Array 1 161-1385 **** Predicted by CRISPRDetect 2.4 *** >NZ_SCIF01000013.1 Latilactobacillus sakei strain L15 NODE_13_length_75302_cov_20.667389, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 161 36 100.0 30 .................................... ATTTAGAGGGAGGATTTACAATGAGCAAAG 227 36 100.0 30 .................................... AACGTCTGGGCTTATCGTGTTTGGATTGAC 293 36 100.0 30 .................................... CTGCTGTTGTAGCAAGCATGGTGGTTCTAT 359 36 100.0 30 .................................... TTTAGAGAGAAGTATTCTATCAATAACCAA 425 36 100.0 30 .................................... ATATCTGCTTTAATATTATTGACTTTTCTG 491 36 100.0 30 .................................... AATTATCGAAAATTTATTACAAAAAGCAGA 557 36 100.0 30 .................................... ACGCTATATTTATTTCTTTTAATTGCCATT 623 36 100.0 30 .................................... TCACGCGTTCGTTGGGACTCGTGGCGGGCT 689 36 100.0 31 .................................... CTTGCGATAATCATTTCGTAATTGCCTGTTG 756 36 100.0 30 .................................... AATGGCCACAGAATTTTCTGCTTCGCTATT 822 36 100.0 30 .................................... GGCTTAAACGTGTTATGGATAAGCGTATAG 888 36 100.0 30 .................................... ATTAACAGAGTAATTCTAATAGGACGATTA 954 36 100.0 30 .................................... ATGTGCCATTTAAATCACTCCTATTTTCTG 1020 36 100.0 30 .................................... ATGGCTTTGATTCTGGTTCTGTCGGTTGAA 1086 36 100.0 30 .................................... CTGAAGCTGGCATCGAATTCGACCCCAACG 1152 36 100.0 30 .................................... ATCCCACAAGCAGCGAAATCTCTAATGCTT 1218 36 100.0 30 .................................... CACGTCCATGATGAGGTGATCGCGGAGCAG 1284 36 100.0 30 .................................... TAGAATCACGCGGCTTTCTTCAATTTTGGG 1350 36 91.7 0 ..........................A......G.T | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 99.6 30 GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Left flank : TTCAAACAACTTTTTCCAATTTTGAGGACTTGGTAATCCGAACCTCAAATTACATCAGTTGGTTTAATTCCGACAGAATTAGAACGAGTGTTTAGAAAAAGATGTGCCATTTATTGACATAGGAGCAAACTTAAGGCGCAAGGGCTAGAGATACAAGGCAG # Right flank : TCACAATAATTATCGTAAATTCTTTTAATTTAAGTTTGGAGAGTACCTTTAAAGGGGTACTCTTTTTTATTAGTTTTAATGTATATCCTTGATTGATATTTCACGATTCGACTATTGAAAAGCGTTCTCATTTAGCTTAGAATTAAGTCAGCAACAACGTGCTATAATGCGATTTTTGGAGGGTCAGTAATGTCTAAATTAGAAATTATCGATTTACACGTCGGAATTGACGGTAAAGAAATTTTAAAAGGTGTTAACTTAGAAATGAATACGGGTGAGATTCACGCCATCATGGGACCAAATGGGACCGGGAAATCAACCCTTTCAGAAACCATCATGGGGAATCCTAAATATGAAGTGCTTCAAGGTGAAATTAAATTAGACGGTCAAAATATTCTTGAAATGCCAGTTGATGAACGAGCACGCGCTGGCTTATTCTTAGCGATGCAATATCCATCTGAAATTCAAGGTGTTACAAACGCTGAATTTATGCGAGCTGC # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGAGTATCAAATCAATGAGTAGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //