Array 1 77800-75521 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPE01000018.1 Delftia lacustris strain LMG 24775, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 77799 32 100.0 33 ................................ CTCATCCATGATTGAGCCTTTGAGCTCATCACC 77734 32 100.0 33 ................................ TTTTCCAGCGCATCGTCGCGCTCGTACCGCACA 77669 32 100.0 35 ................................ TTCGGTCGGCTCCCGACACGAACACCCCTCTTGAT 77602 32 100.0 35 ................................ AGGCTCGGGCTGCTGCTGGGCCAACTGCTGCACCT 77535 32 100.0 35 ................................ ATGACCGATCCCGTCGGTCAGTGGCTCTGCGCCAG 77468 32 100.0 36 ................................ GCGCACGGTCGGGATTTCCTCGGCCGCCGCTTCGAG 77400 32 100.0 33 ................................ ATAGACCGTGGCGAAGGGCAGGTTCGCGACGCG 77335 32 100.0 34 ................................ CCAATGTGCCTGGTTTGTCGCTGCCGTGTCGTTG 77269 32 100.0 33 ................................ GAGGCGGCCATGGCCAGGTAGGCCACCTGCCAG 77204 32 100.0 35 ................................ ATCCACACGGACCAGGCGCAGGTGCAGGTGACGGC 77137 32 100.0 33 ................................ TTCGCAGATGCATCGGACTGGCACCGCCTGATC 77072 32 100.0 35 ................................ ATCCACACGGACCAGGCGCAGGTGCAGGTGACGGC 77005 32 100.0 33 ................................ TTCGCAGATGCATCGGACTGGCACCGCCTGATC 76940 32 100.0 33 ................................ AAGGTCAGGCCGTTGTCTATTCGGAACTGTCGC 76875 32 100.0 34 ................................ CACTTCTACGCCTGGTGGCAGGAACCCAACTACC 76809 32 100.0 35 ................................ TCCGTCTGGTCGGAAAACCGCTGCTGCCGCCTGGA 76742 32 96.9 34 ....T........................... CGGCCCAAGCAGGCGCGCGAGGCCATCAACGAAT 76676 32 100.0 35 ................................ TTGAGGGGAGACTGCGGCGGCAGCAGCAGCCTCCG 76609 32 100.0 34 ................................ ACGCTCACGGGCGAGAACACCCTGCTGGACCTGC 76543 32 100.0 36 ................................ TCGGTCCATTACACCGGCGCCGAGGCTACGGCCACG 76475 32 100.0 35 ................................ TCCAAAGACAAGGGCCTGCGGCCTCTGCTGTCGTA 76408 32 100.0 33 ................................ ATCCTCGCGTGCTTGAGCCTGATCAGCGCCTCT 76343 32 100.0 34 ................................ TCGGTGCGATCAGGGACCATGGCGCGCACCCCAT 76277 32 100.0 35 ................................ AGGTCTGATCGCTCACAGCTGCAGAGGCAAACGGC 76210 32 100.0 34 ................................ CACCTGCACCACTACATGGAGACCAGCCGCGAGG 76144 32 100.0 33 ................................ GCCAAGGCCTGGACGGCCGCCGGTCTGGATCTG 76079 32 100.0 34 ................................ TGGGCGAGTGAGCGCGCACGCATGCGCAGCTCGC 76013 32 100.0 33 ................................ CCGCACGCGAGGAAGCGTGCAGGGCTGTCACGG 75948 32 100.0 34 ................................ TTGAAGCCGCTGATATGGGTCTCGGGTATGCCCA 75882 32 100.0 36 ................................ CTCTTGATTCTCGGCCCGGTCTGCTTCCGGGTTGTC 75814 32 100.0 33 ................................ AATCTGCGCCAGCAAGACGACGAGCTCGAAGCG 75749 32 100.0 35 ................................ CACCACGGGCATTTCGGCTGCCTCCGATTCCTCCT 75682 32 100.0 33 ................................ AGCGATGGTGCGCGCCAGGGAGTAGGGCGCTTT 75617 32 100.0 33 ................................ CTGGGCCAGATGATCGAAGTCCTGGAGGGCGAA 75552 32 96.9 0 ..............................G. | ========== ====== ====== ====== ================================ ==================================== ================== 35 32 99.8 34 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : GGGCGTGAACTACGTGACCGGCGACTACTCGCGCGGCGTCAGCGGCTTCTGGGTGGAAAACGGCGAAATCGCCTTCCCCGTGCATGAGATCACCATCGCAGGCAACCTCAAGGACATGCTCAAGGGCATCGAGGCCGTGGGCGCGGATGCCTACAACTACGGCGCCAAGACCGTGGGCTCTATCCTGATCAACCGCATGAAGGTGGCTGGTAGCTGATCGGCTTGCGGCTGCGCATGCTGATGAAGAGCGGCTGAAAGGCCGCTTTTTTGTGGGCACCCAGTCACCGCGCGCCCCGGCTGCAGTTGGCCGCACCAGCTCGCGTCCCGCGAACCCCAAGTGACCTTTGTCCTCCCCTGAGGTTCGCATTTCTGCAAGCCGTTGTTTTTGTTGAGGCATCACTGCGTCTTTCGTGGTCCTTGCCGTTTTTCCGTGACAGAGCGCGCAGGTTCGCGATGGCGAAGCTTTTTTTGCAGTGGTACGGCTGGGTTATAAGCATGCC # Right flank : ATGGCCATCAAGCGCGAAATGACGGGTTCTGGCAATGGCTGGCAGCCCGATGCCTGCATGTCGGCAAGGCGCTGTCCTACTGGATGTGCAGGGTTTGGGAAGGCGACGCAACTGATTCAAATTGTCAAATTTGTTCCCGGATGTGTTTCTTCCGTGCCAGCAGTCTGGCCGGTTTGCGTAGGTGGTTCGAGGGAGAGCGACGTGGGTTTTCTGAGGCGTATGAAGTTGGGAACCATGCTGGGCATGGGTTTCCTTGCGGTGATCGTGGTCTGCGTGTGCGTGGCCGGCTTCGGCTGGATGAAGCTGCACGATCAGGGGGAGCAGTTGCGTGTTTTGGCCGAGGACCGCATGGGCAATCTGGCCCGGCTGCAATCGCTCAAGGACAACGCCAATGTGTCGGCGCGGGTGGTGCGCAATCTGGCGCTGATCACCGATCCGGCGCAGATGGCCGAGGAGAGCCGCCGGCTGGATGAGGTGGTTGCCAGGAACGGCCTGGTCAT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 100721-99492 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPE01000018.1 Delftia lacustris strain LMG 24775, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 100720 32 100.0 35 ................................ AAATCGGCCCATCGGCATAGCAGCAGGGCACCCCG 100653 32 100.0 35 ................................ AACGACAAGATTTTTTGGCTGCATGCGACGGTTTG 100586 32 100.0 34 ................................ GCTGCATCGGCCTGTACGTCATCTGCAGGGTCTA 100520 32 100.0 35 ................................ TTGTATCCATCAGGAGTGCCATCCATCAAGTAATC 100453 32 100.0 33 ................................ CAACTCGGCACCGAGGATCGCCCTCGAATCACG 100388 32 100.0 34 ................................ ATGTCGAATCCCCCGAGGAAGTGGCAGCCCATGT 100322 32 100.0 33 ................................ TCTGCGTCCAGGCGGCGCAGGACAACGGCTGCC 100257 32 100.0 36 ................................ TTCGGCAAGGGCTCCGGCTATCGCAGGGCTCAGATG 100189 32 100.0 34 ................................ CAGACCGTCTACGTGCACACGTTTGACCGGAACG 100123 32 100.0 36 ................................ GTGAGGGTCTGACCATGGATAACGCTGCACGCGAAG 100055 32 100.0 33 ................................ TCCTGTGGCTTGTTGACTACAGATTGCAGTCAT 99990 32 100.0 34 ................................ TCCAATTGATAGCAACGGAACACGACAGCCTCAC 99924 32 100.0 35 ................................ CCCGCCGAGGGCAAGGACGGTCGCATCTACCTCGA 99857 32 100.0 33 ................................ GCCAGATAGCGAGCGATGAAGCGGTAGAGGGCT 99792 32 100.0 34 ................................ AGACGACGATGAATTCATGGGTGTCGCTGCCGTG 99726 32 100.0 35 ................................ ACGCCCAAGGGCGTCCAGTGGATCGCTGGCGAGTG 99659 32 100.0 36 ................................ GATAAGGAGGCCTGTGCCTTCGGGCTGGAGCGCCTG 99591 32 96.9 36 ............A................... CGCGCCAGCCAGGGCATCACCAAGGCCCTGACGCTC 99523 32 90.6 0 ..........T....AC............... | ========== ====== ====== ====== ================================ ==================================== ================== 19 32 99.3 35 GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Left flank : CCGGCGATGAGAAATGAGGTGTGCCGATGATGGTCCTGGTGAGCTATGACGTCCGTACCCAGGACCCGGATGGTGCCCGCCGCCTGCGGCGCATCGCCAAGGCCTGCCGGGACTTCGGCCAGCGCGCGCAATACTCCGTCTTCGAAATAGAAGTGGACGCCGCGCAATGGGTCGCCCTCAAGGCGCGGCTGATGCAAATCATCGACCCCGCCCAGGACAGTCTCAGGTTCTACTACCTGGGCCAACACTGGCGCAGCAAGGTCGAACACATCGGCGCAAAGCCCGTGCTGGACCTCGACGCCCCCCTCGTCTTCTGAACCTCCGCGCGAACCCCAAGTGACCGCCACCTGCCCTTGAGGTTCGCGGCCGCGCAAGCTGTTGTTTTCAAAAGGGGGTGTGCGAGGGATTGGCTGAACGCCGATCCCGCAGCATGACAGTGCCGCTTGGTTCGCGGAAGCCTGGCTTTTTTCATAGCGGTGAAATTGCTCTATAAGTACCCC # Right flank : CCCTGCCACCACAGCAAGCGCCACATGCATTTGAAACGAATCGCCTGACTCACTCCTCGCCGCGCAGACCGCCATTGAGAGAGAGTCCAGCCACTGCCTGCAGCAGGTACCCGCGTGCCTCATCCAGCGAGGGACCCGCATGCCCATCGATCCGCCGGATATAGGGAGATGTGAGCACAGCCATGGCATGGCCATCGGGCCCGAGGATGGGGCAGGAGATGTCCACCACACCATAGGACTGCAGGCTTTCGCTCTGCCTGTAGCCCGTGCTGCGTATCTGTTCCAGCATGTCGTGCAGTTGTGCCTCGGGCAGTGGCACCTCGCCTTCCAAAGGCGTGTGCTCAGCCAGCATCTGCGCGCGGCGTTCGCGTGTCTGGCAGGCCAGCAGCACATGGCCTGACCCGGTGTCCAGCAGCCCGACGCGTGCGCCCAGCCTGATTGACAGGCCCCAGTTCCCGGGGCCGGGGACCTGGGCCACGATCAGGACATTGCCACGGTCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGTGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGTGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 198061-194069 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNPE01000001.1 Delftia lacustris strain LMG 24775, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 198060 28 100.0 32 ............................ ATCGCGCTGGCCTCGGTGTTGTTCGGGCCGAC 198000 28 100.0 32 ............................ TTTCAAAAGGCATTTCAGCATATGGCGGAAGA 197940 28 100.0 32 ............................ AATATGCCCAGGAACTTCAAGGCCGACTTTGG 197880 28 100.0 32 ............................ AAGGCCCGAGTCAAAGCATGGGAAGCATGCTC 197820 28 100.0 32 ............................ ACCCGTGGCCGGGAAGATGACACCGGCCAGGC 197760 28 100.0 32 ............................ GCCGCGAAGGCTGGAGCGTATTCGAGCATCGA 197700 28 100.0 32 ............................ TGGCGGACACAGCGACCTCGCTCATGGGCGAG 197640 28 100.0 32 ............................ TGGCGGACACAGCGACCTCGCTCATGGGCGAG 197580 28 100.0 33 ............................ GCGGGTGCTGGCTGGCACCGCAACCGACCGTGC 197519 28 100.0 32 ............................ TGTACAGCTTCGAGGAAACGATGCAGTGCATC 197459 28 100.0 32 ............................ AGCACAAGAGTCGGCGCGCAAGTTGTTCGGCG 197399 28 100.0 32 ............................ ACTCCAAATGCTTGGAAATCCAGACCCATTTA 197339 28 100.0 32 ............................ GCATTCGTCAGGCACGCTGAGTGCGATCTTTG 197279 28 100.0 32 ............................ TCTCGTTCCAGTAGTAGTTCAGGAGACTCGCC 197219 28 100.0 32 ............................ CAACAGAGACCACCATGGCCCTGACCATCAAG 197159 28 100.0 32 ............................ GATGGAGGCCCGGTCAAGGTTCAGCAGATTCG 197099 28 100.0 32 ............................ AGCGCCTTGGCTTCTTCGGATCGAGCGATGGC 197039 28 100.0 32 ............................ TTTAAGCGCAGCCCAGAAGCCCAGGAAGGCAG 196979 28 100.0 32 ............................ TGTTGCGTGCTGACCAGTTCGGCGCTGGTCTG 196919 28 100.0 32 ............................ AATGCCTTCACTGTATCGATAGCGACGCCCCG 196859 28 100.0 32 ............................ GTCGAGAGGAAGCCACTGCCCTCCTCCTCGCC 196799 28 100.0 32 ............................ AAGCGTGGCCAGGCTTTGGAGAGTGTGTCCAT 196739 28 100.0 32 ............................ GAGTGCGCTTCGTTTTTTCAACCACCACGGAG 196679 28 100.0 32 ............................ GATGTGGAAGTAGACGAACGGACGTCTGCCTA 196619 28 100.0 32 ............................ AGCAGAAGAATTTGCGCTTTCATTTGCTTCCC 196559 28 100.0 32 ............................ TGTCTCAGGCGCGAGACGCCGCACGCGACAAG 196499 28 100.0 32 ............................ CATCCCGCGCCATGCGGAACACGTCCATCTTG 196439 28 100.0 32 ............................ ATGCGTCCACCTCGGTCTGCCAGCTCTTGGAG 196379 28 100.0 32 ............................ AAGCCTCGGCCCAGCAACAGCGCCCCTGAGTT 196319 28 100.0 32 ............................ TCAAGGGGCGTGCGTGTTGCGGCGGCGGGTGT 196259 28 100.0 33 ............................ ATTCAATCACTCTCAGTGTGGGGCGCGTTTCGG 196198 28 100.0 32 ............................ TGTCGCGCATCCCTCCATAGGGCGACGTGAAC 196138 28 100.0 32 ............................ AGTCGCCGTTCGGGAAGCGCGCTACGGTCCAG 196078 28 100.0 32 ............................ ATGCGCGAGTGGAAGGCAGATGGCATGGAAAA 196018 28 100.0 32 ............................ ATGCTGGGAGAGCGGGAAAAACGTGTGGTGGA 195958 28 100.0 32 ............................ CCACAAATCCGAAACACACTGTCCACCAGCGC 195898 28 100.0 32 ............................ ATCAATGTCGGCTTGGGCACGGGCGACAAGTC 195838 28 100.0 32 ............................ GACATGGTGCGCGCGGGGAAGGGGACTCAGGC 195778 28 100.0 32 ............................ AGCGAGCCGCTCCTTGTCCCCTCTATTCACAA 195718 28 100.0 32 ............................ TCGGCCAGCTCCAGGGCCAGCCATCCCGAGCG 195658 28 100.0 33 ............................ CAACGGGATCAACCCCGACCACGAATCTGCCCC 195597 28 100.0 32 ............................ TAAGCCAGTTGTCTGGCGGAAGGGGCTCCTAA 195537 28 100.0 32 ............................ TGCCCGTGCCGGCGTACAAGCTCGGCGGCCAG 195477 28 100.0 32 ............................ GTTGCGGCGCCTTCGGTTTTTCAACACAGGAG 195417 28 96.4 32 ....T....................... TGTGATTGCCACCAGATCCGCGGCTTCGGCAT 195357 28 100.0 33 ............................ CAGGTGGTGCACGGCAGTTTCGTGGGCGCTGCC 195296 28 100.0 32 ............................ ATCAGATCACCCTGAACAGCGTGTCGGCCCGG 195236 28 100.0 32 ............................ GGCTGCGCTGATGCCGGCGCACAGGAGCCCAC 195176 28 100.0 32 ............................ TATCTGGCTGCGTCTGGGCCAGGCTATGACAA 195116 28 100.0 32 ............................ TTCAATCACTCTCAGTGTGGGGCGCGTTTCGG 195056 28 100.0 32 ............................ AGCGACTCGGGCGTGAACTTGGTCGGGTCGAT 194996 28 100.0 32 ............................ TTGGAGCCTTCAGGGCCGGTACAACGGATCAT 194936 28 100.0 32 ............................ AGTCCGCTGGCGGCTCGGCGCCGTGGAAGGTG 194876 28 100.0 32 ............................ TGCACATCAACCCGGGCCGCGAAGTCAGCAAC 194816 28 100.0 32 ............................ TGTCGGGACGGCCGAGCAGCGCATTCGTGCGC 194756 28 100.0 32 ............................ TTGCGCACGGCCACGCCGAAGAAGTCCTCGCA 194696 28 100.0 32 ............................ CAGCGCCTCGCGGAGCCGGGGGGTGTCCACCT 194636 28 100.0 32 ............................ TTCGTCAGCAGTGCTGTGATTGCTTCCTGTGC 194576 28 100.0 32 ............................ TTGGAGCAGACAAATGATGTGGCTCGACGCAC 194516 28 100.0 32 ............................ CAGTCAATCTCTAGAGCGGATGCCAGCCAGCA 194456 28 100.0 32 ............................ ATGACATACCGCAACCGTGACCTCATCCGTGA 194396 28 96.4 32 ............G............... TGGGCCGTGTAGTGCGTAGGCATTTGGTCCGT 194336 28 96.4 32 ............G............... ATCCCAGGTGCGGCCATCGAGCTGGCGGCCCG 194276 28 96.4 32 ............G............... AAGCAAATGCAAGGTGTAGGCCGGTTTTCTTT 194216 28 92.9 32 ............G.........T..... AATGGCGCGGAGAATCAGCAGGCCATCAGCTG 194156 28 96.4 32 ............G............... TCCCCAAAGATTACCGATCTGGCCTGCGAGTT 194096 28 96.4 0 ........A................... | ========== ====== ====== ====== ============================ ================================= ================== 67 28 99.6 32 GTTCGCTGCCGCATAGGCAGCTCAGAAA # Left flank : CGCGCTGCGCGGCCTGATGGAACAGCCCTGGCTGCAGGGCATGCGCGATCACGTGCACTGCACGCCGCCAGCTTTGGTACCAGAGGGCGCCGTGCCCTACCTGGTGCAACGCCGGCAATTCAAGACCAGCCCCGACCGCCTGCGCCGCCGCCGCATGCGGCGCAAGGGAGAAACCGCTGAACAGGCTGCGGCCGCCATTCCCGACAGCGTGGAGCGCACCCCGGACCTGCCCTACGTTCAACTGCGCAGCGCCAGCACCGGCCAGCCGTTTTGCCTGTTTGTGGAGCAGAAAGCGGTGCAGGGCACGGCGGGCCAGGAAGGCTTCAACACCTACGGACTGAGCCTGGGAACTGCTGTTCCCTGGTTCTAACCCTTTTTCTGGCGGCCTGTGGGGTCGCCTTTCAAATCAACAACTTGGCGACGCCTCGGAATTTTGGGGTGTTTTCGGTTTAGGGGGGAAAGTTCTTTAAAAATCAATGAATTGGGAGGATTTTTGTCTA # Right flank : GCACGCACCCCCCTCTCTTGGCTAGCCAGAGGCAGATGCGCGACTACGCGGTGCCCAATGCGATCCGGTTAAAGGCCGTGACGGCAATGAGCGAACAGACCGGCGCTCTCACGGAGCCTGCTGGTGCCACGCGGCAGCAGGGCGCCGCGCCTAATTCACCCGGCTTTCCTCCACGTGCTCCACGAAGGAGGGCGCTTCATTGAAAAGTTGCACGAGCTGCGCCAGGCGCAGGCCATAGGCGCATTGGGGCCGGCTGAACGCCTGGTCGGCCAGGACGATGGCGGCGCGGGCGAGGAACCAGGCGTTGTCAAACTTCCATGCCGCGTCGAAGTGGGTGAGCTTCATCTGCCGGATGTGGTTCAGGGCCAGTTCCGTGGCCATGTCCACGTCGGCGTCTTCGTCAACCCAGTCCATGTCTGCGCAGCGCTGGTCGATCAGGGCGGCCAGCTCGGTTTCTGCGCGGTCTATGGACAGGGCAATCATCTGCTGCATGCTGGGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //