Array 1 1031088-1029453 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGPT01000001.1 Mobiluncus holmesii strain NCTC11657, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1031087 36 100.0 28 .................................... ATGGACGCTAATGGCCTATCTGCGCGAA 1031023 36 100.0 28 .................................... GTAATTACCATCATTGCCGCGCTAGTCG 1030959 36 100.0 28 .................................... CGCCAGACCTACGCCTTTTGCTATTCCA 1030895 36 100.0 28 .................................... AGGCAAATGAGCTGGTCGAAGGGTCTTA 1030831 36 100.0 28 .................................... AGGAAAGGAAGAGGAACCAATGAACGAA 1030767 36 100.0 28 .................................... GGCTGGCGCGGATTCTGCCAAGAGTCAC 1030703 36 100.0 28 .................................... CCGGAATGCTACGCGTGGCAAGGGGATT 1030639 36 100.0 28 .................................... TCAAGTTATCAACGGTTAAATTACTTGT 1030575 36 100.0 28 .................................... CATCTTGTGATGACAATCTTCCAGCGCC 1030511 36 100.0 28 .................................... TTAGGGCGGCGATTTCGGAAACCAGCCT 1030447 36 100.0 28 .................................... GGGTGTTGCGTAGCCAGACCTTTGTAGG 1030383 36 100.0 28 .................................... GCGTGGTACGGGACGTAAAACGGCTAAG 1030319 36 100.0 28 .................................... GGGGAAAGTCGAATACCTGGGCAGGGAC 1030255 36 100.0 27 .................................... CCATCCCGCATTCACAGGTGTGGATTA 1030192 36 100.0 28 .................................... CGAGGAGGCGGCTAAGCGCGAGGCTGAG 1030128 36 100.0 28 .................................... TAGAGACGATACTAACACCCACTATGTG 1030064 36 100.0 28 .................................... TGGGTAAAACTACCCCCCACCTACATGC 1030000 36 100.0 28 .................................... ACGGATATCGTCGCGCAGCGCCGCCCGG 1029936 36 100.0 28 .................................... GGGCACAACATATTTGCGTATCTCGACC 1029872 36 100.0 28 .................................... TACACTTTTAGCGCGTGGCGTGCTGAGA 1029808 36 100.0 28 .................................... CACCAGCAAGCCGCATGGTATCTCGACC 1029744 36 100.0 28 .................................... AAAAGGATTTCTTCCCTGCGTCCCTCTG 1029680 36 100.0 28 .................................... GTGGCTTTCAGAGCATGAGTGGCAGCCC 1029616 36 100.0 28 .................................... AGCCGTGTTCAAACCGTCGCGTAAAGCG 1029552 36 100.0 28 .................................... CGATTGTGCGTCTGCATTTCACGGACAG 1029488 36 83.3 0 ...................A......C...T.T.TT | ========== ====== ====== ====== ==================================== ============================ ================== 26 36 99.4 28 TAAGTATATCAAGGATTATGTGAACTGATTCCCAGC # Left flank : CCACCCGAAAGTCGATTCCAGCCGAGATGACCCTGCTAGCTCAACATTATGGGCAGTTAATTGAGGGCGACATTGGGAAGTTCGGGGTTCCATCTTGGAAGCCGCCCAGTAAGTTGGGGCTCTAAGCAATGCCGGGAGAACCAGTGTGGTGCATGGTGATGTTCGACCTACCAACCAAAACCAAGAAGCAGCGGCGTGCATATACAGGTTTCCGGCGCTATCTGCTAGATAATGGGTTTTCGCAGGTGCAGTTCAGCGTTTATTCCTGGTACTCTCCCGCTGGTCACTTAAGCGTCAGACTTTTGAAAGGTATTAAAGCCCATTTACCTCCAGGTGGAGAGGTCAGAATCTACCATCTAACAGATCATCAGTGGGCAACTGCGTTGAGATTTTCCAACGCTAAGGAGGTAAAACAAGAAGAAGCGCCCACGCAACTGATGCTTTTTTAGGTCGCTAAATCTCAGTATTTCCTTGATATATCAGGGAAAAATGCCCTCTAC # Right flank : AGAATTTACAATTAATAAGTTGCAAAAAAGACAGTTATATTTGAGATTATAAACGAGAATCATTAGCGACACATATAGGCAGTGTTTATACATATCCACTTCGTATATATTTCAGTCTTTGTGTAAGTCGATGCCTCGTCTTATGCAAGAGGGAGGAGATAGGGCGTGGACTTCTGTCATCTTGCACAGCGAACACGTTGCCTCGGTGATGGTGCCAGTGCAGCAGGGCGAACGGGTCACTGTCATGATGCGTCGTGAGTTATCGGGGATTTCGGGTACAGCAGAACTATGCCCGCTGTGCATGAACGACCGATTTCAAAGTGGGATTTGTGTTCATGCCGATGCGCTCTTTGGTAAAGATGCAGGTAGGGATGATTCGGGCTATAGAGAATTCCGTACGGGAGAAGTGAAACTGGTCGTTCGCGTCTCAAGCTCGAAAGCTTCGCTTTTGTAGTGGAAAATTTCTCGGTCTTTGGGTGCGCAACCTGCTGCGCGGCTTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAGTATATCAAGGATTATGTGAACTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //