Array 1 8152-8575 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQK010000014.1 Anaerostipes hadrus strain MSK.13.43 NODE_14_length_68848_cov_248.498, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 8152 28 100.0 38 ............................ TAAGTTGTTTCTCTTATCTACTCTAGTAATGTTTTGTA 8218 28 100.0 38 ............................ GCATTAACGGTACCGATGCATACTGGTGTGGTTTTGTA 8284 28 100.0 38 ............................ CTAAAATCATGGGAAGTATCCCATACCCTCGTTTTGTA 8350 28 100.0 38 ............................ CTAAAATCATGGGAAGTATCCCATACCCTCGTTTTGTA 8416 28 100.0 38 ............................ CTAAAATCATGGGAAGTATCCCATACCCTCGTTTTGTA 8482 28 100.0 38 ............................ TTTAGAAAATTCATTCGATATACCGTCTATGTTTTGTA 8548 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ====================================== ================== 7 28 100.0 38 CCTATGTTATTCCTCATAGGTCTAAACC # Left flank : CTAATACCTTATAAGTATAACAAATTCTGTTTGATTTTTCAATATATGAATAAAAATAGTGAAATTTATAAAAACTATTCTATATTTAGTATATTAACTCGATCTATAAATTCTTTCATATCTTCCACATACTCATATGGAGCATATTCTGAATATATATCTGGATCATCTAAAATAACTATTTGCACCCCTTCCGCCCTTAATGCTTCCAATGTTCCTGGTAAACATCTAGCTTCATTTATTGTCTTACATCTATATGCTATGCAACCTTGCTGATCAAAAATTTTAGCTATTACATATATTGATTTATTGATCATTTTTTTCTCCTTCCAATTCCTTTAATGTTTTTACAAATTCTTCTTTATTCTTTATTTCTTCTTTCATATATTTATGTTATTACTCGCACTAATCTAGTAAAGATTCACTTTTGAGGATTTATACCTATGTTATTTCGTATAGACCTTCTTTCTGAACAGTGTCAAATATTTCTTTGTTTTGTA # Right flank : CCTCAAACATAGATTTTAGTGAGTGCTTTAAGCCTCACCATTTGGTTGCAAAATCAACCATTTTATATAAAAATTTTTATTACTATTTATGACTAGCTTCTCAAATTATTTTGTATTTATATTATGCTTTTGACTATATAATCATATAACATTTGCATTTTTAATATTTTTGTTAAGTTATGAATGCATTTTATAAATTTTAATGAGTGTCATATAACCTCACTTTCAGCTGCAAAATCAACTGTTATCTTATTTAGTATACTATGAATTTAGTAATTTTTCTATTTATTTTTATATATATCAAACTTTTTCATAAAAAAAACCAGAGATTTCTCCCTGGTTTTTTGTAACAGATAAATTTTTATGAAGATATTCTGTTAATTCAGTTTTTTGTTATTATTTGCTTTCTCCTATTCTCATAACCTTTCCTGTAGAATCATCTATAGAAAGCTCTTTTTCTAATTCCATTTCATAAAGATACAGTTTTTTTTCATTTACAG # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTATGTTATTCCTCATAGGTCTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 36539-37270 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQK010000022.1 Anaerostipes hadrus strain MSK.13.43 NODE_22_length_48981_cov_226.118, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 36539 30 100.0 37 .............................. TATCCTTAGCGGTCTGAGCATCCGTTTTAAGGATTTC 36606 30 100.0 38 .............................. ACAAACATTACATCGCCGTTTATTGTAGCTGTTCTTAC 36674 30 100.0 37 .............................. AAAAATTATATTGTGATCGATATTGAAACAACTGGTT 36741 30 100.0 37 .............................. TTAGCATTACTTTGTTCATATATCCTCCACTTCTGAG 36808 30 100.0 36 .............................. CATTACGACAGTGGTAATTACACGAATACGCCAGTG 36874 30 100.0 37 .............................. TTGTTTCCGATAAGATTTTCATGCAAGTGTAGTAAGT 36941 30 100.0 37 .............................. TAAGATTGTATAATGTAAGCAAATCTGCCCACACAGA 37008 30 96.7 36 .............................T GAGCAGGAAGCAGGAAATTGAGCATCCCCACTCCAA 37074 30 70.0 58 TT..........T....T.....AA..TTA TATTGGAAATATAGATATGGTATAAAAGTTATTATTAGTTATATAGTAGGCTCAATCT 37162 30 86.7 48 .........C...A.........G.C.... TAAATTTGGGGGGATATTATAAAAAACATGAAAACAGAATTTTTATGG G [37190] 37241 30 73.3 0 A..A........TTT..T..A........T | ========== ====== ====== ====== ============================== ========================================================== ================== 11 30 93.3 40 GAATTAATAGAAACATAATGGAATTTAAAG # Left flank : GGAAGGTGGATGTGTTGGTGAATAAGAAGGATCTGTCTAAGGTTGAGAGGAGTCAAATTGAGGATATTGTTGTTAGGAAGGTGGGGTGCCAGTTGGGGGATGTGGTGATTAGTTCGATTAAGACGGAGGAGTAGAAGTGTATATGGAATAGAGGGTTTGGGTTCTCTCTGGATGATGTTCTTGGGTAATTTTGGAATATTGTTCAGAGAGAATTTTATGTTTATATATGGATTTGTATATTAGGGTTGCATATTTGATTGATTGGATTCATAATAGGAAGTGTCAAGCTAATAAAAAACTTGATATGATAAAAATATAATGATTTCTGTCGACCTGTGATAGTGTAAAAAACGTAGGGAATCGACAGAAGTAAAAAATGGCTAAAATAGGAGGTGTTGCTAAAACATATGATGAAGAGTGAGAAAGAAATGATATATTTTGAAGAGGTCGACAGAATAAAGGTGTTTCGTGGAGTAAATAAGCAGTTGGTTTTGGGACGG # Right flank : TTAGTATAAAAAGTTTTCCAATATGGACGATTAATATTAAATTTCATTGGTATAATTTAAATTTCAATATGAAAAATTACATTGATATTATAATAGATAGATTTACAAAAAGCAATAACAAAATAAAATATAAATATCATTAATATAAGGGTTGACTAAATATAAGTGAAAGAGTATTCTAAAAACAGGAAGGAGAAATAACACCTATGCGTTTAGAATTACAGATGGAATTATTGAAACCAGAGATAGATATTGATTATCGTAGAATCATAATATCTTATCTAAAATTTGCATTAGAACATTGTGAAGGGGGAAGATTTTTCGAAAAATTTTATAAGAATCGAGATAACATAGTTAAAGATTATTGTTTTTCAACAGTTTTTAGTAAGCCACGATTCACGAAAGAAAAAATTTATTTTGATAAAAATGAAATGAAAATCATATTTTCATGCAGTGATAGGAATCGAACAGGATTAATTTTCCAGACAGCATTTTTAGCA # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.66, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGAAACATAATGGAATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 3832-498 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIQK010000055.1 Anaerostipes hadrus strain MSK.13.43 NODE_55_length_10317_cov_255.215, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3831 30 93.3 37 C.....G....................... GCCATATAACCACCTACTTAGCCATTACTTCAAAATG TAA [3813] 3761 30 100.0 36 .............................. GTTGTTTGCTGCTTTGAACATTTCTTCTGATATAAT 3695 30 100.0 34 .............................. AAGATAGTCAATAAGTTCAAATGGATCAGAAGTA 3631 30 100.0 37 .............................. ACTAATGGGAAGACTGACTAGAAAGCCGGACATAAGT 3564 30 100.0 36 .............................. TCAATGTACGCCATGAAATCACTCCTTTTTATCCGT 3498 30 100.0 34 .............................. GGATCAATCGTTGCATATAAGGACTCTCATTAAG 3434 30 100.0 36 .............................. AGCTTTATAAGATTCAAGAGCTTCGATCACACATCT 3368 30 100.0 36 .............................. GCAGATAACCTTTTCAAATGAGGGTAATATAGCAAT 3302 30 100.0 35 .............................. CCTAAAGTGTATTTTAAAATTTCTCTATATTCTTC 3237 30 100.0 35 .............................. CTAATCACCTTTCCTTTTTACAAAATATTAAAATT 3172 30 100.0 36 .............................. CGAAGTAAAAGTAATTGATTGGGAAGCAGGAAAGCT 3106 30 100.0 35 .............................. CTAATTAGAAAAGGATACGACATTTCGCCATATCT 3041 30 100.0 37 .............................. AGATTGATTATGTGCGTTGTACTGGGTTTATTAAAGA 2974 30 100.0 36 .............................. TTGGAAGTATTGATAGAATCCCCTAACACCTTTGAG 2908 30 100.0 36 .............................. GCTATGGTTCGATGGAGTTAAGGACCTTCTGGACGA 2842 30 100.0 36 .............................. GACTGCGATCGGAGACATTCGATGCAAGTCAGGATA 2776 30 100.0 36 .............................. CACGTATGCCACTTTATTTCGCTTTATTCCAATCAT 2710 30 100.0 37 .............................. TGAATGTAACCGAAATCATTACGGGAACGCGTATGTT 2643 30 100.0 36 .............................. CGTTACTCGGAACGAGTGTTGAAGAGCTAAAAGAAA 2577 30 100.0 37 .............................. TAGAAAGCTTAAACCAGTATGGAGAAAGGAAACAGAA 2510 30 100.0 35 .............................. GATTTTTGTATCGCAACATCTAACAATTATGTTTC 2445 30 100.0 37 .............................. AGATGAAGAAAAGGAGGAAAAATAAATGTCAGCAGCA 2378 30 100.0 35 .............................. GAGATTCAAAATGCTATCAATTCGTTAGCGTCTAC 2313 30 100.0 38 .............................. GCACAGTTTGAGGGTATATTTAATGTTACGATACCAAT 2245 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 2180 30 100.0 36 .............................. GATTGAATCTTTTGAATATGGAGAGGAAGATAGTAC 2114 30 100.0 37 .............................. ATAAATTACATATCAAATTTACGATCATAACGGACTA 2047 30 100.0 35 .............................. TCCGGCTCTGCTTTCTTCTTAATTGGATCAATAAA 1982 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1914 30 100.0 38 .............................. ATAGTTCTTGTTCCCTGTCAGTCTTATGTGACTTTCCA 1846 30 100.0 36 .............................. AAAAATAGCAGAAGAAGCAAAAAAACAGTGTATAGA 1780 30 100.0 36 .............................. AGAAGATAAGATTAATCATACGACAGAGTTAGACGA 1714 30 100.0 35 .............................. ATGATGATCGGGCGGAGTATCAATCTATCTGCGCT 1649 30 100.0 36 .............................. AATGAAAGAATTAGAAATGAAGGAGGACTTAAACGA 1583 30 100.0 35 .............................. AGCTTGCAACGGTGATTGGAATGCGTATCAAGGTC 1518 30 100.0 35 .............................. CGGATTAGCAGCCAGTATCGCATCTGTAATTATGA 1453 30 100.0 37 .............................. AAAAAAGGAGTAAACGTTGAGTGACTATATTTACATA 1386 30 100.0 36 .............................. TATGAGCGAGCTGATGAAGAAATACGGCTACGAGAA 1320 30 100.0 36 .............................. GTATTGGCTAGCGTAGTTGCCTACTACCTATGCAAA 1254 30 100.0 36 .............................. AAAAGATGCACTTGTAACTCAATATGCCGAATTGAA 1188 30 100.0 35 .............................. TTACTCATATCTTCTTTCAAGACATTTAAAACCAA 1123 30 100.0 35 .............................. CGAACGCTGTGATCGATTACGGACGAGAAAAAACA 1058 30 100.0 39 .............................. CTATCCTCATATTCACAGCCTTCATCAGCATAAGACTCT 989 30 100.0 36 .............................. CTCTGATCACGAATTGGCGGTGCAAATACCTTGTAC 923 30 100.0 36 .............................. ATATACGAAGTAAGCATCGGGAACGATGATAATTAT 857 30 100.0 37 .............................. GATGGAAATGCAGCAGCTACAAGCTCAATGTCATTTA 790 30 100.0 37 .............................. CTTCTGGAACAAAAAAACAAGTTGTAATCCCAACACT 723 30 100.0 36 .............................. AGGAGCTTCAGGAGAAGTATGATCTTCTTGATGAAA 657 30 100.0 35 .............................. AATTTACATCTAACACAGTTTGTAGATTATTTCAC 592 30 100.0 35 .............................. GTCTTTTCCGACTGATCAACCTTGATTATTTCATC 527 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 51 30 99.9 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGATGCGAAATTGCAGATTTTGTTACCCCCAGTAGCACTGCAAGATCACATACACACATCTCACTCTGTTCTAGAGCGTGTAAGATTTGTACTCTAGTTCCATCTCCAAATAGCTTAAACAAAGAAGCCAACTGGATATAATCATCTTTTGGCTGCATCTTGGATTTCACATCATTCACAATATCCTCATGAATTACATCGCAATTACAAATATAAGACGTTTTTGGCATATATTCACCTCCAAATAATAATAGTTGAACAATTACTCAACTATTATTATACTTATTTTTAAATTCATGTCAATAAGCTGATGTTAGTTCCCCATAAATTTTACAATTAAAACCAGCTCTTTATTCTTTTCTTTATCACATCTCATTTCTGGATTAAACGCTTATTTTAATTATCAGATTTTTCCTTCTAATCTATATTCTTAAGGTTCCAGTTGACTCATTTGGTCCCAAGTGCCTTAAGATTTCCAACCTGTTACATTGAAATCCAT # Right flank : CCCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTTCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCATGGGTCGACAGAAACCCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACGGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATTA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //