Array 1 36017-36991 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SQDN01000190.1 Escherichia coli strain RUSPBB110 NODE_2489_length_161356_cov_39.627048, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=============================	==========================================	==================
     36017	    29	 100.0	    32	.............................	GTCAACGCTGGTCAGGCGTGGTACTTCCTCCG          	
     36078	    29	 100.0	    32	.............................	TCGTTGATGGTGTGATGAGTGTACAAAAAAAA          	
     36139	    29	  93.1	    40	...........................NN	NNNNNNNNAAATTAATTTCGAAACGGGCGTTGATGGTGAA  	
     36208	    29	 100.0	    32	.............................	CCAGGGAGCGAAGCTGTGGCCATGCTGAAAGG          	
     36269	    29	 100.0	    32	.............................	GGAAGAAGCGGTAAAGCGGGTTCCAGTTCAGC          	
     36330	    29	 100.0	    32	.............................	CCGCACACGTCGAGCTGGTGGGGATTAATGCT          	
     36391	    29	 100.0	    32	.............................	GTGACCATAAGGGCATTTCATACTGCCTTGCT          	
     36452	    29	 100.0	    32	.............................	GTGAACGTGACAACGCCCGCGACAGAAACGTC          	
     36513	    29	 100.0	    42	.............................	NNNNNNNNNNACGACTGAATCCGGCGAGGCTATCAACTGGCC	
     36584	    29	 100.0	    32	.............................	CAGGGTAACTGGCTGCTCCTCAACCATTCCGC          	
     36645	    29	  96.6	    32	........C....................	GGGTTTTAGCGACCGGACCAGAGTACGCAACA          	
     36706	    29	  96.6	    32	........C....................	TTGCGCCTTAAGTTCCTTAACTTCCTCTGTAT          	
     36767	    29	  96.6	    32	........C....................	GGAGTGATGAATTGGAAGTAACGGATAACCGC          	
     36828	    29	  93.1	    39	...........................NN	NNNNNNNNCTGGCGCACCTTACGCAAAAATAGACGTAAA   	
     36896	    29	  93.1	    38	...........................NN	NNNNNNNNGTTCTATTTCCTCGGGATTTGCCGACACGC    	
     36963	    29	 100.0	     0	.............................	|                                         	
==========	======	======	======	=============================	==========================================	==================
        16	    29	  98.1	    34	GTGTTCCCTGCGCCAGCGGGGATAAACCG	                                          	       

# Left flank :   GTCCTTGCCGCCGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCACCAGCTATCCCGGAACCTGAATTGCTAGGTGATAGTGGTCACCGGGGGCGCAGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTTGCAATCTGGCTCCTGGAAGTACGTGCCGGTGTTTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCCCAACTGGCAGGTTGCGGAAATGTGGTCATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATAAGTTACCCGTTCTTTAAAAATAAGGAAAAGTTTGAATTTAGTTGGTAGATTGTTGTTGTGGAATAAAATTGTTTAAAAACAGATACGTATGCTTAGT
# Right flank :  GGACGCACTGGATGCGATGATGGATATCACTTAGAGTTCCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCAGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTTCCAAGATTCCAGTTGGTCGCCTCCACCGAAAGTACCGCAATACCGGCTTTGTCGAAAACTTCGGCGTCATTACAACAGCCAGTACCCTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAA

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCTGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [5,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCTGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-11.30,-5.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0.41   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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