Array 1 497-1561 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCQV01000085.1 Leekyejoonella antrihumi strain C5-26 contig85, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 497 29 100.0 32 ............................. AAGCCGTCCCTCTGCCCGGATTGTGCCATCGC 558 29 100.0 32 ............................. TGGCCAGCGATGGGGACGGTATGACAACCCTG 619 29 100.0 32 ............................. AGGCCGTAGGCGTCGATACCGTACAGGCCATA 680 29 100.0 32 ............................. ACCGGGCGAGTTCCTCGCAGATTGGTGCGTGC 741 29 100.0 32 ............................. TTTGGCGGCGGTGTTGCGCCGGATGCCGTATG 802 29 100.0 32 ............................. GAAGAACGCAACCCGTTGGGTGTGGCTGACGT 863 29 100.0 32 ............................. GAAGCCGAGCTCCTCCAGCACGTCCTTGTCGA 924 29 100.0 32 ............................. GAAGACCTATGTGCACACCTTCCCTTCCGGCT 985 29 100.0 32 ............................. TTCGTGGTGCACAACTCCGGAGGAGAGACCTA 1046 29 100.0 32 ............................. AACACGCAGACCTACTCTTTCACGGGTTCGGC 1107 29 100.0 32 ............................. TGGTTCGCCGACCAGATCGAGGAGCAGACCCG 1168 29 100.0 32 ............................. TGCGGGAGTGGATTACCCTTCGCCGTTGTTCG 1229 29 96.6 31 ........G.................... CCCTGGACGGTGCGGAACGCGTGCCCGGCCC 1289 29 100.0 32 ............................. AGCACCCACCCCCACGAGATCGGGCGGACCAT 1350 29 100.0 32 ............................. TCGCAGTACGTGCGCGTCGAACTGTCCCAAGA 1411 29 100.0 32 ............................. CCTGGAGCCGTAACCATGACCCTGAACCTGCC 1472 29 100.0 32 ............................. GCCGAGGGCGGTCAGGGCGACGGGCAGAAAGT 1533 29 93.1 0 ..A.G........................ | ========== ====== ====== ====== ============================= ================================ ================== 18 29 99.4 32 GCGATCCCCGCGCGAGCGGGGGTGATTCC # Left flank : GCCACCGGACAAGGTACTCGCATTCCTCGAGAGCCTGTAACTATGCCGAGGACACCGACCGCGACAACGCGTGATTGCACCGGCAAAACCTCAAGCCTCGGCATAGTCGCGGTGTCGGCATAGATCGACCTATGGCGATATCGCCATAGGTCGATGAGGTCGGCTACCTGCCCTTCGAGCAGGACGCGGCGAACTTGTTCTTCCAACTCGTGTCCAGCCGCTACGAACACGCCTCGCTGATCCTCACCTCGAACCTGCCCTTCAGCGGCTGGGGCGGTGTCTTCGGCGACCAGGCCGTCGCCGCAGCGATGATCGACCGCGTCGTTCACCACGCCGATGTCCTCACCCTCAAGGGCGCCAGCTACCGGCTCCGCAACCGCGGGATCGACACACTGCCCAGCATCAAAACCCAAGACACGGCAGACTAGAAGGCACGAACCGGTGGCCTCATTTTCGAGCGTCGGATCGGCCTCATTTTCGAGCGTTGCCGACACGCG # Right flank : CCGGAAGGCCTCCATCTTCTGGACCGGCTTCGGGCTGCTCACCGTCGGCAATAACACAACCCTCACCCCCCCCCAGCACACCCAAGACCTGATCTCTCCTACGCCCGCGTCGCCCCCTAGTATCCCAAGATCGCTACTCCAACCAAGGATTCGCCATGACCACCACCGCTTCCCCCTCTGCGGGCCGCCCGCGGGCGCGCGACCTCGGCATACCGTTCGAGGGCATACCGGGCCCACTAAACGCGATCACCGATGTATCTGGCGTTGAGGTAGGAACCGTCACGCTCATTGACGGTGATGGACCACGGCCCCCGCCATGGACCCGTTCCAGGTCATGGCCGATGACCATGTCCAAGTCACCGCCGTCCTGGTCCCCCACGGGCCGGTATTCCCCTCCTTCGCGTTCCGCTTCGACACCGACCACGGGTCGATCACGTTCTCCGGTGACACCACCAGATCCAACAACCTGATCCGGCTCGCCCGCGGGACAGACATTCTGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGATCCCCGCGCGAGCGGGGGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 4984-1600 **** Predicted by CRISPRDetect 2.4 *** >NZ_VCQV01000056.1 Leekyejoonella antrihumi strain C5-26 contig56, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4983 29 100.0 32 ............................. GTACTACTACCGGGTCAGTGCTGTGATCAACC 4922 29 100.0 32 ............................. TTCATACAGGCCGGTCACGGGAATTGTGAGTG 4861 29 100.0 32 ............................. CCATCCGGTCATCACGAGATAATCGAAGTGTT 4800 29 100.0 32 ............................. GATGAGGTAAAGGGTTCAGGGGTGTGATGTGG 4739 29 100.0 32 ............................. TGCACGTTGGCGGTGCGTGCACCGAAGTACGT 4678 29 100.0 32 ............................. ATTTACGGACGGCCGGTCCAGTCATGACCACC 4617 29 100.0 32 ............................. TTGTAACTCATGCTTCCTCCGTGGTGGAACAA 4556 29 100.0 32 ............................. TATATTCTTTTTATCCCGCAACCTGGAGTGAG 4495 29 100.0 32 ............................. TGCTGACCCAGCACCCATAGAGGCCTCCGATC 4434 29 100.0 32 ............................. GTCCCGGATGGATTCACCCGGGTTCAGGGTGA 4373 29 100.0 32 ............................. ACATTCACGGTCCCGGTGATCGATGCCTCATC 4312 29 100.0 32 ............................. CTCACACCCACTTCCGCTAGCGGAAGCGGGTC 4251 29 100.0 32 ............................. ACGCTGCCGCTGGCGCCCTTGAGCATCAGGTC 4190 29 100.0 32 ............................. CCGTCACGGAACGCTTTCCGTTGCGCGTCAGG 4129 29 100.0 32 ............................. GTCGAGCAACCGTTCCCGTATAGCGTGCAGGT 4068 29 100.0 32 ............................. GTGGTAACGCACGACCTTCACCGGGCCGTGGC 4007 29 100.0 32 ............................. GTAATAGGCGGCCGCGTCACCCGAACTGAACA 3946 29 100.0 32 ............................. CCGCGAAGTCCACTGGGAACGAGACGGAGACA 3885 29 100.0 32 ............................. GCCCATGCCGCCCTCACGTGCGCGGCCGTGTC 3824 29 100.0 32 ............................. GTGTACGCGCTGGCGTTGCTGCCCTTGTTGAT 3763 29 100.0 32 ............................. GTGTTCGCTGGCCAGTACTTCACCGAATGGGA 3702 29 100.0 32 ............................. AGGGCGCCCCCGGACAGGTCCGGTATCGCCGG 3641 29 100.0 32 ............................. TCACCGCGCGGTGGGGTGTACGGCGTCTCCCC 3580 29 100.0 32 ............................. CGGGTCCGGGCCGCGCTCGGCGAGATCGAAGA 3519 29 100.0 32 ............................. ACCATGCCCAAGCGGCACATTCTGCCCGTTGT 3458 29 100.0 32 ............................. TACTCCCGGGCTCTATCCATGCCCGCGATGGT 3397 29 100.0 32 ............................. ATGCAGGCGTTTTCGAAAGCGAATGTGGATTC 3336 29 100.0 32 ............................. TTCTCGGCGGACGTGTGCGGGATTGATCTTTT 3275 29 100.0 32 ............................. GGCCACAACGTCCTCTACCTCGACTTCGAAGA 3214 29 100.0 32 ............................. CTCGCCCGCGATTGGGTCGTCCCTGGAATCGT 3153 29 100.0 32 ............................. ACCGTCGAGCGCCGAGACCCCGATGAGTAGGA 3092 29 100.0 32 ............................. ATCTTGCACCTGCCACTGATACGTGGTCCCGT 3031 29 100.0 32 ............................. TTGCAGGAGTGGCCGGGTCTGTTCCTCGATCT 2970 29 100.0 32 ............................. TTCCAGCCGCTCACCGTGTCGGGCTTGACGCC 2909 29 100.0 32 ............................. ATCCTGTGGTCTCCGCCTCCGAGTGCGCCGCC 2848 29 100.0 32 ............................. TTGGCCACTCGGCTCGGCTGGGATGATGAGGG 2787 29 100.0 32 ............................. GCAATGGTCGCCGGGAGGATCACCAGCGGACG 2726 29 100.0 32 ............................. CTGACCCGCAAGCCCACCATCCACTGGCTGAG 2665 29 100.0 32 ............................. GACCCGTACGGGTACTGGCCGTTGGACGAATC 2604 29 100.0 32 ............................. CTACCAGCGCAAGGATGGCCGGTGGGTCTACG 2543 29 100.0 32 ............................. GCGTGGCTAGGTGCGCGTGAGCAGTTCATCCA 2482 29 100.0 32 ............................. ATGCATGATGTGCTCGCCGGTCCCGGGCAGGA 2421 29 100.0 32 ............................. GCGGAACGCGCCAGCGGAGCGGGTCTTCTTGA 2360 29 100.0 32 ............................. GGCAAGAAGAAGATCAGCATCATGACTGCCGC 2299 29 100.0 32 ............................. TGATCCCCGCACGCTCAGCCAACTCCCGTTGA 2238 29 100.0 32 ............................. GGTCACGTCGTGGATGTACGCCCCGTCCGAGG 2177 29 100.0 32 ............................. AAGCTCGTGATTATCCAGTCGGACCTGGTCTT 2116 29 100.0 32 ............................. TCGTACGTGGTGCCGAGCCGGTAGTTGATCCC 2055 29 100.0 32 ............................. AATCGGCGAAGCCAGCGACGCCAGGTTGTAGT 1994 29 100.0 32 ............................. GCTCGCGCCAGTGCCCGTGAGGGCCGAAGGCA 1933 29 96.6 32 .....................A....... CGTGATGGAAGTGTAAGAGCCCGACACTCGCT 1872 29 100.0 32 ............................. ATCACGGGTGAATCCGTCGACGCCGCCGACGA 1811 29 100.0 32 ............................. TTCGCCATGCGCCGCACCTCGTCCGGGTCGCG 1750 29 100.0 32 ............................. GTCACGGACCTCGATGCCGGTGACGTCGTGAA 1689 29 100.0 32 ............................. TCGCAGCGGGGCTCGTGAGTAGCCGGGCATCC 1628 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 56 29 99.9 32 GCGATCCCCGCGCGAGCGGGGGTGATTCC # Left flank : ACCGACATCGATGAGGTACTCGGCCTGCCCGTCACCCACGACCCCGACGAGTGGGATATCGACAGCCTTCGACTATGGGGACCACGAGGTGAAGTCGAGGGCAACTGGTCCCACGCCGAATGGACCAGCTGATGACCCTGACCGTCATCGTCACCGAACGCCTCAGCCCAGGCCTGCGCGGAGTGATCTCCAAATGGCTGATCGAGGTCAACCCCGGAACCTACATCGGATCCCTGTCCGCGCGCGTCCGAACCGAGCTCTGGGAGGAAGTGTCAAACTGGGTCATCAGCAACGACCTGGGCTACGCCCTGCTGATCCACCCCGACAACACCGAACAGGGATACACCATGCAGTCCTGGGGAACAAGTACCTACCAGATCACCGACCACCACGGGCTCACACTCATCAACAGGCAGCACGAACCAAGCCCAATCAGGCCAGAATCCGATCACATCGACCCTGGATGGTGATAGCCACCCCAAAATACCAGGCCACGCAGA # Right flank : CAACTCCTTGAAACGAGAGAACCATGAAACGCGCGTGTCGACGACGCTTGAAAATGAGGCCATAACGACGGGCGAAAACGAGGCCACCCAGACAGATTGGATGGGTGATCTCAGTGGAGGATTGGGCTTTGATCCGGCGGATGGTTGCGGACGGTGTTCCGCGGCGCCAAGTCGCTCGGGATCTGGGTATCGGTAGGTCGACGGTCGAGCGGGCGTTGGCATCGGACCTGCCGCCGAAGTACGAGCGGGCGGCGGTGCCTTCGTCGTTCGCACCGTTCGAGCCGTTGGTGCGGCAACTCTTGATCGCGACGCCGGATATGCCGGCGACAGTGATCGCGGAGCGGGTCGGCTGGACAGGATCGATCAGCTGGTTCCGCGAGCACGTGCGGCGGTTGCGTCCGCAGCATTGGCCGGTCGACCCCTCGGACCGGTTGACGTGGCTGGCGGGTGATGCGGCGCAGTGCGACTTGTGGTTCCCGCCGAAGAAGATCCCCCTGGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGATCCCCGCGCGAGCGGGGGTGATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //