Array 1 536-42 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ACVQ01000033.1 Campylobacter showae RM3277 contig00005, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==============================	=====================================	==================
       535	    30	 100.0	    37	..............................	AAGAATTTAGAGCCTGAAGATGTCCCCAATGATACGC	
       468	    30	 100.0	    37	..............................	GGCTTGACGGCTGGAGCTGCAATAGTAAGCGACGCGG	
       401	    30	 100.0	    36	..............................	AGTTATGAAGACGAAGAGGGCGACAATAATATAGGT 	
       335	    30	 100.0	    35	..............................	GTCGATGCTGGCCTATGCGAAATGAAAGAGCGCTA  	
       270	    30	 100.0	    36	..............................	CTAGCAGGATGCGCGGGCAAAGATCCGCAGGTTATA 	
       204	    30	 100.0	    37	..............................	AATGCCTTAGCCGCTACGCTCGCCGCGTCCTCGTAAA	
       137	    30	 100.0	    36	..............................	GGTTTTTGCCTACGGCCTGCGCGGCTAGAGCTATGC 	
        71	    30	 100.0	     0	..............................	|                                    	
==========	======	======	======	==============================	=====================================	==================
         8	    30	 100.0	    36	GTTAAAATTTACTCCGTTGGAGTTTGAAAC	                                     	       

# Left flank :   CGCAAGGCTTGGCGAAACGATCTCGCTGGGCGGGCGCGATCTCACGTGGCGGCAGGTGATCCGCCGCGAAGCTAATCAGATCAAAAAATGTATCTGCGAAGATGCGCCTTACGAGGGATTTAGGTGGGGGTAAATTTGATATTTGTCGGTAGGGACAGCAAAAGGTCGCGGTTGCATTTTGATGATTTGATTTTAGTGTCGCTACTTCATTAAAATGCGGCACAAAAATCGCTACTCATTTGCGGTCAAATTTGACTTATGCATCTTTGGGTATGGTGTCGGGTTGGGGGGGCGCTAGCTTACTTTTGTTGCGGCGGGATATTTGATTTCTAAGTGCCTTTTTAAATCCAAATCATGTCGATAAAGCTTTTTCTAAGATTTTAGAAATGATGAAATTTAGGGCATTTTGTATCGATATTATTTTGCTTTTTATGCAAATTTAAGGCGTAAAAATATAGACTTTGAGTTTTTATAGTCCTAAAAATGTATATTTTGGTGCT
# Right flank :  CTAAAACAAGAAGACGCCGCCCCTCCCGAGCTCCCGTTAAAA

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTAAAATTTACTCCGTTGGAGTTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-3.70,-4.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [31.7-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.64   Confidence: HIGH] 

# Array family : NA
//


Array 1 79325-79096 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ACVQ01000008.1 Campylobacter showae RM3277 contig00105, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	==============================	=====================================	==================
     79324	    30	 100.0	    37	..............................	TCGTTTTTGAGCATACTAATAACTATCACGTGCCGCT	
     79257	    30	 100.0	    34	..............................	CACTATATCTTAAAACTTCCCAAAACTTCCAAAA   	
     79193	    30	 100.0	    37	..............................	CAAACGGTGCTAAAGCTTGAGCGAAACCCATGATATA	
     79126	    30	  93.3	     0	...........................TG.	|                                    	T [79098]
==========	======	======	======	==============================	=====================================	==================
         4	    30	  98.3	    36	GTTAAAATTTACTCCGTTGGAGTTTGAAAC	                                     	       

# Left flank :   TTTACTCCGTTGGAGTTTGAAACTTTCTTTTACGTCCTCTATCCAGGACTTGTACG
# Right flank :  AATCAATTTTTGCGGCTTAGTATGCTGTGCGATTGATTATAGACGGGCGACAAAATATAAAGTTGCAATAAATAATTTATGATTTTCTGTTAACTTAGCTAACAGCCTACCGGTTGATTGCCTGCAAGCAGTTTTTCTAGCTTGCGATTTTTAAAGAATTTGACGACGTCAAACGCAATCTTGGCAGCCAAAAGCGCCAAAAAAAAGTGTCTAAAAGCATAAAATTTGCCTAAATATTTATGCTTTTTCATGAGCTTTAGAGCGAGCGATTTTATCGCTTCTATCGGCTTTTTGATTGCTTCGCCGATCATTTTGTCCTTTATCTCGTGGACGACGAGAGCGGTGATGGTTTTTAGGTATTTTTTAGTTTTGGGCGCTGGTAAATTTTGCGTCGCAGTTTCTCCGTAAACGCCGTCAATCCAAGCTTCAAAATTTTGTCTAGCGTTTTTGCTTTTTAAGAGTTTTTCGCCAGCTTTGCTTATCTCGTAAATCCCGCGCGA

# Questionable array : NO	 Score: 2.77
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTAAAATTTACTCCGTTGGAGTTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-3.70,-4.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//