Array 1 190706-191903 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACVEL010000006.1 Taishania pollutisoli strain CZZ-1 CZZ-1_scaffold6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 190706 47 100.0 30 ............................................... GGTTTAACTCTCGCTTCTTGTTCTAAAGAA 190783 47 100.0 30 ............................................... AAGTTTGGAAGGTGTTTTTTCCTCTTCTGT 190860 47 100.0 30 ............................................... GTATCTAACATTTGACTTTATTATGAAAAG 190937 47 100.0 30 ............................................... TTCCGTTTCTGTTTGCTGATAGGGGGAAAA 191014 47 100.0 30 ............................................... AGATTAGAATAACGGCTATAATTATGATTG 191091 47 100.0 30 ............................................... ATCCGCAGGATGAAACCTTTTTTACATTGG 191168 47 100.0 30 ............................................... AAACGACAATTGAATCAGATCACCGAAACG 191245 47 100.0 29 ............................................... ATAAAACCATTTTTGCCCCATCAACACTG 191321 47 100.0 30 ............................................... TCAAGTTCCTTTCTTAATCTTTTCAGTTTA 191398 47 100.0 29 ............................................... TCGGATTCCTGCGTATTTTTTAGTGTAAG 191474 47 100.0 30 ............................................... GAATTTGTACAACTTAGCGAATCGGTGCGA 191551 47 100.0 30 ............................................... AGTTTTGAAAAGATAAAGACAGACAAGTTG 191628 47 100.0 30 ............................................... ATGAGTTTAAAAGTTAAAAAATGCAAGAAT 191705 47 100.0 30 ............................................... TTATGCCGGTGATATTAAACAGTAATTACT 191782 47 100.0 29 ............................................... AAGACAACAGCAAGTCGTTGTCCGTTGAG 191858 45 83.0 0 ........................A......-TGGT....-.....A | G [191901] ========== ====== ====== ====== =============================================== ============================== ================== 16 47 98.9 30 GTTGTAATTCATCCGTAAAAATAAGGAACTTGAAAGCAAATCACAAC # Left flank : CCGGAAAATCCCATATCCGGAGTTTGAATAAAATCGTATGAAATGGATACTTCACGTTTTAATGCATACAGAACTATGTGGGTAATGGTTTTATTTGATTTGCCGACGGAAACGAAAAAAGAGCGGAGAGATGCCTCTCAATTCCGTAAAAAACTATTGGAAAGTGGTTTTATGATGTTCCAGTTTTCTATTTATATGCGTTTTTGTCAAAGTATGGAAAATGCGGAAATGCATACCAAACGGGTCAAAAATATACTTCCTGAAAAGGGAAAAGTCGGTATTTTTGCTATTACCGATAAACAATTTAGCCGAATGGAAATTTTTCATGGCGTAAAAAAACAAGAAACCAATCCACCAGCCCAACAACTGACACTGTTTTGAACAGGAAAACAGAAATGAATAATGAATCATTTTTTTAAGCCAAAAAAGGGAAAAGTCCTGTTTTTTTATTTCTAAAACAGGACTAAATCTCTTGCTATTTCTACGATTCAGCGCAGAAC # Right flank : ACCATCCAACTGATCGGGAAGGATCCTCTTTTGTCAATCGAACCAATTTTATGCATCAACCAACAAGTCTGTAAATCCATGTATCCGTAGCAAAAAGTTATTCCTTCATTTATCGGCAACTTTCCTCACTAACGGTATGCAACAGCATTATTCGTTAAACCAGGTATTTTTGATGGTGTGACGCACCAGGTAGTATTCTTCTTCATACCAATAAAAGAACGCCACGCAATTATTCACACCGTCAATGATCATCTCGTATTCATTCCCCGCATCACTGGTAACCGTCATCGTGTATTTCAGTTCTTCCTCGTTGTAGTCCCATTTTTTGATGTAGTAATCAGATGAAATGGTAGCTGTCGTGTGGCGAAAGGTCGTCAGTTCCTTATTGAATACAAACAGCGTCCCTCCTTCATCTGTCGAATACACGTCCCATTTCTCCCCTTCATTGTCCCAGACAGCATTCTGCCGGAAATTTGTTGAAATATTGAGTTGAGCAATTA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTCATCCGTAAAAATAAGGAACTTGAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.00,-2.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //