Array 1 73626-74143 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXVX02000009.1 Alcanivorax sp. ZXX171 9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 73626 29 100.0 32 ............................. TCTTCCGGTTTTACCGATAACCAGTCGTTTCG 73687 29 100.0 32 ............................. CGTGGATCAGGGAAAACATGACGCCGCTGGAA 73748 29 100.0 32 ............................. ATCCGGGTGTTCGACGCGGATGGGGCGGCTCA 73809 29 100.0 32 ............................. CCGAACGCGCACTCCACAGCGTCCATATTGTC 73870 29 100.0 32 ............................. ACGAGCGCACGCCGCCTGATTGCGAGGATGAT 73931 29 96.6 32 ............................A GCCGCTGATGGCGCGGCGATCTGCACGGGCAC 73992 29 100.0 32 ............................. ATCCACATCGGGCAGGCGTGGTGCATCCCGCT 74053 29 96.6 32 .......................A..... TCCTGGGCCGCGACACGGTGGAGGAGATCGCC 74114 28 89.7 0 ...........A...........-..G.. | GA [74134] ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.1 32 GTGTTCCCCACGGGCGTGGGGATGAACCG # Left flank : CCTGGTCTACCCGGAAGGCAACTTCATCGAGTGCACCGCCGACACGCCGTACTTCCAGATCGGCGAAACCAAGTACGGCAAACCGATCCTGGACCGGGTGATCGACTACGACACCCCCCTGGACGACGGCATCAAATGCGCCCTGATCAGCATCGATTCCACCATCCGCTCCAACCTGTCCGTGGGCCTGCCCCTGGACGTGCTGCGCTACCCCCGCGACAGCTTCAGCGACCAGGCCCACTTCAACGTGGACGAACACCACGAAGGCTTCCGCCAGCTCGGCGAAGCCTGGTCCCAGGGCCTCCGCGACGTCTTCCAGCGCATCCCCGACCTGACCTGGGAGTGAGCCCGCCGCCCGGGCGGCGACAGGGCGATGGGCCGCATCAACGAGCCCGCGAGGCCGAATCCGGCCTCCGTTTTCATCGGTTAACTTCTGATCAATTTGTTCGGTGGAATTTTCCGGCCTCGTTTTGTTCTTTTTAATCAATGAGATACATTTA # Right flank : GAGGTTGCCGATTTGCCGCGCGTGCGATGGTATCGGCTTCAACCCCGGGTTGCTCTGATTCGGGAGCGATAGTATATTCCATGGTATATATCATATTCCTGGAGGTGCTTCATGACCGATACAGCGAAGGTATTCATGAGTGGGCGGAGCCAGGCAGTGCGGCTGCCGGCCGCGTATCGCTTCACTGAAAAAGAGGTTTTTATCCGCCGGGACCCGGTAACCGGGGACATCGTGCTGAGCCCGCGCCCGGAAAGCTGGGCGGGCTTCCTCGAAGCTCAGGCCCGGACCGAGGTGCCGGATGACTTTCTGACACCGGATGACCGTGCCGCTCGCGATGCGCATCGCGACCCTCTTGAGGGCATGGATCGTGGCTAGATTCATGTTGGACACGAACACGGTAAGCCATTTGCTGCGAGGTCAGCCCGCCGTCGTCGCGGCCGTCACGGCTACTTCAATTGGTGAGCTCTGCATCTCGGCCGTCACCGAGGGAGAGTTGCGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 75238-77954 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXVX02000009.1 Alcanivorax sp. ZXX171 9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 75238 29 100.0 32 ............................. CGGGCATCAGTCAGATCCTCCGGAAAATTTGC 75299 29 100.0 32 ............................. TGCTGGCTGACCAGGTTAACCAGCTGGTCGCC 75360 29 100.0 32 ............................. ACGAATTGAAGGAAAACGTATTCGCTGTCGCA 75421 29 100.0 32 ............................. AATGCCGATAGAGGCTAGAAGCATATTGGCAT 75482 29 100.0 32 ............................. AATGCCGATAGAGGCTAGAAGCATATTGGCAT 75543 29 100.0 32 ............................. CCACACAGCTGATGGGCTGGACCAGCGACTAC 75604 29 100.0 32 ............................. CTCATCATCTTCGACACCTTCAACGTCTACCC 75665 29 100.0 32 ............................. GTCTTTGAGAGTGGCGCCAGACAGAGACATGC 75726 29 100.0 32 ............................. GGCCAGCCGGTTTGCTCCGCGAGGAACACGGC 75787 29 100.0 32 ............................. CGCCTGATCCGTGATCTTGAGGCCGACGGCGT 75848 29 100.0 32 ............................. TGGCGGCGAGGGGCGAGGCGGGGTATCGAGAA 75909 29 100.0 32 ............................. ACATTGATGCCTTGGGGAAAATCACCGCTGCT 75970 29 100.0 32 ............................. CTGGGCATCAACCGCATCGCGGCGACCTACGG 76031 29 100.0 32 ............................. GGTTCACCGTTTGCCGGTGATTGGGGGTCCAG 76092 29 100.0 32 ............................. CGCGCGTATCAGGTTGCGTGCGAGATCGCAGC 76153 29 100.0 33 ............................. CTGATCGGCGACAAAACGCCGGCGCACTACTTC 76215 29 100.0 32 ............................. TGCAAGATCAACGGCACACTGTCGGTGATGAT 76276 29 100.0 32 ............................. GCCTGCTGCCCTGTTTTTCTTGCGCTCGTCGA 76337 29 100.0 32 ............................. CGCTTCATGGTGCCGGTGGAGAAGCTGCGCCG 76398 29 100.0 32 ............................. GGTCCGCCGATGGCATCGGGTGGCGCACAATC 76459 29 100.0 32 ............................. GCCGCGCTGTACGGCATCTACCCGAAGGAGGC 76520 29 100.0 32 ............................. GCACCTATGAGGAATTCGCCCACGGGCCGGCC 76581 29 100.0 33 ............................. GCCCGGGTCGGCACGAACATGACGAAGGTCTCC 76643 29 100.0 32 ............................. TCGCTGGATGATGGTTCCCTGGCGTTTTTCGA 76704 29 100.0 32 ............................. GGCCGTATCAGATTCCGAACAACCCGGCCTAT 76765 29 100.0 32 ............................. TCGCTCACTTCAGTAGCTCCAGATCCAGGGGC 76826 29 100.0 33 ............................. CACACGCTCGGCGACCTCCTGCGCGATCTCCGC 76888 29 100.0 32 ............................. CGCTGACGGTATTCACCGACAGCGAGGCAGCC 76949 29 100.0 32 ............................. AAGCTGGGCGACGACATCTGCGTCCGGCTGGC 77010 29 100.0 32 ............................. CTGATACCGGTGTTCACCGGCCCTGCGCGCTA 77071 29 100.0 32 ............................. GTGACCGATATATCGTGCCGGCCAACCCCTTC 77132 29 100.0 32 ............................. GTCGATTTTCTGGTGGGCCTGGAGAAGCAGCA 77193 29 100.0 32 ............................. GCGGACGGCGCCGTGGAGTTCCCCGCTGGTAC 77254 29 100.0 32 ............................. CGGGTTGGTGTACCGCTTCAATTAAACAATTG 77315 29 100.0 32 ............................. GTTTGGGACTTGGGCACTTGAAAAACTGATCG 77376 29 96.6 32 ............................T CCTGTTTGCACAAGATTCTGCTAACGAGTGGC 77437 29 100.0 32 ............................. TGGTGGCGGCCTGCTGGGCCTGCTCTACCAGG 77498 29 100.0 32 ............................. CCGCCTGGGTAGGATTTCAGATCCCACCGGTT 77559 29 100.0 32 ............................. CCGACTTGGCTGTATGCCGTCGGCTGCGAGCT 77620 29 100.0 32 ............................. GCGACGATCATGCGCTGGCTGGCATCGAACGA 77681 29 100.0 32 ............................. AACCGGTGGATTGTCAGGATTGTGTCTTTCGG 77742 29 100.0 32 ............................. CCATACCGGCTGGCGTACACCGGCGCCACCAA 77803 29 100.0 32 ............................. CAGATGGTAGAGGCCGCCAGCACCCAGGCCCA 77864 29 100.0 33 ............................. GCGTCCTCGGTCAGTGTGGTGGGCACACCGAGC 77926 29 89.7 0 .......................A..TT. | ========== ====== ====== ====== ============================= ================================= ================== 45 29 99.7 32 GTGTTCCCCACAGGCGTGGGGATGAACCG # Left flank : GCGCAACGATACGGTACGCTGAGGGCCGACAACCAGGCCCTCGGTGTATCACTGTCCGACCTGGATATGATGATCGCGGGGCATGCCTATTCGCTCGGCCTGGTTTTGGTGACGTCGGACAAGGCATTCAGACACATTCGGGGTCTTGAAGTCGAAGATTGGGCCGAAAGGTAAGCTTTATTCATGCCGACCTGGCAAGCCAGGGTGAACCCTGGCATGTCGTACTCCTGATCGCTGCAATCATATAAAAAGCTTGCCTCCATGCGGGTTGTCGAGCATGAGACCCCTTTCCCGCGGATCCATACGATGCCGCCGCCCCTCAACCTGAAAGCGTGATACGCCAGCCCCGGCACCGCTGGAACCGGCTGGTCGCGTATCTACTTGCCCTCCATCAGGAGGCTAGGATGGGGCACTATTGCCCTGTCGGTTTTTTGATCGATTCGGTTGGTGGAAAATTGGAGCCTTAATTTATTCTTTTGAATCAATGGGATACATTTAGA # Right flank : GGCGCGCATGCCAGGAAAGGGCGGTAACCGCCGCCGGGACTAAGCCGGTATGACGCCACAGTCAATTTTTCCCATTGTGATCCGCATCACGGGGCGCTAGATTGTGGCTTTGGCGGCGAGGCTTGGGGCAACGCCGCCAATCGCTCCACATTATGGGCCGAAGAGCCCAGACACAAAAAACCTCACCGTCGGATGGAACGGTTAAAAGAGGCGAAAGGGATTTGTCATGGGGACGCACGCTACTGAGTGGCCTTCCTGTTTTTATTATTGGGGTAAAGCAAGGCCTGTTTCCGACGACGGTGCGGCGTACCACCTGTTACCGTTCCACAGCCTGGACGTGGCGGCCGTTGGCTGGCATTTGCTGGCACCGGAACGCCCTTTGGCCAGGCTGTTAGGGCGTCGTCTCTCTCTTCCTCCGGCTCTATTGCGCCCTTTGTTGGTGTTCTTTCTCGGGTTGCACGATCTGGGAAAGTTCGCTCGTGCTTTCCAGGGGCTGGTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 87405-89021 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXVX02000009.1 Alcanivorax sp. ZXX171 9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 87405 29 100.0 32 ............................. CGCCGCCGGTATAGGCGTAGGCGGTCTGTTCG 87466 29 100.0 32 ............................. TCGCCCTGTAGCTCGATCAGGAGCAGCTGGCG 87527 29 100.0 32 ............................. CGTCAACTGGCATGATCTACCGTGTGCAGCAC 87588 29 100.0 32 ............................. CATCTTGGGCGGGTTGAACTTGTGGGTATGAA 87649 29 100.0 32 ............................. CTGATGGTGTCCTCCGAAAGACCAGCTACCAC 87710 29 100.0 32 ............................. TCGCTCGGCCTTTTTCGTTTCTGTAGAAATAG 87771 29 100.0 32 ............................. AGGAGGGCAAACGACGCGGCCCGCCGCGCCGA 87832 29 100.0 32 ............................. GGGAATGCATCTACGTCCTGTTTGATGGCAGC 87893 29 100.0 32 ............................. CGGGTGATGTGCAGCAGCGTGCCCGGCCCGGC 87954 29 100.0 32 ............................. TCAGTTTCATGTACGAATCAAGCAAAAAGTGC 88015 29 100.0 32 ............................. TACATGGGGACCACCGAAAACTCCATCATCCA 88076 29 100.0 32 ............................. GCTTTCCGTTCACGCGGCGCGAGGGCATCACC 88137 29 100.0 32 ............................. AGGGATTATCGACTATGAACACCATGCAGCCA 88198 29 100.0 32 ............................. CAATGCAGCGCCTGGAATCCGCTGTCGATGCT 88259 29 100.0 32 ............................. TCGCGGCGTTCACGGGAACCTGTATCACCCGG 88320 29 96.6 32 ............................C TGGACGAGCTGCTTCCCTTCGTCCTGGAGCAC 88381 29 100.0 32 ............................. AATCTCGCTCATGACTTGCCCCCCTTGCCGCA 88442 29 100.0 33 ............................. AGGTGCAGAGATGAAACTAACTTACGCCGAAGC 88504 29 100.0 32 ............................. GCCCTTTTGGCATCTTGGCACCAACGGTCCTG 88565 29 100.0 32 ............................. TTCACCAGATCGAAGCGAGCAACCCGCCCGAC 88626 29 100.0 32 ............................. GGCCGGGAGAAAGACCTCCGGGCTTTGAAGAA 88687 29 100.0 32 ............................. TTACCGGTTTGTTTCGGTCGTCTGCTCCTCAA 88748 29 100.0 32 ............................. CTCAACTACAACGACAATCCCTGGTTCCCGGC 88809 29 100.0 33 ............................. CGTCACGGATTACCTTGCCCGCCGCCATCGTCG 88871 29 100.0 32 ............................. CTTCCAGGTGCCGGTTTGCCCGGCCGCGACGC 88932 29 100.0 32 ............................. ATGCTGGTTTCCGCCATCGTCGGCGGCGTGCT 88993 29 89.7 0 ..................A....A..G.. | ========== ====== ====== ====== ============================= ================================= ================== 27 29 99.5 32 GTGTTCCCCACAGGCGTGGGGATGAACCG # Left flank : GCCGCCGGCGGTATTGAGCCACCGCCCCCACCGGAAGACAGCCAGCCACCCGCCATTCCCGAACCGCAATCCCCGGCCGACAGCGGGCACAGGAGCCAGGGATGAGTATGCTGGTGGTGGTGACCGAGAATGTACCGCCGAGATTGCGCGGACGCCTTGCCGTCTGGCTGCTTGAGATACGCGCCGGCGTGTACGTTGGCGACGTCAGCAAACGCCTTCGTGAGATGATTTGGGAACAAGCCCAGGAACTGGTCGAAGACGGCAATGTGGCGTTCTGCTGGGCCACGAATACTGAATCCGGCTTTGACTTCCAGACCTGCGGCCAGAATCGCCGCGTTCCCGTCGATCACGATGGCCTGCGCCTGGTCTCCTTTCTACCCGTCGACGAATCGTCGTCCTCCTGATTTCCCCTCTTTAACAATGCGCATTTTTTGACCGATTTATTCGGTGGATTTTCTGCCCCTGATTTTTTCCTTTTAGATCAGTAGGATACATTTAGA # Right flank : GGCGTCGGGGTGTTTTACCGCCAAGCCGGATCGCGACTGAAGTCGCTCCTACCGCGTTCTAGCGCGCTTTGGCGGCGACGTTTTCGGCGAGGGCGAGGGCGGCGGTGAGGCCGGGGGATTCGATGCCGAGCAGGTTGATCAGGCCGTCCAGGCCGTGATCGCGGTGATCCTGGATCAGGAAGTCCGGGTAGGGTTCGCCGTGCATTCGCAGCTTGGGGCGCACGCCGGCGTAGTCCGGGCGCAGGGCGCCGTCGGGCAGGGCCGGCCAGTAGCGGCGCACCGCCTGCTCGAAGGCCGGCCGGCGCGCCTCGTCGACGTGGTAGTTGGGTGCCGGGATCCATTCCACGTCCGGGCCGAAGCGGGCGCGGCCGGCCAGGTCCAGGGTGAGGTGGACGCCCAGGCCGTGGGCCTCGGGCAGGGGGTAGATCAGCCGTTGGCTGGGCGCCGGGCCGTTGAGGGCGAAGTAGCTGCCCTTGGCGAAGCCCTGGTCCGGGCGCTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACAGGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //