Array 1 26963-25674 **** Predicted by CRISPRDetect 2.4 *** >NZ_APTC01000112.1 Neisseria meningitidis NM604 gnm604.contig.111, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26962 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 26896 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 26830 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 26764 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 26698 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 26632 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 26566 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 26500 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 26434 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 26368 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 26302 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 26236 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 26170 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 26104 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 26038 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 25973 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 25907 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 25841 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 25775 36 100.0 30 .................................... TTATGCCGTTTTCATCCGGCTTGAACATTT 25709 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 100.0 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : AAATAGAAATACATACGCCGAGTTCTT # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA //