Array 1 264853-273826 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZDQ01000012.1 Moraxella osloensis strain CCUG 57516 contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 264853 28 100.0 32 ............................ TATGCCTAATTTTGTACTTTGCAACGTAAATT 264913 28 100.0 32 ............................ ACTCCAATATGTACCAGTGCCACAAGCGTGCG 264973 28 100.0 32 ............................ TGCTTGATAGTAGCTAGACTACCATCGGTTTG 265033 28 100.0 32 ............................ GCAAAATTTAACAGTAACAGCCTTGGCAATGT 265093 28 100.0 32 ............................ TTTGGGAAATTGCTTTTTTTGCCGTTTATTTC 265153 28 100.0 32 ............................ TATACCACGCAATTCACAGCCACAGCGAACAC 265213 28 100.0 32 ............................ TTTATGGGGGTCATAAAGGGTTATAGCAGTAT 265273 28 100.0 32 ............................ ACTTTGCCAACTCTGCTTGCTTGACACCTAAG 265333 28 100.0 32 ............................ CAAATTATGAACTCACGTCCCGATATCCGGTA 265393 28 100.0 32 ............................ ACTGCTTGACCGATTTTCTTTAGTGTTAAGTA 265453 28 100.0 32 ............................ TGTTTTTGAATCAGTGCCAAATGATGATGAAT 265513 28 100.0 32 ............................ TGTTATTTTTTCTGCAAGTCTCGTAGCTGTCT 265573 28 100.0 32 ............................ AATCAGTTGCAGGAACTAACAGGTGTGGCGCA 265633 28 100.0 32 ............................ AATCTCGCCAGTCCTTTTTGCGTCACTTTAGT 265693 28 100.0 32 ............................ CGAAAAGATTTGTACTTTTTCAGCCGCTATAT 265753 28 100.0 32 ............................ TTAGATGGGGCGCGATGGTGTGGAGTGGTGAG 265813 28 100.0 32 ............................ AATCTTCTTTGCGTGCTACGCCGCCCCATTTA 265873 28 100.0 32 ............................ AACCACTATCAAGACCGCAAGTTAGTTAAGCA 265933 28 100.0 32 ............................ ACATCAAGCGGCTGCAATAACACGCCTTGACT 265993 28 100.0 32 ............................ AAACCTTTAGGCGAGCCGTCTATCTTGAACGC 266053 28 100.0 32 ............................ AAATCATTTGCTGGTGAGCAAAGTGGCATCTA 266113 28 100.0 32 ............................ TGTATCAGTGGCGATTTTTAACAGCCATAATA 266173 28 100.0 32 ............................ TGTGGCTTGGTTGGGTCACGCACTAAGCGGTA 266233 28 100.0 32 ............................ TGTTTAATGTATATGACTTCCAAACAAATCAA 266293 28 100.0 32 ............................ TTCAAAATGACCCATTCTTACGGCTTGCTTAA 266353 28 100.0 32 ............................ ACAAACGCTTAATTTTAACGGTCATGAATTTA 266413 28 100.0 32 ............................ AAAGGTCAATTCTTAAAAATAGGATAAATATC 266473 28 100.0 32 ............................ AATTATTGAGCAAACATCGCGGACTTCCTTTA 266533 28 100.0 32 ............................ TGCCAGTAAATAGCCGCTTAGGTCATTTTCAT 266593 28 100.0 32 ............................ TTATCTTCAATCACAATCGGTAATTCTTCTAA 266653 28 100.0 32 ............................ TATGCGACACGTTGACCCTGCCCGCCCTTTAT 266713 28 100.0 32 ............................ ATTTTGTACGGCTTTAATCGTGTCAGCGTCCA 266773 28 100.0 32 ............................ AATCGCGCTGACAAGGCGTTCCACTACCATAA 266833 28 100.0 32 ............................ TTAAATAGTTTGTTTGGCAATCAAAATAAGTA 266893 28 100.0 33 ............................ CAGTTGCATTGTCAATATTTTACTCAAATTTAT 266954 28 100.0 32 ............................ GAATTCATTTCTAAGTAGTCGTGACCGTTTTT 267014 28 100.0 32 ............................ TAGTGGGCATTATTGATGTGGATGCGCCATTT 267074 28 100.0 32 ............................ AATGGCGGTAGCGTTACCACTATTTCAGTGGC 267134 28 100.0 32 ............................ TTTTTTAAAATACTGTGAGATGATTTCAGCCT 267194 28 100.0 32 ............................ TTTAGGGTTAAGCATTGTCATTGCGCCCCCTT 267254 28 100.0 32 ............................ AAAATACAGGGGCAAAGGCAACACAGATAAGC 267314 28 100.0 32 ............................ AAAATGCTTTACTAAATCTCTGTGAATTTGTG 267374 28 100.0 32 ............................ TTGCTGAGCATTTGACTAGAAAACTTCCTAAA 267434 28 100.0 32 ............................ TGTTCTTGTGCCAGTGCATCCTTTTCGGCTTG 267494 28 100.0 32 ............................ TTTAACTTCCATTTCGTGGGGTTTTTTTGCGC 267554 28 100.0 32 ............................ CGAAGCAGGGCAGCCAATACGCAATGCCCATC 267614 28 100.0 32 ............................ AAAGATTAACTACTATGACCGATAAAGCTGTC 267674 28 100.0 32 ............................ ATTTTGATGTTTTGCTTGCAAACGTAGCATAA 267734 28 100.0 32 ............................ GTTAATCGTTGCCACATCGGTTTTGCCGTCAA 267794 28 100.0 32 ............................ ACTTTCGCGCATCTTCGATATAGATTTTTGTT 267854 28 100.0 32 ............................ TCAATGTCATGATTTGCTAGATAATGCTTAGG 267914 28 100.0 32 ............................ ACTCTAGTTATTCAGCGACATTGGCGGTCAAT 267974 28 100.0 32 ............................ ATGATTACTCCTAGATAAATGCCTGTCTTAAG 268034 28 100.0 32 ............................ TTTTCTGCTTGCGGTCTTAAAAGCCACTTGCT 268094 28 100.0 32 ............................ TGTTTCCGCTATCTCTTTAGCATTTGCCTGTT 268154 28 100.0 32 ............................ AATGGTCTTTTGACTTGCTGTCATCTTTGAGC 268214 28 100.0 32 ............................ AACACTTTGCGGTGTTGGTTTTTTTGTTTGAC 268274 28 100.0 32 ............................ CAATGCTGCCAGCGGTTGCAGCTGTGCTGCTT 268334 28 100.0 32 ............................ ATTAAAACACCTGATAATTCAAGCTATGTGTT 268394 28 100.0 32 ............................ AATTAATTGATAGTATTTTTAGCTACGACAAC 268454 28 100.0 32 ............................ AATCACAGCGGATAATGACCAATTTTTCGCAA 268514 28 100.0 32 ............................ AGACAAATAGTTATCGGCCGTTACCCAACCTT 268574 28 100.0 32 ............................ AATATGCACATCGCGCGCCTTTGTGACAAAGG 268634 28 100.0 32 ............................ AAAGAAATCAAAGCGCGTGCCGACGATATGGG 268694 28 100.0 32 ............................ AATATTGCTTGCCACAGTGATAAGCTGCTCGC 268754 28 100.0 32 ............................ GCGCTCTTTGGTATCTTTGACGATATCGGGCA 268814 28 100.0 32 ............................ TTGCGCGAGCTTGCCAATAAATACACTGATGG 268874 28 100.0 32 ............................ GCTTGAGATAAAAGAGTTATCCGAACTCAACT 268934 28 100.0 32 ............................ TGCTAATGAAGTAATTTTTGCAGAAGCCGCTT 268994 28 100.0 32 ............................ GTATAGTGCTGTGCTATACATCCCGATACCAC 269054 28 100.0 32 ............................ ATCTGACGTTGATAATAGATTGCGCTGCTAAG 269114 28 100.0 32 ............................ AGTTATCCAAGACCCAACAACGCAAATGGCAC 269174 28 100.0 33 ............................ AACTGCATCAACTTTAGTACCTACTTTTTCACC 269235 28 100.0 32 ............................ AGTCTTTAAAAATCTCTAAAGAAACAGAAAGA 269295 28 100.0 32 ............................ TGCGAATAACGCAATTAAATATAAAGTCTCTG 269355 28 100.0 32 ............................ AAAGATAACGCATCAAACCATTTCAAATGCTT 269415 28 100.0 32 ............................ TAACTATGTCACCCCCACAAGTAAATACTCTC 269475 28 100.0 32 ............................ TTGACTATAACCGCTAATTGCAAAATCATAAT 269535 28 100.0 32 ............................ ACGATAGACGATGTAAGCGGCTGGGGTGATTT 269595 28 100.0 32 ............................ GCTAAGGGTTTGACCCCATAATATTGCGCTGC 269655 28 100.0 32 ............................ CTTAGTTATGCTGGTATCAAGTTTTCATTCAG 269715 28 100.0 32 ............................ TTATTCACATTCACCAATAAAACATTGTTATA 269775 28 100.0 32 ............................ TTATGATAACCTACACTTATTTAGTGGCTATA 269835 28 100.0 32 ............................ ATACATTATTTCTGTATCAATGTATATCCTTT 269895 28 100.0 32 ............................ AAACAAATACAGGCGCATGACATACGACAAAA 269955 28 100.0 32 ............................ TTACATTGCTTTACGATGGCTTTTTTGGCTTG 270015 28 100.0 32 ............................ TTTGATTGATAAATGAATTTGCTATAAATAGC 270075 28 100.0 32 ............................ ATTCACGGTATCCAGCAAGTGAAAACATTCGC 270135 28 100.0 32 ............................ TCTTTGTGTTTTTCTTTTAACTTAGCAACCTC 270195 28 100.0 32 ............................ ATGACTACTTACAACCTAAACATTGCTAACAT 270255 28 100.0 33 ............................ AAATAGACTGAGCGAATTTATTGCTTATTCTCT 270316 28 100.0 32 ............................ TAATAAGCCGCCAACGAGTGAAGCGCCTGCGC 270376 28 96.4 32 .............C.............. ACCTTGATAGATAACAGAGATAAAAAAACGCC 270436 28 96.4 32 .............C.............. CATACTTTCAAGCTGACGGCTCTGCAGTTAGT 270496 28 96.4 32 .............C.............. TTATCAAATTAACTTTTCTGTGTTCGGTCACT 270556 28 96.4 32 .............C.............. ACCTTGATAGATAACAGAGATAAAAAAACGCC 270616 28 96.4 33 .............C.............. ATCATCATTTGGCGGTAAAAAAGGCTGTTGGAT 270677 28 96.4 32 .............C.............. AAACAAACCAAACCAGCGTTATGATCCAACTT 270737 28 96.4 32 .............C.............. AAAATCATATATTGTTTATGATGAAGCGCAGT 270797 28 96.4 33 .............C.............. TTACCAGTCTTTTGATTAGTAAAGACCCAATCC 270858 28 96.4 32 .............C.............. TAACTGTTTGCCCTTTTCATAACCGCGATATA 270918 28 96.4 32 .............C.............. TTTCGGTTGGGTCACGAAAGTATATCAATACG 270978 28 96.4 32 .............C.............. GCAGGCATAACAACCCGCTTTCCATTAAATTC 271038 28 96.4 32 .............C.............. AATCACTGTTAACGGTGAAACTTACGAACCTC 271098 28 96.4 32 .............C.............. GTCCTTGTTGTATGCCGTACACTTGCCCCCAA 271158 28 96.4 32 .............C.............. ATTGATGGCATTTTGCATTTGCTGTTTGGTGA 271218 28 96.4 32 .............C.............. CACAAGCGGTGGTGCGTAAAACTTTCTTGGAT 271278 28 96.4 32 .............C.............. AAGGAATTGCCACAGTATAGGAAAAATGGCAA 271338 28 96.4 32 .............C.............. TTTGTGAATGAATCTAATGGGCTTTGATAAGG 271398 28 96.4 32 .............C.............. TTTTAAGGCTTCAAATAGTGGGGCGTTTGCTT 271458 28 96.4 32 .............C.............. ACCACCAAACAACCCACCAAGGATTGCGCCAT 271518 28 96.4 32 .............C.............. ATGTTTTTTTGCCAGTCTTTGTGGAAAAAGCG 271578 28 96.4 32 .............C.............. AAAACCGAAAAATCAATAAAGCCCTACCCTAA 271638 28 96.4 32 .............C.............. GTTAATTGTCGCAGTATTGGTCGGATAGGCAT 271698 28 96.4 32 .............C.............. AATCACCATAAAACTGCATGGCTTTGATACGA 271758 28 96.4 32 .............C.............. TTAGACAGTGGAACAGCAGCCATAAGCCGTTT 271818 28 96.4 32 .............C.............. ATTACCATTTGTATCTATATCATAAGTTGGCA 271878 28 96.4 32 .............C.............. ACCAGCAGAAACAAAACCACCAGTGCGCCCAC 271938 28 96.4 32 .............C.............. GTTATCAAGATGCACACCCTTATGTACTACGC 271998 28 96.4 32 .............C.............. TATTTTTTCTGCTATAGCTTTCTGTGTTTTTT 272058 28 96.4 32 .............C.............. TAAAGTGTCTGATGCACCGAATATTGAAGATT 272118 28 96.4 32 .............C.............. ATATTGGTCAATGGCTTGACCGTCTGTCTTAG 272178 28 96.4 32 .............C.............. TCAAAATCCACAGCCGCGTCATTGCCGTATTG 272238 28 96.4 32 .............C.............. ATTTAGGGCAAATGCTAACGGTACGCATCATC 272298 28 96.4 32 .............C.............. TTAATGTTCAGCAGGTCGCCAGATGTAATCAC 272358 28 96.4 32 .............C.............. TTTGGCAAATGCTGCGGCTGGCAAAGTAGCTA 272418 28 96.4 32 .............C.............. AGAGCCGCTAACCACGTTGACAAAAACGCTGG 272478 28 96.4 32 .............C.............. ACGTTAGCGGTACTGGTGATTAACGCATTGCG 272538 28 100.0 32 ............................ AGCTCGGTGGTGTCTTATCTTTCGGTGTTGGT 272598 28 100.0 32 ............................ AGTAACCAAGACTACATTACTCATAAGCCACC 272658 28 96.4 32 .....A...................... CATACAAATTGCCAGGCGCTCACAAATGCGAA 272718 28 100.0 32 ............................ GCTATACGCCGATGACGCAGTTATTTTTGTAC 272778 28 96.4 32 .............C.............. GCGTGAATGTTGCGGCTTGATTGTCGGTGGTA 272838 28 96.4 32 .............C.............. ACATCGTCAACAAGGCAAGCGGCGGCACCGAT 272898 28 96.4 32 .............C.............. AAACCAATCTCGCATCTGCTTTTCTTGCCTAG 272958 28 100.0 33 ............................ TAACCGCTTTTTACAGGATATACCCAGCTTAAT 273019 28 100.0 32 ............................ TACGTATCGCATCTCAGGTGGGTTCCAACGTA 273079 28 100.0 32 ............................ AGTAACCAAGACTACATTACTCATAAGCCACC 273139 28 96.4 32 .....A...................... CATACAAATTGCCAGGCGCTCACAAATGCGAA 273199 28 100.0 32 ............................ ATTATCCAGACGTACCAAACTTGGGTGATGTG 273259 28 100.0 32 ............................ GCCAAGGAGATATTGCGCTGGTCAAACTTAAG 273319 28 100.0 32 ............................ TGTGTCCTTCACGCTCAATTTGCGAGCCAACG 273379 28 100.0 32 ............................ AATCAATAGGCGTCAGTCCACCAATTTCTAAA 273439 28 100.0 32 ............................ AAATACAAAGCCCTTATCAACGGTGTAAACCT 273499 28 100.0 32 ............................ AAGCGCAGTAGATAGCCAATAATTAAGCGTAA 273559 28 100.0 32 ............................ AGTATGGTGAGCGTTTGGAAGTTCCCCAGCGC 273619 28 100.0 32 ............................ TGTTCGCGCTCACTAGCACCAGGCGCAATGCC 273679 28 100.0 32 ............................ CGTGACGTTGCGACCGTGTATGCCGAGCAATT 273739 28 100.0 32 ............................ AATAGGAAAACACAACATGAAACAATTAAACA 273799 28 82.1 0 .............C........G..TCT | ========== ====== ====== ====== ============================ ================================= ================== 150 28 98.9 32 ATTCACCGCCACATAGGCGGCTTAGAAA # Left flank : GTTTGATAGATTATGTACATATCAAACGTATCCAGCCTGTACCCGAAGTGCATGGGCATGTAGTGGTGAGGCGTTACCGCTACAAGAATTTTGACAAAAAAGTGGCGGAGTTTGCCAACTTTAAGGGCATCAGTGACCAAGAAGCGTTGGCGCATTGTCTTGCCCATAAGCGTGCTATCAAACACTACCCTTTTATCACCCTAAAAAGTCAAACCACCCAAAATGACTATAAACTGTCAATTTGGCAAGAAGTGGCGAAGGATGAAAAAAGTGGCAGCTTGAATACCTATGGGATGAATAATCAATCAGATGCGGTAACCGTTCCCCACTGGTAATCAACCTTGCCGACAGACTATAAGGGTGAATAACCCTTATTTTTGACTCAATAAAAATAGGTATAAATTTCAATCAGTTATATCCAGGCAAAAAATGTAGGGTAAAAAGGGTATTTTTACTTGGTAAGCCTTGCTATAACTGCTTTTTTTGGGATAAAATTCCTA # Right flank : TTAATTAGTAAAACAGTGAAGTTTATTTATTTTTACTAAAGTGACCAAAAACAAGTGGGTGTGAAATTAAAATTCTTAAAAAAATGCGTGGTCACCAAATGGTCACCTTTTGGTCACCATTCAATTCCTGTAGTAAAAAAGGTGCCCAAAATCACAAAAGTGGTCAAAATTTCAACTCTCGAAAAACCAAGTAAACACTTGATATCACTGCAATAAAAAAGCCCCAATCAATCGATTGGGGCTTTTGGAATATGGTAGGCATAATCTGACTCGAACAGACGACCCCCACCATGTCAAGGTGGTGCTCTAACCAACTGAGCTATATGCCTAAAAGGGTCTAACAACCTACTTGCGTAAGTAGGAGTGCCATTTTACCAAAAAATTTTGCTTTTGCAAGTGGTTTTAATTTTTCGCTTCAATTTTTATTGCGCCATCTTCAGCTAAGTTTTCGTTAAGGTTAGGTTGTTTTAATACACTTAGCCACTCGGATATACCTCAGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCACCGCCACATAGGCGGCTTAGAAA # Alternate repeat : ATTCACCGCCACACAGGCGGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTAACCGCCACATAGGCGGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.70,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //