Array 1 17-472 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHSI01000223.1 Cereibacter azotoformans strain YLK20 NODE_256_length_2024_cov_45.136364, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 17 29 100.0 32 ............................. TATTTCGGCGGCGTGCGCGGCTCGGCGCCGAG 78 29 100.0 32 ............................. GCCGAGGGGTTGCGGGAGGCGGTGGGGATTGC 139 29 100.0 32 ............................. TTCGATCCGTTCAAATGGCAGGAGGTGAAAGC 200 29 100.0 32 ............................. CTGCCGCCTTACACGGACTGGGTGACGGGCCA 261 29 100.0 32 ............................. GCTGATCCCGCCGGCCTTGCGGACAGGATCGT 322 29 100.0 32 ............................. TCACGCCGGTCGGTGTGCTCGATGCAGACGCG 383 29 100.0 32 ............................. CATTACGACGTGCCCGAGACGGAAGATCCGTG 444 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 100.0 32 CCGTTCCCCGCACGCGCGGGGATGTCCCG # Left flank : GGCAGGAGGTGAAAGCC # Right flank : GGCTGGCGACATTTTCTCGATCGGCGAGGGAAACCGTTCCCCGCATGCGCGCGCCACGGTGATCCGGCCACGGATTCCATGAACATCCGGCCACCCATTCCACGGCGATCCGGCCACCTGTTCCACGGGCATCCGGCCACCCTCGTGTGAGGGCTGCCTGCGGGGCAATCTGAAGCCGCCTGTCGTGCCTCGTTTCGACGTGGACGGGGGCGAGATGCGAAGGTTGCCGATGAGGAAGATCAAGGATGTGTTGCGGCTCCACGCAGCTGGCCGCTCGGCTCGCCAGATCGGGGCGAGCGTCGGCGTCGGCCGGAGCACGGTGGCGGAGTATCTGCGCCGCGCCGATGTCGCGGGCCTGTCCTGGCCGTTGCCGGAGGAACTGGACGAGGAGGCGCTCGAGCGGCGGCTGTTTCCGCCTCCGCCGCCCGCGCCGGGCCGCCAGTTTGCCGAGGCGGACTGGGCGGCGGTCCACCGCGAACTGAAGCGGCCGGGCGTTACCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACGCGCGGGGATGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [10.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 2571-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHSI01000055.1 Cereibacter azotoformans strain YLK20 NODE_55_length_16498_cov_44.660141, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2570 29 100.0 32 ............................. TCCTCCGGCTTGTATTCCGGCAATGGGAGATC 2509 29 100.0 32 ............................. AAACTCCCGCCGATGCTGGTGCAGCATGGCGG 2448 29 100.0 32 ............................. CTGGCGCGCGAGGCCATCGGCCTTTCGGTGGC 2387 29 100.0 32 ............................. GGGTCGATCCGCTCAGGCTCACTGACGAGACA 2326 29 100.0 32 ............................. CTGCCCCGCCAGAAGGGCGGCACCGGAGGCTA 2265 29 100.0 32 ............................. AGCATTGCCGCCGGTTACGCGCTGGCCGGGGA 2204 29 96.6 32 ............................T GGATCTCCGCGGACACGCAGGCGGTCGAGCTG 2143 29 100.0 32 ............................. CTCTTCGAGCGCAACATCAACGCCAACGGTGA 2082 29 100.0 32 ............................. CAACCCGCAGACAGGTGGAAGATGAAATCGCT 2021 29 100.0 32 ............................. GTGCCTGACATGTATGCCCCGATTGCCCGCAT 1960 29 100.0 32 ............................. TATGAGACCTGGTCGCGTCATATCGACGAGAT 1899 29 100.0 32 ............................. CGGTCGCTAACCACGAGCGATTTCCACCCCTC 1838 29 100.0 32 ............................. GGCTGGGGCGCGCCGGATCGAGACGATGACTG 1777 29 100.0 32 ............................. CCGATGAGCGTGCCCGCGTTCGAGCGGGGAAG 1716 29 100.0 32 ............................. CCCGCGCGATGCTTCGGGAGTTTACGCAATGA 1655 29 100.0 32 ............................. CCATCGTTCGTAGCTCTGTTAATGCTGTATGA 1594 29 100.0 32 ............................. TCCGAACTGCCTTTGCAGGTTCGCAGCGGCCT 1533 29 100.0 32 ............................. CCGCACAAACCCAAGTCCGAGTAGCTGCCCAG 1472 29 100.0 32 ............................. ACGTGGCAAGAGTGTATGAACATGGCCCGAGT 1411 29 100.0 32 ............................. CTGCATGATGAGTCCTTGAATGCTGCCATTGA 1350 29 100.0 32 ............................. ACATTCGTCAGGACGGGCGACTTGTTACGTTC 1289 29 100.0 32 ............................. ATCAGCTTCGGAGTGGCGCAGACCAGCGGCGC 1228 29 100.0 32 ............................. CTGTTCGGCAGCTTGATGTAGCCGTTGGAGCT 1167 29 100.0 32 ............................. TCGGAGTTGTGGCCGCGCGCACCGGAGAGGTA 1106 29 100.0 32 ............................. TTGGTCACCGAGGCAGCAGCGGCGCCACCCAT 1045 29 100.0 32 ............................. GTCCCCAGCCGCCATTAAAGGCGCGCGTGAAC 984 29 96.6 32 ........A.................... AATTCGCGCGGGCATCGTCCGATGTAGTGATA 923 29 100.0 32 ............................. TTCACAATGCCAGCAGGCGCCGGGTTGAACTG 862 29 100.0 32 ............................. TCCTTCACCGGGCCGGAAATCCGCCAGACGCT 801 29 100.0 32 ............................. CGTGTCCACTGGAAGAGCGTCGTCGAGGAGCT 740 29 100.0 32 ............................. GCGGCCGAGCGCGCGTTCGACAGCTACCAGTC 679 29 100.0 32 ............................. CCAACGCTGCTTATGCGGCGCACAATATCCGA 618 29 100.0 32 ............................. GTCGTGCCCTTGGCGTTCGAGGCCAGGTTTTC 557 29 100.0 32 ............................. TGTGCCTTCCGGTATTCCTCCAGATCGGCCTC 496 29 100.0 32 ............................. ATGATCGGCGCGCGGAAGGAGAAAGGGTCGAT 435 29 100.0 32 ............................. GCGCCGTGCACCGCACGATCCGCGAGATGGAG 374 29 100.0 32 ............................. CCGCCCCCGGCCCCGTGCACCGCGCATGGGAC 313 29 100.0 32 ............................. TTTCCGGGGGTGCGGATATTCGCCATCCCCAA 252 29 100.0 32 ............................. CCTGCGGATGCCAAGCCCAACGAAACCCCGGC 191 29 100.0 32 ............................. GATGTGGGCACGAGGCTCGAGGATCTGGCCCC 130 29 100.0 32 ............................. TTCGATCCGTTCAAATGGCAGGAGGTGAAAGC 69 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 42 29 99.8 32 CCGTTCCCCGCACGCGCGGGGATGTCCCG # Left flank : GGCTTCTGTCGCGCATCATCCCGGCCATTGAAGACGTCCTCTCGGCCGGGGATCTGCCCCGCCCCGATCCGCCGCCCGAGGCGATGCCTATTGCCATTGAGGACCGTGCAAGCGGCGACGAAGGCCATCGCGGATGATGGTCGTGGTGGTGGTCAACGCGCCGCCCCGGCTCCGCGGCCGGCTCGCGGCCTGGCTGGTGGAGCTGCGGGCCGGTGTCTATGTCGGAGACTACTCGGCCCGGACGCGGGAAATGATCTGGGAGCAGGTGCTCGGAGGGCTCGATCAGGGGGACGCGGTGATGGTCTGGAAGGCACCGACGGATCAGGGCTACGACTTTCGCACCTGCGGCAAGAACCGCCGCATGCCGATCGATTTTGACGGCCTCAAGCTCGTGAGCTTCTTCCAAGCCAAAGAGAACTGACACCGCGCCACGAGGGCCAAAAGCCGGTGCGCTGTTTGACATTGTAAAAACCCTTGTCCATCAGTCTTCTGCAGGAAGA # Right flank : GTATTTCGGCGGCGTGCGCGGCTCGGCGCCGAGCCGTTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACGCGCGGGGATGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CCGTTCCCCGCACGCGCGGGGATGTCCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //