Array 1 322134-326541 **** Predicted by CRISPRDetect 2.4 *** >NZ_VFJI01000002.1 Tannerella forsythia strain ATCC 43037 scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 322134 30 100.0 39 .............................. TCTTTTAAAGTATCTAAAAACTTATAATTAAAATTTGCA 322203 30 100.0 35 .............................. CCCATTCCTGCATACGTTCTTCTACGTATGATTTT 322268 30 100.0 36 .............................. TGATAATAAACTCTACACAAGAAAGAATAAAATAAA 322334 30 100.0 35 .............................. CCCATTCCTGCATACGTTCTTCTACGTATGATTTT 322399 30 100.0 38 .............................. ACTTCTGTCATATAAAACGAGAAAATTCTATAATCAGA 322467 30 100.0 36 .............................. TATTCGTAAATAGCAGCCCTAAGACGACCTTCCAAC 322533 30 100.0 35 .............................. CTGTTAAAACACAGAAAGGATAAAAGTAACGTGTA 322598 30 100.0 37 .............................. GTTGTACGTCCTGTATTTCCGAGAAAACCAATAATTT 322665 30 100.0 38 .............................. CTTTTATCGCACCATTCTTAAACGAGCCTCCTTCAAAC 322733 30 100.0 35 .............................. ATGAGTTTATTGAAACCTTTCTCGAAGAGGAGGGT 322798 30 100.0 37 .............................. TTAAAAAATGAGCCTTGCGCACTTCCCCGAAGGCGCG 322865 30 100.0 36 .............................. CAATTCGTCTACGCATAGTAAAGCATAGTCTGATTG 322931 30 100.0 38 .............................. GCCACCACCGCCCTTGCGTGGGCGGTTTGGTGTGCGCA 322999 30 100.0 34 .............................. GGGCGTAGGGATTTATACGTCCCTGGAATATTAT 323063 30 100.0 36 .............................. CATTTTTCGCGAAGCATGCTGTTTACTGTATTTATA 323129 30 100.0 37 .............................. TAAGGGGCAGGCTTCACCCCCGTGAAGGGTTCGGATG 323196 30 100.0 38 .............................. GGACGTAAGGATTTATACGTCCCTGGAGTGTTAGTACG 323264 30 100.0 35 .............................. TCCTTCAAGGGGCATGGAGGTGAGCGCAACGGAAG 323329 30 100.0 36 .............................. CAGTTTTTTTTGCGCTGTTGTCTCGCACATACGCGT 323395 30 100.0 34 .............................. TCACCATGGGTATATCTAATTAATTGTCTCGCTG 323459 30 100.0 40 .............................. CCTCGGCATCCGCGTACTCTTTACGGTTTGTGATGTCGCA 323529 30 100.0 35 .............................. AATATATTTCCGCTTGAATGCCATATGACACGGAT 323594 30 100.0 36 .............................. ATATTTTTTTAAAAAAAACATGCACGGGAAAAACTA 323660 30 100.0 36 .............................. ACGACAGGGGAGGGAGATACGAGACGGAGGACTATA 323726 30 100.0 36 .............................. ACATTAGAATGCAACAAGGAATTAATGAAAAGAAGC 323792 30 100.0 38 .............................. GAAATTGAATTGATTCATTTTGAGCTTTCCTTTTTGAA 323860 30 100.0 37 .............................. TGCACAGGGGAGGGAAAATGAAACAAACTAAAAAAGC 323927 30 100.0 38 .............................. TCTAAACCGTACCATCGTGGCTGTCCACCGCGGTGGAC 323995 30 100.0 37 .............................. ATTCGGACGTTTCAGACACGCGGGCTACACCCGCGCT 324062 30 100.0 35 .............................. GCTTGATCGGTTTTTCGGTATGGGGGGGCTGCATT 324127 30 100.0 34 .............................. CCACGAAAGCGGTTTTATACTTTTCCATATCCGG 324191 30 100.0 36 .............................. CAAAAAAAGGGGGAACGCTTTCGCGAACCCCCTGAA 324257 30 100.0 36 .............................. CTCTCAGTTCGACGGTTCGGCCAGCGACGGGGGAGG 324323 30 100.0 34 .............................. GCTAAAAAAGCGCGCTGCTGCTTTTGAATCGGAC 324387 30 100.0 36 .............................. CATCTTTATGTAGTGTTCGAGGGTGGGAGTCATTGC 324453 30 100.0 38 .............................. TTCGTGAAAGTTGTTGCATGGTTACGCAGTTTTTTACG 324521 30 100.0 35 .............................. GCGTTGGCGGTGCAAGTGTTAACGTACGCCAACCG 324586 30 100.0 37 .............................. GAACGTGGTGCGGAATACGGGTATTTCCCCATACGGG 324653 30 100.0 34 .............................. CCACCTGCCCCGCGTTGGGGCTTTGTTGTGCGCA 324717 30 100.0 36 .............................. TCTCTCGTGTAATTGTAACACACTACGGAATCATAC 324783 30 100.0 35 .............................. TCCGGACGAGGAGGACGATGACAACGAACCCGACC 324848 30 100.0 37 .............................. ACCCGAACCTTTTCCCAGAACCTCGCCAGTTAGAGCA 324915 30 100.0 37 .............................. TCATGTGCGACAGAATAAGGCCGAGCTTCTGATGATT 324982 30 100.0 38 .............................. TGTTCTCGAATTGGTATTTATCAACAAACAAATTCAAC 325050 30 100.0 35 .............................. ATCTTTATAGAAAAGATGTTATGCTCCGACAAACA 325115 30 100.0 36 .............................. TTACGGGTATAGACCACCATTCTATTATTAACGCAA 325181 30 100.0 37 .............................. ATTTTCTACATCCTTTACGCCTGAGCACACCAAAAAC 325248 30 100.0 35 .............................. CATAAACGGCCGCGAGGTTGCCTTTGTTCTGCTTT 325313 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 325380 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 325447 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 325513 30 100.0 36 .............................. TCCCACCCCTCCGGCCCGGTCGTTTTTTCTGTATGG 325579 30 100.0 36 .............................. TGCGGATGTTGATGATATCCCAGTTTCCGAGCGGTT 325645 30 100.0 39 .............................. GTGGGCGCAGTGATCACGGCTATCTCCGTCGCACTGCAG 325714 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 325781 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 325848 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 325914 30 100.0 36 .............................. TCCCACCCCTCCGGCCCGGTCGTTTTTTCTGTATGG 325980 30 100.0 36 .............................. TGCGGATGTTGATGATATCCCAGTTTCCGAGCGGTT 326046 30 100.0 39 .............................. GTGGGCGCAGTGATCACGGCTATCTCCGTCGCACTGCAG 326115 30 100.0 37 .............................. CACCCAATCTACGAGAATGTTTGCGACCGATTGGCAC 326182 30 100.0 37 .............................. TGTATTTGCCGCTGCGCCGTCCCCCTTGTTATTCCGA 326249 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 326315 30 100.0 36 .............................. GCGATTGCGGCTACAGTCGCAGGAAGGGTAAGGACA 326381 30 100.0 35 .............................. TCGCGAAACGTACAAGTATAGCACGTCCGTGTACG 326446 30 100.0 36 .............................. CGTTGTAGAAATCGTCTTCGTTGATAACAAGTGTTA 326512 30 93.3 0 .........T...................T | ========== ====== ====== ====== ============================== ======================================== ================== 67 30 99.9 36 CTTTTAATCGGACTATCATAGAATTGAAAC # Left flank : TAAACCGTTTAAAATGTACTGGTAATGTATGTGATTCTGGTCTATGACTGCGGCGAGAAACGGGTTGGGAAAATGCTCAAGCTCTGTCGGAAATATCTGAATTGGATACAAAATTCGGTTTTTGAAGGCGAAATTACAGAAGTTAAATTAAAAGAGTTAACTTTGAAGGCTGAGAAAATAATGAACAGCGATGAAGACTCTCTGATTGTTTTTTCAAGTCGACAAGAAAAATGGTTGGATAAGCAAATCTTTGGTAAAGAGCGGAGTAGTATCGATAACTTCTTGTAATAAGTTGTCGGTGAGTATGAATTTCCATAATAGAAATCGAGGCATCGCTATTATGCGTTCTTTGACACATTGAAAATCAAAAGATAAAATTAGTTGTCGAAGTGCGGGGTTTTTCTTACCTTTGTGCTTCGACAACTTTGTTTGTTAATTTGTTGATATAATTGAAGGATAGATTATTGAGAATCAGTAATGTTTTTTGTCGTTTCGAACGG # Right flank : TTGTCGTTTCAACTACTGAATGCAACTTTATGTTTCAAATTTAAGAAAAAGATTTCTTCTGGAGAATAGAAATTGAGTTTGTATTTTGGTCTTTCGTTGATTCTGTATTGCATCTGTTTGGTTATATTGTTACTAAATTCATTGCAATTTGATTTTTTAGGGATGTACTGCCTGATCAGTTTGTTTGTATTCTCAATCAATCCTTTTTCCCATGAAGAATAGGGATGAGTGAAATATATCTGTGTATGTAACTTCTTGGCTAATGATTAATGATCTGCAAACTCGCTACCATTATTTACGGTGATGGAGTGTATATGCTCTTTTTGTATGGCAGCAGTATATCGTAAACGATTTTTGAATGCTCTTTTGCATTTTTCCCTTTGGGCAGTTTTTGCATCATGCAAAAAAACATAGTTCTTTCCACTAAGGTCAGGATATCCCCTTTGCCGTTTTTTCCGACAATAGTGTCCATCTCCCAATTTCCAAAGCGTTGTTTGAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGGACTATCATAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //