Array 1 34964-36555 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUJH01000025.1 Ruminococcus sp. AM29-12LB AM29-12LB.Scaf25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================================================================================================================================================== ================== 34964 30 100.0 36 .............................. AAGTGCTGCCCTCGTATGTTTTTGATACGACTACCA 35030 30 100.0 34 .............................. AAGCAGGCACTCAACAATATTGAGACCGTTTTTC 35094 30 100.0 36 .............................. CTTCTTTCCTTCTTTCTCTGCCAATTCTGAAATCTT 35160 30 100.0 34 .............................. ATATATCCGCGAATTGTTTTCGCAGCGCTAATCG 35224 30 100.0 37 .............................. TCAATATCCACTGCCGCTCCTTTAGGATGGAGCATCC 35291 30 100.0 34 .............................. CGCATTGAATCTTCATAGCTTCTTTCAGAAAGGC 35355 30 100.0 39 .............................. GGGGCGAGTGATAAAACGTATAACCCGTGATAATTCCTA 35424 30 100.0 36 .............................. GATTATAAATTGTGAAATTGTATGAACTGATAGCCG 35490 30 100.0 34 .............................. GCAACTACTTCGCTTACTGAATCAAACAATTCCA 35554 30 100.0 36 .............................. TCGCACAGGCCACTGTTGATTCCGTCAAGTTTGCTA 35620 30 100.0 35 .............................. ATGATATCCGGGTTCATCTTTTTTAGTCCGTTCCA 35685 30 100.0 34 .............................. ATTTTCAGTGCAAGGCTTTTCGAAAACAGTGGCG 35749 30 100.0 35 .............................. TCATCTTTTACTTCTGGTTTCTTTGGCTCTATATC 35814 30 100.0 35 .............................. ATATATAAAAGAGAATATAGGTAAAGTAGACGTTA 35879 30 100.0 35 .............................. AATGCAAATCCTGCGATCTTGGGTAATGTGATTTC 35944 30 100.0 35 .............................. ACTGAACCAAACCGAAGAACATGTTACACAGATCC 36009 30 100.0 37 .............................. TAATTTCCATGGTTCGGACTTTCCGGATATGTTCCTT 36076 30 100.0 36 .............................. ATTATTAGCCCTTGGATAATCTATTTCGCTAGTAGA 36142 30 100.0 222 .............................. GAACCATCCTGGATTTGCTATGAGTGGAAGAAAGAGTGTGAACTTCCTGATATTTTAACTCTCGTTTTCTAAAATGCTTATTTTTAGCCATTTACAGCATATTTTGAAGTGATTTTACGAGAGTTAATTAACTCTTAGTTTTTCTCTCATTTTTTGCTGAAAATATCGAAAATATGCCATTTCTGCTTAGCGAGAGTTAATTTTATAGGAAGTTCACAAAGA 36394 30 96.7 36 ................T............. ACAAATACGGAGTTGTTACAGCAGAAGCAGAGAGCA 36460 30 96.7 36 .............................A TTCTGAAAGTCTACACCACTTACATCCGGATTCTCC 36526 30 90.0 0 .........A......TA............ | ========== ====== ====== ====== ============================== ============================================================================================================================================================================================================================== ================== 22 30 99.2 44 GTATTAATAGAAACATCGTGGAATGTAAAG # Left flank : ATTGGCGAAAAAGAATATGAGGGATTCAGAATATGGTGGTGAGTTATGTATATAGTATTAGTTTATGATGTAAGTCAGGAAGAAAACGGTGCAAGACGCTGGTCAAGAATTTTTAAAATATGTAAAAAATATCTGACGCACATCCAAAATTCTGTATTTGAAGGTGAAGTGTCAAAAGGACAGCTGGCACAGCTGCAAAAAGAATTAAAAGAGTATATTGATAAAGAATTAGATTCTGTAATTATTTTTAAATCTCGGCAGGAAAAATGGTTGGATAAAGAATTTTGGGGTAGGAAGGATGATTTAACGAGTTTCATATTATGACTGTCGACGTCAGATAGAGTAAAAACTTCAGGAGGTCGACAATGCTTGAGATATCAGGAAAATTTCAAAAATGAGAGCTGTCCAGAAAGATAAAAATAAGTATAAAATAATGAAGTGACAAGATTGACAGAAAGTGGTAAGATTATATCTGTATTGTAAGGATGAATAGACGACGG # Right flank : GAAATTTTGATAGACGAATTCAATAACAATATGTTACACTTTATGAAAGTTAGAGTTTAATATATCAAATATAAAGGGAAGTGTGTCTATTGAAACAAATTAAAAAGAAACTTCCAATAGGAATAGAAAATTTTGCAAAGCTTCAGGCGGAAGATTTCTACTATGTAGATAAAACGATGCTTATCAAAGAACTTCTGGATAATTGGGCGGAGGTGAATTTGTTTACACGTCCGAGAAGATTTGGTAAAACACTGAATATGAGTATGCTGAAAGCATTCTTTGAATTAAACGGTGATAAGAACTGCTTTAAAGGAACAAGAATTTCCAGAGAAGTTTATCTTTGCGAACAATACATGGGAAAGTTTCCTGTGATTTTTATTTCCCTGAAGAGTATCAGCGCACAAACTTATGAAAAAGCCTGTGATATGGCAATACAGATTGTAAATGGTGAGGCGCGTAGATTCCAGTATTTATTGGACAGTGAACGTTTGACGGAATAT # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.86, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATAGAAACATCGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //