Array 1 226435-227196 **** Predicted by CRISPRDetect 2.4 *** >NZ_WEOD01000003.1 Pediococcus acidilactici strain FAM19464 FAM19464_scf0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 226435 36 100.0 30 .................................... GGAGTTTATTTCACGTTCATATTGGAATCA 226501 36 100.0 30 .................................... TAATCTTGCACGAAAATCGGTAGGTACTCA 226567 36 97.2 30 .............A...................... TAATCACTTTCAGTGTTATCTAATTCCAGC 226633 36 100.0 30 .................................... TAATAAATACATTATAGTTTGTAATGTAAT 226699 36 100.0 30 .................................... AATCCAATTAATACACTGGCTCCTTGCGTT 226765 36 100.0 30 .................................... AACGCAGGCAAGAAAGTAGAAGAAGCAGTG 226831 36 100.0 30 .................................... CGTTCAGTATTCTGTTCTCCAACCATTTCT 226897 36 100.0 30 .................................... CAATTCGGTTTAAAAATGAACTCAAGATTA 226963 36 100.0 30 .................................... CATTTTGCGAACAGCGGATTATTAATGTAA 227029 36 100.0 30 .................................... CTGAAAAATGGTTGTTAAATCCAGATAATT 227095 36 97.2 30 ..........T......................... TTGCAAAGAGACAAAAAGCCTACAACCATG 227161 36 94.4 0 .................G................A. | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.1 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGAGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAATGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAGCTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGTAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAATTTTCAGTTAGAAAATAACG # Right flank : CTGACTGAAATTAATAAGAGTTAACGTTTTAAGGAAGTTATCAATAGTATTAGTAGTGAACTTTGAAGAATGGAATTTTAATGAAACTACTAGTTACGGAGAATAATAAACTACTAAGGTTCAAATGAATTTATAGGTTTAGCATTATTACTCGAAGACGACGTTTTAGTGGTGGTTGGAAATAAAATCCACTCGAAACGATCGGGTGGTTTTCAGTTTGTAAAAGTATACCAATATATTGATATAGTAAATGCATAAAGTTAAGAAAGTGATAAAAACTGGATGATGAAGAATAAAAAGGCATCGCAATAAGCAAATGACAATAGTGACACTAATCATTCAGACGATTACAGATATTGTACAACTCATCACAATGCTTAAAAAATAGGTAAAAGAGGCGATACGTCTCTCTTCTGTTCATCAATTTTAAAATGGAGGCATTAAAATGAAAAACATAGAAAAACTACAATATTTAACTTTGACTATCAGTGTCGTTGCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //