Array 1 995241-992957 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006804.1 Lacticaseibacillus rhamnosus DSM 14870 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 995240 36 100.0 30 .................................... TACCTCACGTTTTGACTGGTGGGTAGGCAA 995174 36 100.0 30 .................................... CGTCTCGTCTTCCAATAGTGACAGTCCTTG 995108 36 100.0 30 .................................... TGTAAGGTCCAACTATTCCCTTCTCCCTTC 995042 36 100.0 30 .................................... GAATGTTGAGATCGATTTGCTTATAGATGA 994976 36 100.0 30 .................................... GAGAAACAGTCCTGCCACTTTCAGAGCTTT 994910 36 100.0 30 .................................... TCAAGCACAAAGAAAATGACCGCAACGAGT 994844 36 100.0 30 .................................... GGACAGCATGTACAAGCAACCAAAAACTGG 994778 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 994712 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 994646 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 994578 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 994512 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 994446 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 994380 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 994314 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 994248 36 100.0 30 .................................... CGGGCGAACGCAATGGTCTTCGCTGACAGC 994182 36 100.0 30 .................................... AATAGCAACCGAAAGCGCTCCAGTGTCGCC 994116 36 100.0 30 .................................... GTAGTGCATACCATCATCACGAGTGCCGTT 994050 36 100.0 30 .................................... TGAACACGATGACGTAAAAGAAATGTATGT 993984 36 100.0 30 .................................... GAATGTTTTACCATCGGAACGCGTGGTAAT 993918 36 100.0 30 .................................... AATAGCCAAGTAAATACCGGCACGATTTAC 993852 36 100.0 30 .................................... CAACATCAACAACAGCCGGCAATTGCTGCC 993786 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 993720 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 993654 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 993588 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 993522 36 100.0 30 .................................... AAGTTCGGCCTCAACGGTGTACCACTTTCC 993456 36 100.0 30 .................................... TGCTAATGATACCTATCCGGACTTGTTTCG 993390 36 100.0 30 .................................... TACAAGGATGGCGGCAAGGTTTGGCAAGAC 993324 36 100.0 30 .................................... CAATATTTTGCCCCTTGTTCCGTTGCGCCA 993258 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 993192 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 993126 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 993060 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 992994 36 86.1 0 .......................AA.C....G...G | T,C [992960,992966] ========== ====== ====== ====== ==================================== ================================ ================== 35 36 99.6 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //