Array 1 2893596-2891778 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFVS01000001.1 Chryseobacterium indoltheticum strain NCTC13560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2893595 47 87.2 30 C.AT.TCG....................................... TAAGAGTAGCAGGCAAAGTAATATTTTACG 2893518 47 100.0 30 ............................................... AATTTTAAACACCGACATTCCAGCTGACTT 2893441 47 100.0 30 ............................................... TATTGAAAATATGCCTAGAGGCGCTACTTT 2893364 47 100.0 30 ............................................... ATTATCTTCAACGACAAGCACCCATATTTC 2893287 47 100.0 30 ............................................... TATCTTATTGTTTGTAATTATAGTTTCATA 2893210 47 100.0 30 ............................................... CGTAAAGATTATGAAGCCCCAGGAGGGTTA 2893133 47 100.0 30 ............................................... CTTCTGACAATCTTTGTAAAGCAAGCGCTT 2893056 47 100.0 30 ............................................... CCGCCGTAGATAATTACAAAACCTTCACCC 2892979 47 100.0 30 ............................................... TTTTTGAATAATTCAAACAACAGAAGCAAT 2892902 47 100.0 30 ............................................... AAAGGTTGAAACTATCAAGTGGGTAATTGG 2892825 47 100.0 30 ............................................... ATTTATGGAATTTCTGTATTTAAGATGTTT 2892748 47 100.0 30 ............................................... TACGACGGCATGTCGGGAATGCTGGCGAAC 2892671 47 100.0 30 ............................................... GCAAGAGGAACTGCATCTGAAGGCAATATA 2892594 47 100.0 30 ............................................... TGGGGTCGATGGATATGTAGACAGAAAGTC 2892517 47 100.0 30 ............................................... TAACGTCGCCTTATATACCGTATGGATCCT 2892440 47 100.0 30 ............................................... TTTAAGTAACTTAATACGTCCAATACTTTC 2892363 47 100.0 30 ............................................... CTGTGACTTATATCTCCATACTCTCCCACT 2892286 47 100.0 30 ............................................... AAACTGATCTCTTTTTTATTATCCATGGCT 2892209 47 100.0 30 ............................................... CTAATTCCGAAAGGTAAGTACTCATAGGCA 2892132 47 100.0 30 ............................................... CCTGTTATTTTAGTTAAACTGTGAACTGTC 2892055 47 100.0 30 ............................................... TTGGAGATTCCAAACCATCTGCGGTTATTT 2891978 47 100.0 30 ............................................... TTCAAAATAAGTCTTCCCAGTGTAGTGCGA 2891901 47 100.0 30 ............................................... AAAAGATGGCTCAGGAAAATAATCTATTGA 2891824 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 24 47 99.5 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : GGACTAATAATATGAGCCGTCCAACCCTGTTGTTCCAAATGTTCTTTTGGAGATTTCAATTCACTTTCCTCAAATCCGTTTGTTGCTAGAATTGCAATTTTCTTTGACATAATAATATTTTTTGGTGTTATGATAGATATGTAAGAAAATATGATGCCTACTCCGATTATTGTGGTATTAAAAAATGTTAAAATTTATTTTAGAATTCTTCATTATTCCAAATATAATTAGCTGAACAAAAATTACGATAAGAAGTTTAAGAATAAAAGATTTTTTTGATGTTTTATGTCTAAAAATCATCATCGCTAACAATGCTCCCAAAGTACCTCCTAAAAAAGTCAAACTCAGAAGAAATAGTTCTGAAACTCTTCTTTTGCTTTTTTTGGCATACCATTTATCTGCTCCGAAAACTATAAAAGTCAAAATATTTGACACCACAAGAAAGTAAATCATTCGCAAAAATAGGAATATCTTTTATGAATATTCTTTGGGATGTGATA # Right flank : CTCAAAATTTAACCCATTGTTATTCAGTGGGTTTTGTTGTTTTTTAGGATTTGAAATTTAGAATAATTCGAGTTGTTGGAAGGTGGGCGGCGGTTCTTCTTTATTTCTGGAAAAGAATATTTCTATGTCGCCAAATTGCTTATCGGTAATACACATGATGGCTACTTTTCCTGCCTTTGGAAGATTAAACTTCGTGCGCTTAATGTGCACCTCAGCATTTTCGCGACTTGGGCAATGGCGAACATACATGGAAAATTGAAATAATGTAAAACCATCATCAATTAGGCCTTTACGAAAGCGGTTGGCATCTTTCATATTGGCTTTGGTCTCCGTTGGTAAGTCGTATAATACTAAAACCCACATAATTCTGTAAGCGTTAAACCTTTCGGCATTCATTTTTCATGGTTTTGTTTTGCGGTATAATGGTTGCAGCCCGACTTGAGCGGAAATCCTTTTTTGCATGCTCTCAAGTACTATTTAATGTGAAATTGTCTGCAAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //