Array 1 1599757-1599039 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049366.1 Companilactobacillus pabuli strain NFFJ11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================================== ================== 1599756 36 100.0 30 .................................... GGCAATCCTATCATAGTAAAATATTTAATT 1599690 36 100.0 30 .................................... TAAATAAACAAGCGAATTGCTATGAAATCA 1599624 36 100.0 30 .................................... AGTTTCACACCAATAATTAAGAGGTATCGA 1599558 36 100.0 31 .................................... AAAAAATTGCGTGAGTATGGCCTCATTGAAA 1599491 36 100.0 30 .................................... CCTACGTTTAGTTTTAAGATACGCAAAATT 1599425 36 100.0 30 .................................... GTGTATCAATTCCGAATACGATCAAGTATG 1599359 36 100.0 30 .................................... CCATGTTTTTGATTTTACCGGACTCATACC 1599293 36 100.0 30 .................................... CCATGTTTTTGATTTTACCGGACTCATACC 1599227 36 97.2 30 ............................T....... CTTGCACCCCGTTCAAATTTTTGAGTCAGT 1599161 36 97.2 51 .............................A...... CAAGGAAACTGGCGAAGTGTTGGTAGATAAGTTTTTGTACCTTAAAGGATC 1599074 36 91.7 0 ................A....A.............T | ========== ====== ====== ====== ==================================== =================================================== ================== 11 36 98.7 32 GTTTTTGTACCTTAAAGAATTTAAAAACAGTAAAAC # Left flank : AGTTTCGATTGGAGAATACGGGGCTGCCAGTTTGGTTGATACTTTATAATCTAGATAGTTTTATTAGTTCTAAAGACATTGAGTCACTTTTAATTGAAGTTAAAAAGTTAGTAAGAGAATACGATCTAAAGTTAATTTATTTGGGAAATGATTTGAATAATGTACCGCTTGATGCTAGTGAAATGGATAATGTTGTAATATCTACCAATGAATTTCATCAGTTGTTACCAATTGACGAACTAATAAAGTCGATTCAGTTATATTATCCAAATGATTTGCAGTTATCAAAAGATGAAATTGCACATTCTTTAAAGAGAATTTTTTCTTTGATTGGAAGTACTGAAAAAGTTTTTATATCTAATCAAGATTTGGTATTATTAAAGGTAATGAATGAGATTTTAGGATATGAGACGTCATATGATTTAAGAACTCAATCGTTAACAGATGCAGAAGCCAAATTTTTGGAAGATTAATTGACGGATTAAAATTTTGAATTTGAG # Right flank : CAAAAGGCTCTTTGTCAAATCGTATTGATGAATGATTTTGAGCTCATTGAGCATCCTCATCGAGGATGCTCTTTTTCTATGCACAAATCAGTCTTATTCTTTTAATAAAGTGTTCAAGATTTCTAAAGCCATAAGAATTTCTTTTTAGTTTCTTTATCTTTCCAATGGTGCCCTCTAGAGGACCATTGGAATATGGCAATAAGCAACTATTTTTCACATAATTTATGTTTTTTCGTAACGTTGTAATGGCTGTATCCATTGCAGTCCCATTTCTTTTATATCCAGAAGTAGTTTCTTGAAGTAGATTTATGTCATGATATCTTATTGATCTTTGAATACTCTGATAAGTACCATAAGCTTCCTTGAAAATTGGTATTTCATCAGTAGCTATATCGATGACATTTTGAATAGTCGTAAATTCATTTATGCCGACAATAAATTTTATATGAGTATCGTCTACATCTTCCTCTGGAAGATGATATAGACGCCAATCAGATTTC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACCTTAAAGAATTTAAAAACAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 2 2300698-2299871 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP049366.1 Companilactobacillus pabuli strain NFFJ11 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 2300697 35 100.0 31 ................................... TAAGAATCTTAGCCACAACAAAGATGAGAGT 2300631 35 100.0 31 ................................... TCCATTAGGAGTAATTGTCCACCGTATCCAA 2300565 35 100.0 31 ................................... TAATTCTCTAAATTCTGTCACATCCGACATC 2300499 35 100.0 31 ................................... TAATGTCGAAACTAAAGTCGATGAGACTAAC 2300433 35 100.0 31 ................................... CAGAATCTCATGCGTTTGTTGGTGATTTGAA 2300367 35 100.0 31 ................................... CCGTTAAGCATTCTCGAAGTAACTCAGCTAA 2300301 35 100.0 31 ................................... CCTAGTATCGAAGAGCCAAAACAAAACGAGC 2300235 35 100.0 31 ................................... CGTCTGCATTATAGTTTGTTTCCACGTGTGG 2300169 35 100.0 31 ................................... CCGTTAAGCATTCTCGAAGTAACTCAGCTAA 2300103 35 100.0 31 ................................... CTAAAAAACTCTTGATCCTTGCCAAAATGAT 2300037 35 100.0 31 ................................... CTAGCACAAATGAGAACTGCAGATGATAATA 2299971 35 100.0 31 ................................... CATGAGATAATCGTAAAAAATCGAGATCGTG 2299905 35 88.6 0 .............A...........TT.C...... | ========== ====== ====== ====== =================================== =============================== ================== 13 35 99.1 31 GTTTTAGAAGTATGTCTTTCTATTTACTTAAGAAC # Left flank : TTTTATTGGTGATCTTGGTTCATTCAATCTCAATGCAAGTAGTCAAATGAAAATTATTTTAAAAAAGATAATCGAAGACTCACAAATAATGCTTAACGAAATTGAAAAAGTTAATACCGATTTAAATAGTGTCGTTTTTGATTCCATTACTAGGTATTCGTTGCCTCTAACCCTTGATATGTTTGCCAACTTTTAAAGTCAAAAGACATCAAGATAGATTTTAGTAACTGGACCAATTACTGTGATAAACTTATGGATGTAATCAGTTTCTATTCTGATTTCACTAATAAAAAATTGCTTATTTTTAACAACATTGGTCGACTATTGAACGTTAATCAGTTAAATGAGATACATACTTATCTAAAATCCGTTGATTTAAAGCTAGTTTCTTTAGAATCTTACCCTATGATTTTTAAGGAGAAAAAATTAAATGCTAAAGTCTATTCAATCGATAATGATCACGTTAGATTTGATTATTAGAAATTGATTAGAAAATAACG # Right flank : TTGCTATACTGTTCCTCGTTAAAAGATTCAAATCAATAAACCATTTTTAGTATACTTACAAGTATGCCATCTCAATTACTTGTTTTAGAAGTGAATCATCTCAAATAAAAAGCTCTAGTACAGAATCCCAAAAGATTCCAATACTAGAGCTTTTCATTTTTTTATCCTAAACTCTTCATAACATAATCACCCAAAGTCCGAACACGTTTCAAATCATCTTCATATGGATCTTGATCAATCTTCACGGAGTCAGCAACTTGTTCGCCATTACTGGAGTTCAGTTGCATTGTAAAATAATCTACGGCACGACCAAAGTGAATGTGTCCTTTGGAACTTGATCCTAACACCGCAAACTTAGTTCTTTTTAAATCAACATCTTCCAAGTCTTCATAAAAATCCTGGGCTTCTTCTGGTACTTCACCATCATTGTAAGTATAAGTATCGACAATCACAGCATCATAATTAGAAATTTCATACGCATCAGTGTCGATCATTTGTTC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTATGTCTTTCTATTTACTTAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //