGAACCAGACGGAATCATGGTGCAAAATA 148670 33 100.0 34 ................................. AAGCGCAATGGGTATAAAAGTAATTAGCTTATCA 148603 33 100.0 34 ................................. ATTTTGGCAAAGGGGGACAATTCTACATCGTCCC 148536 33 100.0 35 ................................. GTATGATGTAGAGCATATGAGCGTATACATTGCAC 148468 33 100.0 35 ................................. TGATTTTCTGAATAGCGCTCAATACAAACGACTCG 148400 33 100.0 34 ................................. ATGTATCATTGGCAGTTCTATCTTGGCGGTTTTG 148333 33 100.0 35 ................................. GGGTAACTGCCCATGCCCGGAATTGGTTACAGCGC 148265 33 100.0 35 ................................. GCATGTACGAAGCCTTGAAAGAAAAATTAGATCCG 148197 33 100.0 36 ................................. AAACAGTCGGTGACAAACTGCAATAAAACTCTGGCA 148128 33 100.0 35 ................................. TCCATACAAATATCACCGGACACGAAACCAATCAG 148060 33 100.0 33 ................................. ATTCATGCCTAAGATATCCAGACCAACATCTAA 147994 33 100.0 34 ................................. TACAACTCCCGGAATAGCTTTCTGCCAATTCAAT 147927 33 100.0 35 ................................. GTAATAAATACTGGGAAAATATCGTTAGAACTGAA 147859 33 100.0 35 ................................. GTATCGCCGTGACCTGTCCCTACTTACAAGATTAT 147791 33 100.0 36 ................................. AGTACAGTTTTGTTACGCAACACCCGAGGGAGTAGC 147722 33 100.0 35 ................................. TGTCACAGCAAATTTTGAATGGCTCGGAATAATAT 147654 33 100.0 35 ................................. ATTGCTCTTAATACTCGAATGATTCAAGAGTGTTT 147586 33 93.9 0 ...............................GA | ========== ====== ====== ====== ================================= ===================================== ================== 31 33 99.8 35 GTCGTCCTACGTAAGTAGGACGTGAATTGAAAT # Left flank : CCGGAAGCGCCTGCAAAAAGTTGCCAAACAGTGTGTCAACTATGGCCAAAGGGTGCAAAACTCTGTTTTTGAATGTCAGTTGGATTCTGTAAAGTATCGAGAGGTTCGTGAAAAATTGGAGAATCTCATTGATAAAGATACAGATAGCCTAAGATTTTATAATCTTGGGGATAAGTATAAAAGCAAAGTGGAGCATATTGGAGCAAAACCTGGGTTTGATGTAACAGAACCGCTTATTTTTTTTGATTGACTCACCAAAATCCTTCTTTTGCAAGAGTAGGAATGGACGATATATCTGTAAAATGTGTTATGATTATTCAGTGTTTTTCGGTGCGAGTCCTATGTATCCGGTATATCGCGGGAGATTCGCACCAGAAAAATTATATAAAAATTACGTTGAAAGCGTAATAAAAATGAAAACTTAGGAGAAAAGAAGATAAATATTGGTGAAAATGCTTTGATTACAAAGGAATATGTCATGTTTTTTGTGCGTGATTGCT # Right flank : ATGTGATTATAACCGGGAGAAAAAGCTATTTAATTAAGGGTTGATATATGAAATTTTATCTTATGGTAAAAATATTTTGGTGTTAAGGTAAAATAGAATTTTTATGTTTTTATCTGTAATGTTTGATATAATAGATACATCTCTTAACATACGAGGCATACATATGATTGATTTACTGTACGCCCAACGCATTTTTGACCAATATCTTGATCAATTCTGCCGGGAGGATGAAAAAATAAAACTAAAGATTGTACATACCCAGGGCGTGATCCGGTGCGCCGGGGAGATCAGTGCGCGGATGGGCCTTGGCGCCGGAGAGCGGGAGCTGGCCGGGCTGATCGCCCTTCTTCACGATATTGGCCGGTTTGAGCAGCTCAAACGATTTGACAGCTTCGAACCTTCGGTGATGGATCACGCTGCTTACGGCGTTGAGCTGCTGTTTGGAGAGCGGAAAATGATCCGGGATTTTATAAAAGAAGATACATGGGATCATATTATCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCTACGTAAGTAGGACGTGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.58%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //