Array 1 1030491-1035276 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056269.1 Citrobacter sp. RHBSTW-00881 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1030491 29 100.0 32 ............................. TCGATAGCACTTTTAATGGTCTGGTCGGCATG 1030552 29 100.0 32 ............................. CGCACAGACAGGTAGGTATATGACTTAGTCGA 1030613 29 100.0 32 ............................. CTATCAGTACGAAACGTGAGGCCGACCAGGCC 1030674 29 100.0 32 ............................. CTGGGGTTACGCCACGTGGAGATCGTCCCGCA 1030735 29 100.0 32 ............................. ATTTAACACGCATTGCTGCTCAGGTTGATCCG 1030796 29 100.0 32 ............................. ATATCGGGCGAACCCTGATAAATCATGGTGGT 1030857 29 100.0 32 ............................. CGTGTCAGTAACTGCGCTTGCGTTGACACTGG 1030918 29 100.0 32 ............................. GCTGGAGACATTCTAGCCCTATGGGAGTGGGA 1030979 29 100.0 32 ............................. TCACTGTTGCGCATCATTTTTATATATTCTAT 1031040 29 100.0 32 ............................. GACCATACTGGAAACATGAGATTGTTAACATT 1031101 29 100.0 32 ............................. GTGGCAGTGCAGATTTCAGGTCATCCGGCATC 1031162 29 100.0 32 ............................. TCGTGAATATGCGCCCCTTCAACATAGTCAGG 1031223 29 100.0 32 ............................. GGATGCAGCAGGCAATGATGAGTTGCTTTTCG 1031284 29 100.0 32 ............................. GTGCATCGCCACCGTCCTTCTTGAACAGGACG 1031345 29 100.0 32 ............................. TGCTCCCATTCCCCCTGGGTCATTACTTTTTT 1031406 29 100.0 32 ............................. TTACCGCGCACCTCGATTTCCCACGTCCGGGC 1031467 29 100.0 32 ............................. CATTCAGTCAGACCCCTCTGGGTTTGACCCGG 1031528 29 100.0 32 ............................. GAGACCCGACCATCGAAACGGTAAAATGTGCG 1031589 29 100.0 32 ............................. CACGTAAACGGTGATAAATGGCAACGATTTCG 1031650 29 100.0 32 ............................. AATCCCAGGCGCTAACGTATAGCGGACGTCTG 1031711 29 100.0 32 ............................. GGGTACATCTGTTACCCAATCCTCGGTACGAT 1031772 29 100.0 32 ............................. ACCGCACCCTATACATTTGAATTGCGTGATGA 1031833 29 100.0 32 ............................. AACGGTCAGAATTAAATCGGCACTGGCGCTAA 1031894 29 100.0 32 ............................. GATTTTAGCTGGTCTGCTGTGAGTTCAGCAGC 1031955 29 100.0 32 ............................. ATCTGCCGGATCTATCGCAGCCTCTTGTTGTT 1032016 29 100.0 32 ............................. TGTTCTGCTGTTTCGATTTCTTCGGTGATCCG 1032077 29 100.0 32 ............................. CAACTATATCGCAAGCCAGGTGGGAAGCTGAT 1032138 29 100.0 32 ............................. AGACTACGTTGATTATCGGCGGGTTGTCTCCT 1032199 29 100.0 32 ............................. GGACCCCATTGCAGTTCTATATAGCTTGATCA 1032260 29 100.0 32 ............................. TGTTCGTCGACTCGCAAATGTCCTATCGGGAA 1032321 29 100.0 32 ............................. GAAATGGCTCTGCCTAAACGCTGCGTTGCGCT 1032382 29 100.0 32 ............................. GTCCGGCACGCTTTATGGCGTAGGCGATTGCG 1032443 29 100.0 32 ............................. TGCCCATGCGCTGCATTGCCAGCTTTCGGGCT 1032504 29 100.0 32 ............................. GCCTACAACTGGACAGGATTTGATGTTTTACC 1032565 29 100.0 32 ............................. TGTGCCTATGACCCCGACACGGGTAATCGGTA 1032626 29 100.0 32 ............................. CGGCTTAAACAGCGTGTCCGAGGGGGTGGGGT 1032687 29 100.0 32 ............................. GGGATTGTTAATTTCTGCAACCTTTGTTGCTT 1032748 29 100.0 32 ............................. TGACACGCTCCATCAGGTCAAAACGAACCGCT 1032809 29 100.0 32 ............................. CACCTGCAATTGCAGCCAGCACAGCAACAGCC 1032870 29 100.0 32 ............................. CCGTGGGTCGCAGGTTCAAATCCTGCATGCTA 1032931 29 100.0 32 ............................. TATCCACGGCGCTTTACCTTTGCTGTTCCGGT 1032992 29 100.0 32 ............................. GAATCAGCGCCATGCCGTACTTCTCTTGCTCC 1033053 29 100.0 32 ............................. TATTTGCTCGACCTTTGCCTCAAGCTCCCACT 1033114 29 100.0 32 ............................. TATTTGCTCGACCTTTGCCTCAAGCTCCCACT 1033175 29 100.0 32 ............................. GCTTACCTCCTTAGCGACACAGCCCGCATACT 1033236 29 100.0 32 ............................. GTTCCCGGTCGCAGCGGCTTTAAATACACCAC 1033297 29 100.0 32 ............................. GATTGTAGTATATTTTGGCATCCGCTATAGGT 1033358 29 100.0 32 ............................. GCAGGTTGCCGATCGTCTTACGCGACGCGATC 1033419 29 100.0 32 ............................. CCAGCATGTGCCCTGGCTGCGTGAGAATCCCG 1033480 29 100.0 32 ............................. GCGAGGGGCTATTAGTTGCCACTGGCGATCAT 1033541 29 100.0 32 ............................. TACGTATCTTCACTCTGGACGGCCTGAAAGGG 1033602 29 100.0 32 ............................. GTGAACTTGATTGCCGCGTCGAATTTCGCACC 1033663 29 100.0 32 ............................. GCAACGCTGGGTAATCCACAGGGCGGCTCCTA 1033724 29 100.0 32 ............................. ATCACCGCGACGGTAAAAGATGCTGCTGTGAA 1033785 29 100.0 32 ............................. AGTAAATTACATAGAAATCTGGTCATTATTCG 1033846 29 100.0 32 ............................. CGAACCGGCCTGGCGTAATGCGTGGTGCAGGT 1033907 29 100.0 32 ............................. GTGGGCGGTGTGGGTGTGGCCGGGCAGATGAT 1033968 29 100.0 32 ............................. ACAACGGCGGTTACGTTTTTCTACAGAGTCCT 1034029 29 100.0 32 ............................. AATTATTAGATATTGAAAATACGTTAATTGAC 1034090 29 100.0 32 ............................. GCTATTGAATTTATTTCACTGTCTTGGCCTAT 1034151 29 100.0 32 ............................. CGAAACGCCCAGGAATTAGTAGACCGCATGAA 1034212 29 100.0 32 ............................. GGGTGGGCAAATTTCTTCGGGGATAGCTTTGA 1034273 29 100.0 32 ............................. GACCAGGCCCGCGCCGCCCTGAAACTACTGGA 1034334 29 100.0 32 ............................. TATCAGGCGCTACTAATCTAGCCGAGTATGGA 1034395 29 100.0 32 ............................. AGACTGATGACCTCGCCGCCGGCCATATTGCT 1034456 29 100.0 32 ............................. CCGCACACGTCGATTAGAGAGGCAATTGACGC 1034517 29 100.0 32 ............................. GTGATGGACGTGGCGATCTGCTTCATCTGGCT 1034578 29 100.0 32 ............................. TCAACAAGCTGGGGCAGGAGTTCCCGGGACTC 1034639 29 100.0 32 ............................. CAACATGGGTTGGATGTGCAGGCTTTGTGGGG 1034700 29 96.6 32 .G........................... GGACTCTAGCAGAGTCCCTTTATTAGTTTTAT 1034761 29 100.0 32 ............................. CATGGCTGTCAGTCTCAAAAAAATTTCATCCT 1034822 29 100.0 32 ............................. ACATTTTCACGACAGGCGCACGCCAAAACTTG 1034883 29 100.0 32 ............................. ATCAGAAATACCAGGTTATCTACCGGGGACAG 1034944 29 100.0 32 ............................. ATTACAAAATTTATCACGAGGGCAATCTTACG 1035005 29 100.0 32 ............................. GGGTGCTGTACGGGGTGCTAACACACACAAAA 1035066 29 100.0 32 ............................. ATTGAGGACGTTCAGGCGCAGCTCTACGAGGC 1035127 29 100.0 32 ............................. ATTGAGGACGTTCAGGCGCAGCTCTACGAGGC 1035188 29 100.0 32 ............................. ACCAGTGGTTCTCCTCCTTTATGCTGCGTATC 1035249 28 89.7 0 .................-.......T..A | ========== ====== ====== ====== ============================= ================================ ================== 79 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAATCTTTTGCAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAATTTTTTCTACGGCTATAACCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGTGGTTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTTGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCAGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //