Array 1 75259-72107 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTF010000002.1 Acinetobacter baumannii strain A41 P_contig000002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 75258 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 75198 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 75138 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 75078 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 75018 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 74958 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 74898 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 74838 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 74778 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 74718 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 74658 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 74598 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 74538 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 74478 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 74418 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 74358 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 74298 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 74238 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 74178 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 74118 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 74058 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 73998 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 73938 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 73878 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 73818 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 73758 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 73698 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 73638 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 73578 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 73518 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 73458 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 73398 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 73338 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 73278 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 73218 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 73158 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 73097 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 73037 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 72977 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 72917 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 72857 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 72797 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 72737 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 72677 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 72616 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 72556 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 72496 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 72436 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 72376 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 72316 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 72256 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 72196 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 72136 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //