Array 1 1987268-1986638 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519071.1 Pseudomonas aeruginosa BWHPSA015 adggh-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1987267 28 100.0 32 ............................ CTGCTGGACCTGTTCACCCGCGACCAATACAT 1987207 28 100.0 32 ............................ TTCAGGTCCCGCTGGCTGTTGGCGACGGCCCG 1987147 28 100.0 33 ............................ CAGCAGAAGCCGCTATGGGTGCCGACCCACGCC 1987086 28 100.0 32 ............................ ACGGGCGGGCCGTCGGTGCCGATGCTGACCGT 1987026 28 100.0 32 ............................ ATGTCGATCTGCTGCTTGCGACGCTCCCGCAT 1986966 28 100.0 33 ............................ ATGACCCTGCCGCCTACCGGGCCTCGTTCGTGG 1986905 28 100.0 32 ............................ TGTGGCTAGAGAGTCCGATGGGGGGGCGCTAT 1986845 28 100.0 32 ............................ CTGTCCTGCGATGGCTCCATCTCGATTGCGCC 1986785 28 100.0 32 ............................ TACGGGCAGTCACGGCGAAAGGCACTCAGCGA 1986725 28 100.0 32 ............................ TGCGCCCTAAATCAGTGATCCGGCGAATTTGG 1986665 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 11 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGCCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1067354-1066525 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519072.1 Pseudomonas aeruginosa BWHPSA015 adggh-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 1067353 30 100.0 36 .............................. TCGACCGGCGAGATGTCGCGCGACACCCTCGGCTGT 1067287 30 100.0 36 .............................. TCGACCGGCGAGATGTCGCGCGACACCCTCGGCTGT 1067221 30 100.0 38 .............................. TCTTTGCGGACATAGTTGTAGGCGCCGGCGAGTGCGGT 1067153 30 100.0 36 .............................. GCCGAGATCGAACCCTTCCCGTCCGCCGTACTGGGT 1067087 30 100.0 39 .............................. ATCGTGAGCCGAAGCATGGAGCCATCGGCGAGATACCGT 1067018 30 100.0 35 .............................. AGCAACTATCGCAAGGCCCTGCCGCTGCAAGACGT 1066953 30 100.0 36 .............................. CGCTAATCCCGCGTCGCACTCGCCGCCACGATGGGT 1066887 30 100.0 36 .............................. GGGGCAGCCCCCACCACCTGGCAGAAGATCGCCAGT 1066821 30 96.7 37 .................T............ TCGCGCAGGGAGCGCTCGATGAACGAACGCACATCGT 1066754 30 100.0 37 .............................. ACGAACACGGTTATCACCGGCGACGGTAACAGCGTGT 1066687 30 96.7 38 ...............T.............. AGCCCCGGCCAGGTCGTAATGACCGCAGCCGGTGAGGT 1066619 30 90.0 35 ...........T................CA ACTGCCGTTGTCGCGTGACGGCTATCAGGGAATGT 1066554 30 83.3 0 .......TA.G............G.....G | ========== ====== ====== ====== ============================== ======================================= ================== 13 30 97.4 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CCCCGCACGGGCGCGTGGATTGAAACCTGATCAATGACCTCCTCGGTGGCCGCACACTCCGTCGCGCCCCGCACGGGCGCGTGGATTGAAACAACGCCTTTATCGCCGCGAACAACGCTCCGACCTCGTCGCGCCCCGCACGGGCGCGTGGATTGAAACACTGCGACTCTAGAGTTGCGTGAACGACCTATTCTTGTCGCGCCCCGCACGGGCGCGTGGATTGAAACCTTCGGGAGAAGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACCCTCGGCTGT # Right flank : ATGGATTTTTGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTTCTTCCCGGCTCAGAGCCTGGCCAGGAACTCTTGTGTCACAGTGTCGCGGCCCCAAGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGACTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCGAGGAGCGGTGAAGCCCCTCGGGGTGTGGTCCAACTGGTGCAGGGGAGCGTGGTGGTTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCTCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATTGCGTAGCGCGACAGCCGCTTCCGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACAGTTGGTCCT # Questionable array : NO Score: 9.13 # Score Detail : 1:0, 2:3, 3:3, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1068056-1067627 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI519072.1 Pseudomonas aeruginosa BWHPSA015 adggh-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1068055 30 100.0 36 .............................. TGCAACTCAGGTAAGAAATGTTGCAAGAGCATTGGT 1067989 30 100.0 36 .............................. GGTTGATGGCGATATGGCTAAGGTACGCGCTCTTGT 1067923 30 100.0 36 .............................. AGCGCTATGCAGTAGGAGCCCAGACAGTCGGGATGT 1067857 30 100.0 36 .............................. CTGATCAATGACCTCCTCGGTGGCCGCACACTCCGT 1067791 30 100.0 37 .............................. AACGCCTTTATCGCCGCGAACAACGCTCCGACCTCGT 1067724 30 100.0 38 .............................. ACTGCGACTCTAGAGTTGCGTGAACGACCTATTCTTGT 1067656 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 7 30 100.0 37 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGTCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTAGATAGCGCGCAGTGGACACTCCTTAAGCATCGTCTGTGCGACCTAATCAATCCGGAACAAGACAGCCTACGTTTCTACTACTTGGGCACGAACTGGCAACATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTAAATGGCCCGCTGATTCTTTAGCGTCGGCGCGAACCTAAAGCGACCGACCCAACCCTGAGGGGTTCGCAGCTCTCTAGCTGATTGATTTATCTACTCTTTTTTTGACGTTAGCAGTTTGATGGCGCGCGCCTTGCCTAAATAAGGCATGTTTCGCTGAAGTAAAAGGTTTTTTTCATGCTGATCAGTAAGTTATAAGTGGGCGGT # Right flank : CTTCGGGAGAAGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACCCTCGGCTGTCGCGCCCCGCACGGGCGCGTGGATTGAAACTCGACCGGCGAGATGTCGCGCGACACCCTCGGCTGTCGCGCCCCGCACGGGCGCGTGGATTGAAACTCGACCGGCGAGATGTCGCGCGACACCCTCGGCTGTCGCGCCCCGCACGGGCGCGTGGATTGAAACTCTTTGCGGACATAGTTGTAGGCGCCGGCGAGTGCGGTCGCGCCCCGCACGGGCGCGTGGATTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [8.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //