Array 1 121486-122036 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLWA01000010.1 Pseudomonas cichorii strain LMG 2162 sequence10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================================================================================================================= ================== 121486 28 100.0 32 ............................ CAGGTCGAAGCCAAACAGCAAGCAGAACGCAT 121546 28 100.0 32 ............................ CACAGCATGCCGTGGCGCTGGCCGCGCTGGTG 121606 28 100.0 32 ............................ TGACGGAATGCCAAGGCCAGCAACTGGAACGC 121666 28 100.0 32 ............................ AAGGATGAAGCCATAGAGCGCTGAATGCGCAA 121726 28 100.0 32 ............................ AAGGATGAAGCCATAGAGCGCTGAATGCGCAA 121786 28 100.0 32 ............................ GACAAAGGTGTTCATCAAAGCCGACAAGGGTC 121846 27 82.1 135 ..........-.........TGA....G ACACTCTGCTCGATAACTCTCCGTATTCAAAGAAAAATATGCGTTTGAGGCCGTTTTACCCCTTTTTTCATCACGCTTTGTAAGTGATTGATTTTTAAAGGATGAACCCAATGTGAAAAAAAGAGGGTCCAGAAA C [121861] 122009 28 85.7 0 ......G....C.C....C......... | ========== ====== ====== ====== ============================ ======================================================================================================================================= ================== 8 28 96.0 47 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : AGTCAAGGTGGTTAGAGCATCAACCGCTTAAATGATGGGTTTGAGGGTAGTCGAGAGTGGGAGTGTTTGCCGCTGAGATATCTGGGTGAGTACGGGCGGATTTATCCGCGAGACGTCACTGAAGACAATGAATTTCATGTGATGAAAGGTTCATCCCGCAGACCCAACCCCGTGGGAGGGTCCTTGGCCGCGACAGCTTTCACACAAAATATGTCCGGAAATGGAGCTTTCCAGGCTGTCATGTCGCAATTTCCGTTTTTTAGCGACACGTTATTGGGTCATGTCGTTGGCGACGACCTATCAAAAAGCACGGCGCTGTCGCAGCATATGAATATCTGGCCACGGCAGACAGGAATGAACCCTTTTCTGACCCTCTTTTTTTCACCATAGGTTCGTCCTTTAAAAATCAAAGACTTACAAAACTTGATAAAAAAAGGGGTAAAACGGCTGCAAGCGCATATTTTTCTTTGAAAACGGAGGGTTATCGAGGAGAGTGTCTA # Right flank : AATCGACTCAGGCAGGCATCGATGGAAACCGCGACCAGTCGCCAGCAAGCTGTCTCCCACGGTGCTCTGACCTTAACGCATACAGAGCCAATTCATTCGCGAAAGGTGTTTGAATACGGCTTTCCCGGATGAATCCGGTCCTGCATATGTTTGAAGGCCACCCTGCACAAACCTTCTAGACTTCCCGTCTCCCATACGCGATAACACTCAACCCGACCCCAAACCCTGTAAGCCCACCATGACTCAGAGCAACTGGATCAATCTTGCTCAGGACCGCGACACCGGTATCGAGACGTTGCATGCCCATTTCCAGGGGAATGCTCATGTCTACGATCCGCATTGGCATGACAGTTATCTGGTGGGTGTCACGGAGCAAGGGGTGCAGCAGTTTCATTGTCGGCGGCAGCGTTATGCCTGTACGCCGGGGCAGGTGTTCATGCTGGAGCCGGGGGAGATTCATGATGGGGATGCGCCAAGCGCAGACGGTTTTACGTACCGGA # Questionable array : NO Score: 4.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-1.44, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //