Array 1 3113-191 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNNN01000327.1 Vibrio parahaemolyticus strain B6_6 B6_6_contig327, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3112 28 100.0 32 ............................ TGTTCTTGCTTGCCGCCGTGGTTCAGTGGTGA 3052 28 100.0 32 ............................ AATAATCACGAAGTCGAACGAACTTATTGAAC 2992 28 100.0 32 ............................ TTTCTAGTTGGTTGTCGATAATAAAGACTTTA 2932 28 100.0 33 ............................ ATTAAAAGCTATGATCTCGTGCCCCGTCTGCTT 2871 28 100.0 32 ............................ AGTAGAAGGCACTCTGTAACCGTGCTCTCTAC 2811 28 100.0 33 ............................ ATTAAAAGCTATGATCTCGTGCCCCGTCTGCTT 2750 28 100.0 32 ............................ AGTAGAAGGCACTCTGTAACCGTGCTCTCTAC 2690 28 100.0 33 ............................ AAGATAATCCCGATGATTCTATTGATTATTTAA 2629 28 100.0 32 ............................ ACTAAAAAATACGCGGAACTGTGTGAGGCTGC 2569 28 100.0 32 ............................ AACGAACTTTTACACGTTCGATTTTTTTAACC 2509 28 100.0 34 ............................ ATAAAACGCCAGATTCAACAACTAACTCATATCC 2447 28 100.0 33 ............................ AATCAATTCATTTATTTTATCTTCTGGTATTCC 2386 28 100.0 33 ............................ AATCAATTCATTTATTTTATCTTCTGGTATTCC 2325 28 100.0 32 ............................ TGTCTTATGGTTTGTATGACAGCCGTTTGCAT 2265 28 100.0 32 ............................ ACCGAAGCCGCCGCGTTTATCCAGGCCGAAAA 2205 28 100.0 32 ............................ TATAAAAGGTGCCATATGCGCCTTTCATCTTT 2145 28 100.0 32 ............................ ACACGGCAAAGGCAGAGGATAGACGCCAGATT 2085 28 100.0 32 ............................ TCATTGGATTAATCATGAGCAAACGCCAAACC 2025 28 100.0 33 ............................ ATACCCGCAAAAAGGTGAGCCGGTTGGTCTCTC 1964 28 100.0 32 ............................ TATTTATGTAGATGAAGTTATTCCCGGCGATT 1904 28 100.0 33 ............................ TTCTCGCGACGTTCGGCGAGTTCTATGTAGTAC 1843 28 100.0 32 ............................ AGCATACCACCCGGCCACGGATAGCCCTCGGC 1783 28 100.0 32 ............................ GTTACATGAAACATTAACTAAGGATAAGTTAT 1723 28 100.0 33 ............................ AAGAAACCAGATGGAGCAAGGTCATTGGTATGT 1662 28 100.0 32 ............................ GTTGTCATTGAATGCAATCCCGATTTTATTCA 1602 28 100.0 32 ............................ TACCGGAGATGGACAAACTTTCCGACGCTTCC 1542 28 100.0 32 ............................ ATAATTACCAGCCTCAGAACCAGAAACTTGAG 1482 28 100.0 32 ............................ GCTTCTATGGCTACTATGCGTTATTGCATTAA 1422 28 100.0 32 ............................ TTATTAGAACTTGAACTTTCATCATCAATACC 1362 28 100.0 32 ............................ AGACATTGAACAACTGGCAGAAGTTGGCGACT 1302 28 100.0 33 ............................ AAAGTAAACGATACGGAACAAAGAAATAATGAA 1241 28 100.0 32 ............................ AACCAATTTACTTGATGCCGATATTGATTCGA 1181 28 100.0 32 ............................ TACGCTTTAAACGGAGGTAATCCAATGAAAAA 1121 28 100.0 32 ............................ TGGACAAAGGGAAGTGGAGACCGACGACTAAA 1061 28 100.0 32 ............................ GTAACGCGTTCAATGATGAACCGAACGGCTCC 1001 28 100.0 32 ............................ AAATGGACGCATGCGGAGCCGTACAAAATAAC 941 28 100.0 32 ............................ AAAGATTCACCTTTTGAACTCGAGTGATGATA 881 28 100.0 32 ............................ ATGACAATTGCGTTATAAATGGTCGTACCGTA 821 28 100.0 32 ............................ TCGGACAAGCATTGCTGAGTGACACAGTTCAC 761 28 100.0 32 ............................ TGTCGGCGGCTTTTGTCTTGCTCGCAAGCGAG 701 28 100.0 32 ............................ TTGTCGAACATCCGCGTTCCAACCGAGTTTAG 641 28 100.0 32 ............................ ATGCTTACGTGGTTTCTAATGGCAGCAAATTT 581 28 100.0 33 ............................ TGTAATTTTATCAAGTTGCTCAAACTGATAATA 520 28 100.0 32 ............................ GAGTTCAAGTCGGAGGTCGGTCTAAGTAGTTA 460 28 100.0 32 ............................ AACAATAGGCGCGTCACCAGAAAGTGACAACG 400 28 96.4 32 ...........T................ GACAGACTGTGTTCCCAAATTGCTCATCAATC 340 28 100.0 34 ............................ ATCATCGATTAGCGTTGAGCGCTATGTTGATTCA 278 28 96.4 32 .............C.............. TGCCCGTTGTTGTAGCGTTGACCATGCATCTA 218 28 89.3 0 ..........A..C............G. | ========== ====== ====== ====== ============================ ================================== ================== 49 28 99.6 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : GAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTCAAATCCCCTGAGCGAATTGAACGCGATATGCAGAAAAAAGCGGAGCTTTGGGCGGCTAAATCTGGCAGGTCATTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTCCATTACCGTTTATCTATTTACATAGTCAACAAACCAAACAACGTTCACCGGATAAGAGCAGCAAATTTCCGTTGTTTATTGAAATGAAAGCTATCGGAGTAAAACAAGAAGGTTATTTCGACTGCTATGGGCTGAATTCCAAACTTAATCGGCAAGATTGCTTAGGGACTGTTCCGCAATTTTAATCAATAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATAGGTATAAAATACAGCTAGTTACAATAGATAGATTTTGACAAGGTAAAAACATGATTTTTATCCTATCTATCTGTTGTAACTTTCTTTTATTGATTTATTCTGTT # Right flank : AGGCTGAAACGGTGTCCTCAAGTGTAAGCTTTATTCATATCGAGAGCTTTACGCTAAGTCGTAAAATTTAGATTTTATTCTCATAATATTTAGCCAAATAATTTCCTACATTAAGTTTAATAATAACCTTACTTAAAGGTATTTTTTATTTTCCATGTAGGGTAATAAATTTTTTGAAGTGTTACGAAAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //