Array 1 3680-7051 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSWH01000018.1 Corynebacterium belfantii strain 2937 contig_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3680 29 100.0 32 ............................. AACACCACAATCGCCCAAAACGTTGTCACAAA 3741 29 100.0 32 ............................. CGTCAGCATCACCAGCATCAAACTCTTCCACA 3802 29 100.0 32 ............................. CTGTCTACCGTTGTTGGCTCACCCATAACTAG 3863 29 96.6 32 ............................G TTGACTGCGTGCTCGGCTAAAACTTCATATTG 3924 29 96.6 32 ............................G TCCACCGCTGGTACACCCGCCCCGCCAAGATC 3985 29 96.6 32 ............................G AAATCGTAGACTCGATCGTCACAGAATCAATG 4046 29 100.0 32 ............................. CACTTAGGGCCGTTCTTCGCGGCGGTGTAAAG 4107 29 100.0 32 ............................. TCTCGTGTCGTCGAATATTTCAAGGGCGCGAT 4168 29 100.0 32 ............................. ACCCCCAAGACGGCACGCGTAGTACAAGTTAG 4229 29 96.6 32 ............................G GCGCTCAAAATTCGAGAAAATGACACCCATCC 4290 29 100.0 32 ............................. TCGACTATTTATCTGGTTCGGTGATTGGTGAT 4351 29 100.0 32 ............................. CAGTGGGGTACTGGAATCTCCCCCAGCGAAGG 4412 29 100.0 32 ............................. ACCCCACACCAAAACCAGTCGAACTCATGGAA 4473 29 100.0 32 ............................. CAGCCGCCGAGGTCGTATGGGGAGAGGGTGTC 4534 29 100.0 32 ............................. TCGAATGGCCATCCTGTGAGCCGGAACCCGAA 4595 29 100.0 32 ............................. CGCTTCATCGCTTCTTGCTGGGCTTCCAATTC 4656 29 100.0 32 ............................. GATCTCATTTCTATTGACTTTATCGGAGAGGA 4717 29 96.6 32 ............................G AATTCCTAATCTCCCCACTTGACACATAGGGC 4778 29 96.6 32 ............................G GAGGGGATGAGAATGTTACTACTCAATCTGAA 4839 29 96.6 32 ............................G TTCTTAAGGCTTTCGGGGTGAAAGTTCAAGAA 4900 29 96.6 32 ............................G CAGCCTGTCGAGACACCGCGCCAAGCTTTGAC 4961 29 93.1 32 .............T..............G TATTAATGACTGATCCAGCGTTGAAGGGTGTT 5022 29 96.6 32 ............................G ACACTGGTGACCCCCGTGAAATTGCTCAGTGT 5083 29 100.0 32 ............................. TAGCGCAGGCAACTCCCGTGCCATGCTGGGGA 5144 29 100.0 32 ............................. GGCGGCAAAATTCAATACCCCTGCGGCGGTGG 5205 29 100.0 32 ............................. ACCTCAACAACTACCGCCAATCAACTTTCGAT 5266 29 96.6 32 ............................G CGATGTTCGCGATGACCCTCTTCCGTAACAAC 5327 29 96.6 32 ............................G TAGATTTCCCCCTTTTGTATTCCTAGCCAGTC 5388 29 100.0 32 ............................. CGTCCTAGATCAAGCAAGGGAGCAGCTCGGAT 5449 29 96.6 32 ............................G GCAACCACCATCGCGGTGCTGAATCGTGAGCA 5510 29 96.6 32 ............................G GGAATGGACAAATACACCGCTTTCCAGCTAGG 5571 29 96.6 33 ............................G TAAGGCCTTATCGAGGTCATCGTCCCAAATGAC 5633 29 96.6 32 ............................G TCACAGTGACAAAACAACACCATGTAAAGACA 5694 29 96.6 32 ............................G AAGCTCATTCCCTTCAAGGGAGTACCGAAGGG 5755 29 100.0 32 ............................. TGGCACCGGGCGGCCGACTCTGCAATGAAATA 5816 29 93.1 32 .............T..............G GCGCTTAGCCTCGACCTCGACTTCTTGCAGCG 5877 29 96.6 32 .............T............... CTGCCTGACCTGCCCATTCGACAGTGATAGAT 5938 29 93.1 32 .............T..............G TCAAAATCAGCACTGTCAATCCTCATGTATTG 5999 29 96.6 32 .............T............... ACCAACGACGAAAAACACATCAAGGGAATGGA 6060 29 96.6 32 .............T............... TTACTGGGCGGCCAGTAACTCTGCTGGATCTT 6121 29 96.6 32 .............T............... TTACTGGGCGGCCAGTAACTCTGCTGGATCTT 6182 29 96.6 32 .............T............... TTACTGGGCGGCCAGTAACTCTGCTGGATCTT 6243 29 96.6 32 .............T............... GTGTTGGAAACCATCCGTAAAAATCAAGAAGA 6304 29 96.6 32 .............T............... GCTGGGCCGACAAAAACGCCACGACAATTACA 6365 29 96.6 32 .............T............... TGAACGCGGAATCTTGACTAAGCCTCGTGGAG 6426 29 93.1 32 .............T..............G GTCCACGGCCGCGGCGACGGTATCCGGCAGCG 6487 29 86.2 19 .............T.........C.C..G CCTACACCAAGCAGTAGAA Deletion [6535] 6535 29 96.6 32 .............T............... CGTCACTCATTGAACGCGATGACTGCTATGTG 6596 29 96.6 32 .............T............... AGTCGATCACATGCCTACACCAAGCAGTCGAA 6657 29 93.1 32 .............T..............G GTCTGGCCCGAGATCCCAGCATGGGAGGGTGG 6718 29 93.1 32 .............T..............G ATCAGCCTGCGTGCTCGCCAAAGCGAATGAGC 6779 29 93.1 32 .............T..............G AGGTCTGATTCGAGGTTTCCTACGGTGACTCC 6840 29 96.6 32 .............T............... CGTCACTCATTGAACGCGATGACTGCTATGTG 6901 29 93.1 32 .............T..............G ATCAGCCTGCGTGCTCGCCAAAGCGAATGAGC 6962 29 93.1 32 .............T..............G AGGTCTGATTCGAGGTTTCCTACGGTGACTCC 7023 29 96.6 0 .............T............... | ========== ====== ====== ====== ============================= ================================= ================== 56 29 96.9 32 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCAAATGACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGTTTTTCGACGAAAGAGGAGAGGCTCGTTTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCATAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATGTAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAAGCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTAGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCAGCTCAAGACTATGCTGTGATGCGGCTTTTGCTGGGTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : GTTTTCCCCGCACTAGCGGGGATGAGCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //