Array 1 110665-109171 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEW01000004.1 Salinivibrio sp. IB868 scaffold4.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 110664 29 100.0 32 ............................. GCAAGGCGCTGCATTGGATTTGATGATAGCGA 110603 29 100.0 32 ............................. CTTATGCCCTAAATTAGGTATTGTCAACAATT 110542 29 100.0 32 ............................. AGACGTCCTGCGCCTGTAATTGCTGCTCTGTC 110481 29 100.0 32 ............................. CGTCACAACATCCAATATGGGCGAGTTGGTGA 110420 29 100.0 32 ............................. CTGGAAGCGCTGGAGTCTGAAATCACCATTTC 110359 29 100.0 32 ............................. GGCGTGCCTTGGTTGACTGATATGGTTAACCC 110298 29 100.0 32 ............................. TTTGGCAAGGAGGTTAGCGGCTCGGTCGTGGT 110237 29 100.0 32 ............................. GAAATTGAGGGTGGAGTGACGATTAATGACGA 110176 29 100.0 32 ............................. AGACCCCTATTGAGTTTGTCTAGTAGGGCTCG 110115 29 100.0 32 ............................. CCAACTGAGTTCACGTCTGTTCAGCCTGAAAA 110054 29 100.0 32 ............................. CAATGAAGCTGGATTGAAATATTACGAGGTCA 109993 29 100.0 32 ............................. TATTAGAAATTTAAAACGCATACGGGGCGGCA 109932 29 100.0 32 ............................. CGTTCATTTCGCTCGACTACATGGACTTCGTG 109871 29 100.0 32 ............................. GGGTTTTTATTGGTAGAAATGGTAAAAAGTAT 109810 29 100.0 32 ............................. TCGCGTACAACGTCAGCCAGCAAACCGCAGCC 109749 29 100.0 32 ............................. TTCAAGGCAACGACCGACGAAGCAATCAAGGC 109688 29 100.0 32 ............................. CTAGATGGCATCGATGAGACAACGCAGCGCCG 109627 29 100.0 32 ............................. GACGGCGACGTTTTCTAGTTCGCATATGCACA 109566 29 100.0 32 ............................. TGCTGGCTATAACGTTGCACTTGATGACGCAA 109505 29 100.0 33 ............................. TGAAAACAGACAGCGTCGAGGTGGCAACCATGC 109443 29 100.0 32 ............................. CGTTTTTGGTGCGAGAAGTCACCAAACAACTT 109382 29 100.0 32 ............................. GTGGTGCGCAAGGGCGGCGTTGGAATCGAGAA 109321 29 100.0 32 ............................. GTTGCCAGGTGTTTTGTCGCGGCACTGATTTT 109260 29 100.0 32 ............................. GCCAGATAATCTGGCCTTTGGGTTTAACACAC 109199 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 25 29 100.0 32 GTGTTCCCCGTGCCCACGGGGATGAACCG # Left flank : TCCGATGATCGAAGAGGTATTAGCGGCAGGTGATATTACACCGCCTGAACCGCCTCATGACGCCCAACCACCAGCTATACCTGAGCCAAAATCAATCGGTGATAGCGGACATAGGAGCGGCTAGATAATGAGTATGCTTGTTGTCGTCACCGAAGCCGTACCGCCAAGGTTACGTGGCCGACTTGCGGTCTGGTTGCTCGAAGTTCGCGCTGGTGTTTATGTGGGCGATGTAACACGTCGCGTGCGGGAAATGATTTGGGAGCAAATAACTGAACTCGCTGATGTCGGCAACGTGGTGATGTGTTGGGCGGTGAATAATGAATCAGGTTTTGACTTTCAAACTTATGGTGAAAACCGTCGGGAGCCTGTCGATTTAGATGGTTTAAGGTTGGTGGTATTTAAGCCGAGTGATGAGGATAAATAAGCCCAGTTTGCTCTTTAAAAAGTTGGTAGAAAAATGCAGGTCGATTTTTGTTATATAAAACAGTAATATCCGCTTA # Right flank : ATTTTCGCTGAGATGGGTGGCTGGGAATGTTTGTGTTCTCTGTCCTCACGGGAGGTGAGATTGGAGAGAGTGTCGAACATGTTACGAGTAGGTGTTTTGGCAGCATATCGATACACTATTTGCGTTAGTAATAACAAGGGTCCTCGATAAGGCTGAGACCGTCTAATCTCAGCCTGATAATGTTGCCGAGTGCTAATAAGCTACGCCTCACTCAGTTGTTCGACCGCCTCCAGTGCTTGAGAGCCGTAAATCAATGACGGGCCGCCGCCCATTACGATCGCGACGTTAATGGTCTCTACGCATTCTTGTTTGGTTGCGCCATGTTTGAGCGCGGCGGCTACGTGTGCACCAATACAGCCATCGCAGCGTGCGGCAATACCAATCCCTAGTGCAATTAACTCTTTGGTTTTTACGTCAAGATCGCCCTCTGCCATGGCTGCCCGATGAAGCTGTCCAAATGCGGACAGAGTATCACTGCTGTGAGCTTTAAATTGTTTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTGCCCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.70,-10.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 89176-90043 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEW01000001.1 Salinivibrio sp. IB868 scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 89176 28 100.0 32 ............................ GTCAGTGGCAAGGCCACACAGCGACGCTTTCT 89236 28 100.0 32 ............................ TTGAAGATGATCCCCCGGCTATCGAATACCGC 89296 28 100.0 32 ............................ TAGGGTTGGGATTTCGTAACGAGCGCCCGAAA 89356 28 100.0 32 ............................ GGCGCGATGCTGTTTATCGATGACGCGCATAA 89416 28 100.0 32 ............................ TCGCTGAAAGGCATCCTCGGCCCTGGCGCCGA 89476 28 100.0 32 ............................ TTGCGCACTTTGCCTGCGACAATCGGGTCGAT 89536 28 100.0 32 ............................ TTTCGCCATTTTCTGGACCATCTGCCCCGCGT 89596 28 100.0 32 ............................ GTGAGCCTCAGTGTCGTGTAGTAGCTGGACAT 89656 28 100.0 32 ............................ TAGACAATCAGTGTATTTTTACTCGGTTGGTA 89716 28 100.0 32 ............................ TGGCGTTGTCGACCTGGCCACCGCTTCCGGCC 89776 28 100.0 32 ............................ AGACGCAGACAATGGTGACGCGTCAAGATATG 89836 28 100.0 32 ............................ ATGTGACAGCGGATGTTGCTATCGGTGTATGC 89896 28 100.0 32 ............................ GTTTGCGCTTGCTCAATATGACATTGTTCATG 89956 28 100.0 32 ............................ TTGGCGTAGTTGTTTTGCTTGTAGTACTCCAA 90016 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 15 28 99.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CACTTATCGTCAATATGGTCACTTTTTGGCGGCTTTAAACTTGTATTGTGTCTTACAATGGCTACGCACCACGCTCCTGGAACGCAGGGCTGTGTGCTTGGTTTTGCGACCACGTGTACGCGTACGCCATACTTTGAAACTACGCGGTTTTAATTCACGTCGCATTAAAGCAATCACATCATCTTGGCGTAGCCCATAGAGTGCTTCAATCGCCTCAAACGGGGTCCTATCTTCCCACGCCATTTCAATGATCCGGTCTAAGTCACCAGGCTCAGTCAGTCGCATAGTCTCCTCCTCGCATTGGACTAATAATTACGTATACGTTGAGCAACGCGGATCAATAAGTGGGGATGCCTAAACCCCTTATGACCCTTATTTTTTGACTTTTTAAAAATAAACAATAAATACAGCTAGTTAAGAAAGGCCATTTTAAACAAGGGTAAAAGGCCATTTTTATCCTAACGGCCTGTTGTTCCGAGCTATTATTACGTTATTCTATT # Right flank : GACACAAGCCCCAGCACTATGTTGGATAGGRGACATTGCYAACGGGCGCCTRTCACGATCGAGRTTAATCGTTGGCGCCGATGTCGGAGGCGCGCAGKCYGCTTGGRTAATAGATGGCTGACATTGCACTGGCGCTTGTCCGACCTACGCACAGGCAGCGTAGGTGACACAAGCCCCAGCACTATGTTGGATAGGAGACATTGCCAACGGGCGCCTGTCACGATCGAGRTTAATCGTTGGCGCCGATGTCGGAGGCGCGCAGKCYGCTTGGGTAATAGATGGSKGACATTGCACTGGCGCTTGTCCGACCTACGCATAGGCAGCGTAGGTGACACAAGCGCCGGTACGGTGTTGGATAGATAAAAACTGTCAACGGGCGCCTGGCTCGATTGGCGCTTATATCAAACGATGTAAATGCACCATGCTAGTCTTGATGTTGTGACTTATTAAACAATGAATATGTTGTAATTCCTTAAATGACAACTAATATGTTGTATATA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 92298-92985 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEW01000001.1 Salinivibrio sp. IB868 scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 92298 28 100.0 32 ............................ GCCCAGGAGAAGGGCCGCGAGTTCACCGACTT 92358 28 100.0 32 ............................ TGCGGCTTGCGGTCGTCGGTCAACTTGGCCGT 92418 28 100.0 32 ............................ TGTGGCCGCTGTGTGGTCGCAATGACTTGGAT 92478 28 100.0 32 ............................ AACCCGCTGCGCGTATCGGCCACCACTGCGCC 92538 28 100.0 32 ............................ TTCGGCGACATTACGCGGCGGGACGACTTAAA 92598 28 100.0 32 ............................ ATTCGAAAAGCTGCTGATCTGTTTTACCCTGC 92658 28 100.0 32 ............................ AGACAAAGACAAAAAAGTATCGGCGCGTTGTT 92718 28 100.0 32 ............................ ATGATGTACACCGCGCCCTGACATTCCGTGGT 92778 28 100.0 32 ............................ AACATTACACGGTGGCCGTTATAAAACGCCCA 92838 28 100.0 32 ............................ TGTCTCGCTCGGTGATGGGGGTAGCGAATTAC 92898 28 96.4 32 .............C.............. TTCAGTCGCAGCGTAGTACCGTGTGATGTTCG 92958 28 82.1 0 .............C.......G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 12 28 98.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : TGGACGATCTGTTACCCCGACCGCATGTTGCCGCGTTTAGCACCGCTTTATGATGTGGTCTTTACGCAGCCTTATATTGAATATGACAACATTGCGTTGAAAATGGCGAAAAGCAAGCGTTGGTATGATATTGGTTTGAGCCATTTCGAACGCTGGTCGCAAGATGTGGGTGTGCCGTGGCAAATGATCAAACCGCACCTATTGGATACGATCAACCTGGCGCGAAATATGTGGCCAAATCAACTTAAGCAATTACCGATGTTAACGGAGCACAAAGCGATGCTACGTGATCATTGGAAAGCCCTGCACGAGGACTTCACCATCGGTTCATGATCCAGCCAAACCGGGCGCTAAATCGGCGCCTTCTTACCCTTATTTTTTGGCTATTTAAAAATAAACAACAAATACAGATAGTTACGGAATCCCCTTTTAAACAAGGGTAAAAGGCCATTTTTATCCTAACAGCCTGTTGTCACTGACGATTATTAAGCTATTCTATT # Right flank : GACACAAGCCCCAACACTATGTTGGATAGCGGACATTGCCAACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCCTTAATGTCGGAGGCGCGCAGTCCGCTTGGGTAATACATGACAGACATCGCACTGGCGCTTGTCCGACCTACACACCATTTTAATATCGGCGGTGCCATTGGCGTACATTGGTTATCGGAATAGCCACTTTTGGCCCGATAATACCATTGGCGTAGGTGACACAAGCCCCAGCACGGTGTTGGATAGATGCACATTGCCGACGGGCGCCTGTCACGATCGAGGTTAATCGTTGGCCTCAATGTCGGAGGCGCCAGTTGCACTGCGCGCGGTGCAAATCACACCTAGCTTGTACGATCGAGTTAGCGCTTCTCCGACATACGCACAGGCAGCTTAGAAAGGATTGAATGAGAAGTCTTATGTGTGCTGCTATATACCTAACGTTGTTCGGCTGAATCAATATGAGTCAAAAAGTTGGGAGTCACT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 103779-104706 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUEW01000001.1 Salinivibrio sp. IB868 scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 103779 28 100.0 32 ............................ AAAAAAATGGAAGCGCGTGAACACCTAGGAAA 103839 28 100.0 32 ............................ GCCAATTAGGCGCAATCACGCCATAAGCGGCC 103899 28 100.0 32 ............................ TGAGTATCCGGCTGCGCACTTTGAGAAGAACT 103959 28 100.0 32 ............................ AAAATCCGCAACGGTTACACTCAAAGTCGCAA 104019 28 100.0 32 ............................ TGTTCGTCATCGTGCACACCTGCGGTCTTACG 104079 28 100.0 32 ............................ GTGCTGTGTGTGCATCACGCCGGTTTCTTTCT 104139 28 100.0 32 ............................ ACTTGGCCAGCGGGGCCAGGTTGGTGCCCTCC 104199 28 100.0 32 ............................ TATGAAATAGCGTTGCCACAGTATCAACGCGG 104259 28 96.4 32 ..................G......... ATGCGATGCAAGCGCAAGCCGTGCAAAGCTCG 104319 28 100.0 32 ............................ TCGCGATGGTGATGTATCCATTCAGTGGATGA 104379 28 100.0 32 ............................ CGACGAAACCACAGCAAAAGCTGGCAGCGTGG 104439 28 96.4 32 ..........A................. TATGACAAGGGTAACATAAAGGAAACTAACCC 104499 28 100.0 32 ............................ GCACGGCTAATTGATACCCCCCCGAGTACGCT 104559 28 100.0 32 ............................ AACAACGCACTTTAAAATCAATTTTGAATCAC 104619 28 100.0 32 ............................ TTTAGTGGGGTTCGAGCGCTCACTGTTCAGAA 104679 28 85.7 0 .....................G...GTG | ========== ====== ====== ====== ============================ ================================ ================== 16 28 98.7 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTGCAAGACTATGCCTACTTTAAACGCTGGAACTACAAATCGCCGCAGCGACTGTATAAAAATGTCGATCGGCGTGCGGCCGCGATTGCCAGCAAAAATGGTTACGATGAGGAGGAAGTAAAGCGTCGTTTGTTGGCAAACATTAAAACGGACGACAAACGCTGGTCCCTGCCTTTTATTCAAGTGACCAGCCTGTCGAGCCAAAAACGAGCGGGGCAGCCAAATACCGAGTTCGCCTTGTATATCGAGCGGGAACTCACCAAACAGCCGCCCAATAATGGCCAACCATTCACCTGTTATGGGTTAAGCAGACGAGAGCCCGACCAGCAATGTGCGGTGCCGTGTTTTTGAGGGGGCAACCCCTCTTTACCCCTTCTTTTTGGCTCTTTAAAAATATACGGGAAATACAGTCAGTTACAGCAGGTGCTTTTTAACAAGGGTAAAAGACGATTTTTATCCTAACAGCCTGTTGTACCTGACGATTGTTAGGTTATTCTATT # Right flank : GACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCCAACGGGCGCCTGTCACGATCGAGTTTTATCGTTGGCGCCGATGTCGGAGGCGCGCAGTCCACTTGGGTAACAGATGGCTGACATTGCACTGGCGCTTGTCCGACCTACGCACAGGCAGCGACGGTGACACAAGCCCCAGCACTATGTTGGATAGGGGACATTGCCAACGGGTGCGCGTCGGCCAGGTACCTATAACTCACATCATACTGGCGCTTGTCGACCTACGTGAACGTTAACGTCGGTGGTGCCATTGGCGATGCTGCCTGTCTGGGTTTTTCATTGAAATGACTAGTTTAATGTATCTATGAGCCACTTAACTTTATGGCCCTACATTAATCGTTGCGTTTATTTTTATCGAGTAATCAAAAACTAATTGATATCGAGACTTTTCCTGTCCAGCTTTTTTTAATTGATGGCGAGAATCTATTCTACGATCAAACGGTAGTGGCATTTTGGTCGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //