Array 1 6145-7303 **** Predicted by CRISPRDetect 2.4 *** >NZ_LAVY01000011.1 Streptococcus gordonii strain PV40 Contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 6145 36 100.0 30 .................................... AAAAACTACGTATAAAGTTGTGGCACCTGC 6211 36 100.0 30 .................................... AACCTCATCATTAACTACCACTTGATCAGC 6277 36 100.0 30 .................................... ATTTTTCCCCAATTTTCCCCAAATAAAACT 6343 36 100.0 30 .................................... TTCATCTAAAATTATTTCTTTTGACGACCT 6409 36 100.0 30 .................................... ATCTAAACTTTATGAAAGTTATGTAGAATT 6475 36 100.0 30 .................................... TTATTATTGGTATGAAATGAGGGTTGAATA 6541 36 100.0 30 .................................... CCTTTCCAATAATAAAATCAAATTCCGTTG 6607 36 100.0 30 .................................... ACTCGGTTCAGGGCTTAGTTCTGGTGTATC 6673 36 100.0 31 .................................... AAACCTTAGAAACAGACATGGGACTTGTCAA 6740 36 100.0 30 .................................... TCATATCACCAAGAAAGCCAAGGATGATAT 6806 36 100.0 30 .................................... GAATAAGCCCAAGAATAGATGGGCGCTTTG 6872 36 100.0 30 .................................... TATGGGTATGCCCAAGGAAAACCGTAGTAA 6938 36 100.0 30 .................................... TCATATCACCAAGAAAGCCAAGGATGATAT 7004 36 100.0 30 .................................... TTCATCAAAAATCATTTCTTTTGATGACCT 7070 36 100.0 30 .................................... TGAGGGTGGAGTTCGTTTTTGGCACTATCG 7136 36 100.0 30 .................................... AAAATTTCTGCGAGAGCTTGCTAAATACGA 7202 36 100.0 30 .................................... CAGAAATCTGAAGAAAAAGCCCATGCTGAA 7268 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 18 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAATCCATGATTGAAAAGTTGGTTGCTACGATTATAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCCGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTAAATCAACTAAGTGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCCCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CAATATTAAGTTTTAATTCAATTCAACCGTACTAGTTCAAGGTTGGTGAGGGAGTTTGTGTTATTTGCAAAAAATTTAAAAAGATTTGTTAAAATTGTTGACAACCACGGAGAACCCCGATACGATATAATTAGAAAGGAAGAAGATATGAAGATATGAGAGGTTGCCAAATTAATGGAAGCAACTGTAAATCTGTTAACAGGTGTTGCCAGTGTTTCCATGGTAATAAAAAAGAGCCAAAAGAATGTAAGTGACGCAAAGATAAACAGTTCAAGTAAGGCTCTGGTAGGTAGGGATGAAAGCCCCTTAGACCTTACCTCGACTATATCATATCAGATAGTACAATGAAATATTTACCAATTTTTACAATCGTATTTTTTGCTTTCTTGCTAATTTTAAAAGATAGACGGAAGTAAGGATGGAGTTCAAATGAGAAAGCAAATAGAAAAGCTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGTGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //