Array 1 53027-54734 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTH010000012.1 Pseudomonas aeruginosa strain 2021EL-00148 NODE_12_length_236202_cov_45.897105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 53027 28 100.0 32 ............................ CCCTCAAGTCGAAGCGCTCCATCGAGCAGAAC 53087 28 100.0 32 ............................ ACCAATGGACCAGCAATCGAACTCAAGAACGA 53147 28 100.0 32 ............................ TGGCGGCATACCGTCGAGGACTGAAGCCTGAC 53207 28 100.0 32 ............................ TTATCCATCGCTGCGCGCCCTCCTCGGCTCGT 53267 28 100.0 32 ............................ ATGTCGCGTCGTCGATGTGCTTTGTGGGCATC 53327 28 100.0 32 ............................ GGTGTCCCGGGCACCCTGCTGGACCTGTTCAC 53387 28 100.0 32 ............................ TGGCCCGAACCCGCCTGCGCCTACAACGCGAT 53447 28 100.0 32 ............................ CCACCATGTCGGCGGTGATCGTCACCGGCACC 53507 28 100.0 32 ............................ AACTGGTCGTGGCGCGGGATCACCGACCGACG 53567 28 100.0 32 ............................ AGATCACCGAGCGCTATTCGGAGCCGGCCGAA 53627 28 100.0 32 ............................ TCTTCGCGTCCCTGGCCTTGGCTCGATACAGA 53687 28 100.0 32 ............................ ACCGAATCCGCGACTCGTACCGAGTCGCAAAC 53747 28 100.0 32 ............................ GGGTGGCGGAACCGACTGCCGAATATCACTCC 53807 28 100.0 32 ............................ CTCTCCTGAGCGCTGAGGATGCAAGAGCCCGC 53867 28 100.0 32 ............................ TTCCGCCAGTTGCCGAAGCGCCCGAAATAGAG 53927 28 100.0 32 ............................ TGAACAACCCGGCGCTGCGCGACTATCTGCCG 53987 28 100.0 32 ............................ GGCAAGCCATTGATCAGCAGGCCGGTATTCGG 54047 28 100.0 32 ............................ TATGCCGCCCAGCGTGCCGCCCAGGGCGCCGC 54107 28 100.0 32 ............................ ACGAACAGCGCTGCGAACTCGCCAAGGTCTGG 54167 28 100.0 32 ............................ TATCGAAGAGTGATCTGCGCTGCTGTGGCGCA 54227 28 100.0 32 ............................ ATGGTGCTGTGGGAGCGTGGCAGCGAGTCGCT 54287 28 100.0 32 ............................ ATAGAGGATCAGATAGCGCCCGACATGCCCGG 54347 28 100.0 32 ............................ TCGTAATCATTGAAGCCCCGGGCAAGCTGAAA 54407 28 100.0 32 ............................ ATGGGGTCTACATCAGCGATGCGGCTCTGTCC 54467 28 100.0 32 ............................ ACTTGCAGAAGCCCCAGGACTTGAAGCCACTG 54527 28 96.4 32 C........................... ATCCGTCACCGGAATTTGCGCGTTGGCCGTGC 54587 28 100.0 32 ............................ TTACCTTTAAAAGGCTTTAAAAGGCCTTTTAG 54647 28 92.9 32 .....................A..A... TGTCTCGAAGTTCATAAGCGGGCTTCGGGCGA 54707 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================ ================== 29 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAGAGGGTTAGAGATCGCTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAACTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGGAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGGCGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 63757-63249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLTH010000012.1 Pseudomonas aeruginosa strain 2021EL-00148 NODE_12_length_236202_cov_45.897105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 63756 28 100.0 32 ............................ ACGTCGAGAAAGTGCCGCCCTTCCTGTACGAA 63696 28 100.0 32 ............................ CTGACGATCTGGCCGACCGGCTGAAGTCTGCC 63636 28 100.0 32 ............................ AGCGCCTGGACAATGCGCAGCCCAGGCGCTGG 63576 28 100.0 32 ............................ AGCATGGGAAACCCGTCAAGGCCCGGATACTG 63516 28 100.0 32 ............................ TGAAGGCGTATCTCAAACACACCGAGTTTCAG 63456 28 100.0 32 ............................ CGTCCAGAACGTCACACGCTCGCCGTCGATGT 63396 28 100.0 32 ............................ GCGACCCTGGCCAGGGCGGCGTCGCGCTCTGC 63336 28 100.0 32 ............................ TTGAGCACAACCGGCTGAGCCAGCTGGTTGTC 63276 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTCTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACTTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTGGTAGGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //