Array 1 17480-16963 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NNTS01000055.1 Escherichia coli strain MOD1-EC6658 MOD1-EC6658_55_length_19773_cov_32.3332, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     17479	    29	 100.0	    32	.............................	GCTTCTGGCGCGGCGCGCGCGGTGGCGAACGC	
     17418	    29	 100.0	    32	.............................	TTTTCAAAAATATAATCATCGATAGCATCCTC	
     17357	    29	 100.0	    32	.............................	CGGATCGTGTGTGTGCCAGCGATGCGCCCAGG	
     17296	    29	 100.0	    32	.............................	GTGCGCCAGCTATAAAAAACTCACCATCAACA	
     17235	    29	 100.0	    32	.............................	CTGGTGAGCGTTAATGCCGCAAGCACATTAAA	
     17174	    29	 100.0	    32	.............................	CGTCCGAACGCGTAGCCGGTGCTGTTCCGCCA	
     17113	    29	 100.0	    32	.............................	GTAACTAGCGAAAACGTGGTTAATATCCACGG	
     17052	    29	 100.0	    32	.............................	GGAGCAAACCATGGAAGACGCCAAAAAATCCA	
     16991	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
         9	    29	  99.6	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  CCATTTAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAATTTGTCTTTGTTTTGAGACTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTTAT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.65   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//