Array 1 36446-37496 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKO01000017.1 Streptococcus canis strain FU53 ScFU53_contig17, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================= ================== 36446 36 100.0 30 .................................... GTTGTTGTTGATAAGATTGTTTATAATGAA 36512 36 100.0 30 .................................... ATCAGCGTTCTAAACAGAGCAAACCCGTAA 36578 36 100.0 30 .................................... CTTCGATAGAGATGACATTCGAGAGTTCTT 36644 36 100.0 30 .................................... GGGGCAATGTCAGCTAAAGGTTTGGCTAAG 36710 36 100.0 30 .................................... ATAAGGAATTTGAGCAATGGTACAAGAAAA 36776 36 100.0 30 .................................... TTCTTGGTTTTTGGTTTGAGCTAACAAATT 36842 36 100.0 30 .................................... AATGAAACGCTAATTCGTTTCAAAATCCCT 36908 36 100.0 30 .................................... TCGTGCCTCTGCCCAGCCCCGCGGTCCACC 36974 36 100.0 30 .................................... TAATATATAACTTGGCTAACGACATGGTCT 37040 36 100.0 30 .................................... TCAGACGCTCAAATGCTATCAGATTTGATA 37106 36 100.0 55 .................................... TCCAGACCCCAACGACTGGTTAAACCGCCTGATCAAGGTATATGCTAAACGTTTC 37197 36 100.0 30 .................................... GTTAAATCCTCCTTTGACGGCAATTTACCG 37263 36 100.0 30 .................................... CATGTTACGACACTTTGTCTCATTAAACGT 37329 36 100.0 30 .................................... TAAACCAGCTCGGGTTTCATCAATGAATTC 37395 36 100.0 30 .................................... GTAAAGTGAGGTCATCACTCCATTTTTCCA 37461 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================================= ================== 16 36 100.0 32 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAAGGGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTCTATAGGTTTTTTGGCGTATAATATAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTTAAAAGGAGGAAGAAAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTCAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 209974-209145 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKO01000006.1 Streptococcus canis strain FU53 ScFU53_contig06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 209973 36 100.0 30 .................................... AGTGCTAAATCAATCATTTTATCATATTGT 209907 36 100.0 30 .................................... TTGTTCTACCAACAACGCTTGGTCTGGTCT 209841 36 100.0 30 .................................... TTTCCTTGATAACTTCTGGTCTAGGGACAT 209775 36 100.0 30 .................................... TCGTCTCCTTCATTCATTGAATCTACCAAT 209709 36 100.0 30 .................................... CAATATTCATGCAAAGGGCTGATGGTACAT 209643 36 100.0 30 .................................... TAGCAAACCAGTTGAGAGACTAGCGCTCAA 209577 36 97.2 30 .......T............................ TGTTGGTAGTAAGGGTAGGAGCTAAGCCGT 209511 36 100.0 30 .................................... ACTTAACGTTTTACAAAGTTGTATTTTACA 209445 36 100.0 31 .................................... TTGCTTCTACAGTTACTAACACATTTCGATA 209378 36 97.2 30 .................C.................. TTATCATCAGAAAAAATAGTGAGAACCAAC 209312 36 100.0 30 .................................... AGATTGCCAGCAAATTAACCGAGCTTGCTG 209246 36 100.0 30 .................................... GGTGTTGGTGCTTTGTTTTTCAATATCTTA 209180 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 99.6 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGTGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAAAATCACGGTTACCAATATGTTCGCCAAATTTCAAGTGTAAGTTAGCCAGTCTGTAAAAACTCTTTAGGAGATTTGTAATCAAGTAGTTTCTTTGAGTAGTTATTAATCCCATTTTCAATAAATGCGGCTTGTTGTTGAGTCGCATTTTTACGTCTCTTTGGTAATCAACGCCGAATGAGTCTGTTGTGATTTTCATTAGTTCCTCTCTCCCAAGAAGAATAGGGGTGGGCATAGTAGATATAATCAGGATCAAAAACTTCTGCTAAACAACTAAATTCAGTGCCATTATCAGCAGTGATAGAGTTAATCTGATAGACTTCAAGGCTTGATTCACTGAAGAAGCCGATTTATCAGGAATAAGTCGAGTGATTTGGTAGCGGCTTTTTCTGTCTGTCAGCGTCAGTAGACACTCGTTTTTTCCCGAGTTTGAATAACCGTATCAATTTCAAAATCACCGCTATGCTCACGATTGTTAATGCTTTCAGGTCGCTCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 17937-20158 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLKO01000018.1 Streptococcus canis strain FU53 ScFU53_contig18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 17937 32 100.0 35 ................................ ATTTTGTACCTCAGTTAATCTCTAAAACTTCCAAT 18004 32 100.0 36 ................................ GATTCCTTCGGCGCAGTAACTAGCAAACTTAGCAAA 18072 32 100.0 33 ................................ CCTGTTTCAGCAACATATCGAGCATGCCAATTA 18137 32 100.0 35 ................................ CCAGATGAAGCCTTTAACCGAGCAGCAGGGGTCAA 18204 32 100.0 34 ................................ TATGACTTTGACAAGCTAACGACTGGGCTTCATG 18270 32 100.0 35 ................................ TTGTACCCATTTTAACAGAAATTGAGGTATAAAAC 18337 32 100.0 37 ................................ AATAGAGAAAAAACTATACGAGTACAAAGTTTATGAG 18406 32 100.0 34 ................................ CAATCAACAGCACCGCTTTTAACTTGATTAATCG 18472 32 100.0 33 ................................ GTTAAGCGTCTCTCTAGCAACTTTATCCCATTT 18537 32 100.0 36 ................................ CCTGATGAACTCGGTAATATGTACACCGATATTGAC 18605 32 100.0 34 ................................ GTTCGCTAACTGGACGACCCTGTTTTGTAGCTTG 18671 32 100.0 35 ................................ TTTGATACAAAGTAAAATAGAAGAAAGAAAGATGT 18738 32 100.0 35 ................................ ATGGAAGACTTGCCAAAAAAGGAGCATCAGTTGTT 18805 32 100.0 35 ................................ TCATCTTACTCCTTGATTTGTGACACATTCATCAG 18872 32 100.0 34 ................................ AAAAATATCAGGTTTACATGGATAAAATTCACCA 18938 32 100.0 34 ................................ CACATCAAAACCAACAGATGATGAATTAGAAAGC 19004 32 100.0 34 ................................ ATCTATGATGAAAAATATAAAACGTTGAGCAACA 19070 32 100.0 34 ................................ ACTACTCCGCGCTGGAATATTGTCCATCTTCAAG 19136 32 100.0 35 ................................ CTTTTTCTTTTATTATAAGGAACAGGTTTGAACGG 19203 32 100.0 34 ................................ ATATCAGACCATTGTGGAGACTTAACGAGCGACC 19269 32 100.0 34 ................................ TAGTTGTTTGATTAAATCCTCTGGCATATTTTTC 19335 32 100.0 33 ................................ TTTTTCGGATACCTTTTTGTCGAAGTTGAGGTC 19400 32 100.0 34 ................................ TTTTTGTTCTGTGTCCATTACCTCTATTAGCTTT 19466 32 100.0 34 ................................ ATACGAAAGGTTATCTAATGGTATTAGAAAAATG 19532 32 100.0 35 ................................ AATATAAGTTTGTCCAGTCTGTTTCTCACAGTGTC 19599 32 100.0 34 ................................ CTTAAGCTTGATTATATTATAACTCTGTGTTTCT 19665 32 96.9 34 ........T....................... AAAGAAATAATCATGAGCACGGCTATTGTTTTCT 19731 32 100.0 35 ................................ AACTTGTACGTATAAATCCTTGGCTTCGTTAGTTA 19798 32 100.0 34 ................................ TTCAAACTCTTCGGTTTCTACGTTACTATCTTCT 19864 32 96.9 34 ........T....................... CTGCAACATGCCACGGTTAGTCAACTTGATTTTT 19930 32 100.0 34 ................................ AAGAAAAAATGCGGAACAAGAATTTTGGAATAAA 19996 32 100.0 33 ................................ AACTTCTGCAACTCAGCAACACTTAAGCCATCG 20061 32 100.0 34 ................................ TCCAATGTAAATACCTTTGAGTCGGTTAGCTGGA 20127 32 81.2 0 .....................AC...A..CTC | ========== ====== ====== ====== ================================ ===================================== ================== 34 32 99.3 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCTGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGAGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGCCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CCTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //